RNA–Protein interactions for RNA: ENST00000488128.6

COL16A1-214, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 2,854 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-214ENST00000488128 ARHGEF10O15013 1369 aa16.84■□□□□ 0.29
COL16A1-214ENST00000488128 NR1I2O75469 434 aa16.84■□□□□ 0.29
COL16A1-214ENST00000488128 KRT85P78386 507 aa16.84■□□□□ 0.29
COL16A1-214ENST00000488128 RIMS1Q86UR5 1692 aaKnown RBP16.83■□□□□ 0.29
COL16A1-214ENST00000488128 ZNF165P49910 485 aa16.83■□□□□ 0.29
COL16A1-214ENST00000488128 BICD2Q8TD16 824 aa16.83■□□□□ 0.29
COL16A1-214ENST00000488128 CYP46A1Q9Y6A2 500 aa16.83■□□□□ 0.29
COL16A1-214ENST00000488128 TAF6LQ9Y6J9 622 aa16.83■□□□□ 0.29
COL16A1-214ENST00000488128 CEP170BQ9Y4F5 1589 aaPredicted RBP16.83■□□□□ 0.28
COL16A1-214ENST00000488128 CCDC30Q5VVM6 783 aa16.83■□□□□ 0.28
COL16A1-214ENST00000488128 FILIP1Q7Z7B0 1213 aa16.83■□□□□ 0.28
COL16A1-214ENST00000488128 ERCC4Q92889 916 aaPredicted RBP16.83■□□□□ 0.28
COL16A1-214ENST00000488128 TPM3P06753 285 aa16.83■□□□□ 0.28
COL16A1-214ENST00000488128 ZNF75DP51815 510 aa16.83■□□□□ 0.28
COL16A1-214ENST00000488128 SPATA32Q96LK8 384 aa16.83■□□□□ 0.28
COL16A1-214ENST00000488128 IGSF1Q8N6C5 1336 aa16.82■□□□□ 0.28
COL16A1-214ENST00000488128 TOPAZ1Q8N9V7 1692 aa16.82■□□□□ 0.28
COL16A1-214ENST00000488128 RAB11FIP3O75154 756 aa16.82■□□□□ 0.28
COL16A1-214ENST00000488128 FGD1P98174 961 aa16.82■□□□□ 0.28
COL16A1-214ENST00000488128 SMTNL1A8MU46 457 aa16.82■□□□□ 0.28
COL16A1-214ENST00000488128 HOXC9P31274 260 aa16.82■□□□□ 0.28
COL16A1-214ENST00000488128 FEZ1Q99689 392 aa16.82■□□□□ 0.28
COL16A1-214ENST00000488128 ZNF215Q9UL58 517 aaPredicted RBP16.82■□□□□ 0.28
COL16A1-214ENST00000488128 LARP1Q6PKG0 1096 aaKnown RBP16.81■□□□□ 0.28
COL16A1-214ENST00000488128 FAM227BQ96M60 508 aa16.81■□□□□ 0.28
COL16A1-214ENST00000488128 TRERF1Q96PN7 1200 aa16.81■□□□□ 0.28
COL16A1-214ENST00000488128 PA2G4Q9UQ80 394 aaKnown RBP16.81■□□□□ 0.28
COL16A1-214ENST00000488128 CEP135Q66GS9 1140 aa16.81■□□□□ 0.28
COL16A1-214ENST00000488128 SSH3Q8TE77 659 aa16.81■□□□□ 0.28
COL16A1-214ENST00000488128 USP16Q9Y5T5 823 aa16.81■□□□□ 0.28
COL16A1-214ENST00000488128 DDX41Q9UJV9 622 aaKnown RBP16.8■□□□□ 0.28
COL16A1-214ENST00000488128 GNAT3A8MTJ3 354 aa16.79■□□□□ 0.28
