RNA–Protein interactions for RNA: ENST00000487942.1

SCAP-212, Transcript of SREBF chaperone, humanhuman

TSL 3

Gene SCAP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-212ENST