COL16A1-214ENST00000488128 KMT5BQ4FZB7 885 aa16.79■□□□□ 0.28
COL16A1-214ENST00000488128 HDGFL1Q5TGJ6 251 aa16.79■□□□□ 0.28
COL16A1-214ENST00000488128 IL17REQ8NFR9 667 aa16.79■□□□□ 0.28
COL16A1-214ENST00000488128 DIP2AQ14689 1571 aa16.79■□□□□ 0.28
COL16A1-214ENST00000488128 KDRP35968 1356 aa16.79■□□□□ 0.28
COL16A1-214ENST00000488128 SLFN14P0C7P3 912 aa16.79■□□□□ 0.28
COL16A1-214ENST00000488128 GTF2E1P29083 439 aaPredicted RBP16.79■□□□□ 0.28
COL16A1-214ENST00000488128 TAF7Q15545 349 aaPredicted RBP16.79■□□□□ 0.28
COL16A1-214ENST00000488128 KIF18AQ8NI77 898 aa16.79■□□□□ 0.28
COL16A1-214ENST00000488128 KIF1BPQ96EK5 621 aa16.79■□□□□ 0.28
COL16A1-214ENST00000488128 ELF2Q15723 593 aa16.79■□□□□ 0.28
COL16A1-214ENST00000488128 VPS53Q5VIR6 699 aa16.79■□□□□ 0.28
COL16A1-214ENST00000488128 RBM8AQ9Y5S9 174 aaKnown RBP16.79■□□□□ 0.28
COL16A1-214ENST00000488128 IL17RAQ96F46 866 aa16.78■□□□□ 0.28
COL16A1-214ENST00000488128 JAK2O60674 1132 aa16.78■□□□□ 0.28
COL16A1-214ENST00000488128 PGBD1Q96JS3 809 aa16.78■□□□□ 0.28
COL16A1-214ENST00000488128 ZSWIM6Q9HCJ5 1215 aa16.78■□□□□ 0.28
COL16A1-214ENST00000488128 ZKSCAN1P17029 563 aaPredicted RBP16.77■□□□□ 0.28
COL16A1-214ENST00000488128 PLA2G4DQ86XP0 818 aa16.77■□□□□ 0.28
COL16A1-214ENST00000488128 LEO1Q8WVC0 666 aaPredicted RBP16.77■□□□□ 0.28
COL16A1-214ENST00000488128 FTOQ9C0B1 505 aaKnown RBP eCLIP16.77■□□□□ 0.28
COL16A1-214ENST00000488128 RGPD8O14715 1765 aaPredicted RBP16.77■□□□□ 0.28
COL16A1-214ENST00000488128 RGPD1P0DJD0 1748 aa16.77■□□□□ 0.28
COL16A1-214ENST00000488128 ARHGAP23Q9P227 1491 aa16.77■□□□□ 0.27
COL16A1-214ENST00000488128 PI4KAP2A4QPH2 592 aa16.76■□□□□ 0.27
COL16A1-214ENST00000488128 TRHP20396 242 aaPredicted RBP16.76■□□□□ 0.27
COL16A1-214ENST00000488128 CREB3L3Q68CJ9 461 aa16.76■□□□□ 0.27
COL16A1-214ENST00000488128 C11orf57Q6ZUT1 292 aaPredicted RBP16.76■□□□□ 0.27
COL16A1-214ENST00000488128 PI4KAP1Q8N8J0 262 aa16.76■□□□□ 0.27
COL16A1-214ENST00000488128 NALCNQ8IZF0 1738 aa16.76■□□□□ 0.27
COL16A1-214ENST00000488128 SKILP12757 684 aa16.76■□□□□ 0.27
COL16A1-214ENST00000488128 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.76■□□□□ 0.27
COL16A1-214ENST00000488128 SLIT1O75093 1534 aa16.76■□□□□ 0.27
COL16A1-214ENST00000488128 GOLGA6L19H0YKK7 550 aa16.75■□□□□ 0.27
COL16A1-214ENST00000488128 FBXO38Q6PIJ6 1188 aa16.75■□□□□ 0.27
COL16A1-214ENST00000488128 SH2B1Q9NRF2 756 aaPredicted RBP16.75■□□□□ 0.27
COL16A1-214ENST00000488128 TMEM51Q9NW97 253 aa16.75■□□□□ 0.27
COL16A1-214ENST00000488128 PTPN14Q15678 1187 aa16.75■□□□□ 0.27
COL16A1-214ENST00000488128 LRRC8AQ8IWT6 810 aa16.75■□□□□ 0.27
COL16A1-214ENST00000488128 CCDC8Q9H0W5 538 aaPredicted RBP16.75■□□□□ 0.27
COL16A1-214ENST00000488128 ZSCAN31Q96LW9 406 aaPredicted RBP16.75■□□□□ 0.27
COL16A1-214ENST00000488128 LRRC2Q9BYS8 371 aa16.75■□□□□ 0.27
COL16A1-214ENST00000488128 PAXBP1Q9Y5B6 917 aa16.75■□□□□ 0.27
COL16A1-214ENST00000488128 TUBGCP6Q96RT7 1819 aa16.74■□□□□ 0.27
COL16A1-214ENST00000488128 TERF2Q15554 542 aa16.74■□□□□ 0.27
COL16A1-214ENST00000488128 GLRX3O76003 335 aaKnown RBP16.74■□□□□ 0.27
COL16A1-214ENST00000488128 NMIQ13287 307 aaPredicted RBP16.74■□□□□ 0.27
COL16A1-214ENST00000488128 NECTIN1Q15223 517 aa16.74■□□□□ 0.27
COL16A1-214ENST00000488128 CLASRPQ8N2M8 674 aaKnown RBP16.74■□□□□ 0.27
COL16A1-214ENST00000488128 EDC3Q96F86 508 aaKnown RBP16.74■□□□□ 0.27
COL16A1-214ENST00000488128 CLSTN2Q9H4D0 955 aa16.74■□□□□ 0.27
COL16A1-214ENST00000488128 PIK3C2AO00443 1686 aa16.73■□□□□ 0.27
COL16A1-214ENST00000488128 AOX1Q06278 1338 aa16.73■□□□□ 0.27
COL16A1-214ENST00000488128 CHGBP05060 677 aa16.73■□□□□ 0.27
COL16A1-214ENST00000488128 IFIT2P09913 472 aaKnown RBP16.73■□□□□ 0.27
COL16A1-214ENST00000488128 AACSQ86V21 672 aa16.73■□□□□ 0.27
COL16A1-214ENST00000488128 LRRN4CLQ8ND94 238 aa16.73■□□□□ 0.27
COL16A1-214ENST00000488128 RUFY2Q8WXA3 655 aa16.73■□□□□ 0.27
COL16A1-214ENST00000488128 ZBTB9Q96C00 473 aa16.73■□□□□ 0.27
COL16A1-214ENST00000488128 PHF8Q9UPP1 1060 aa16.73■□□□□ 0.27
COL16A1-214ENST00000488128 NDUFB9Q9Y6M9 179 aa16.73■□□□□ 0.27
COL16A1-214ENST00000488128 CCDC171Q6TFL3 1326 aa16.73■□□□□ 0.27
COL16A1-214ENST00000488128 KRT222Q8N1A0 295 aa16.73■□□□□ 0.27
COL16A1-214ENST00000488128 GTF3C6Q969F1 213 aa16.73■□□□□ 0.27
COL16A1-214ENST00000488128 SIL1Q9H173 461 aa16.73■□□□□ 0.27
COL16A1-214ENST00000488128 BOLA2Q9H3K6 86 aa16.73■□□□□ 0.27
COL16A1-214ENST00000488128 CHPF2Q9P2E5 772 aa16.73■□□□□ 0.27
COL16A1-214ENST00000488128 RBM6P78332 1123 aaKnown RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms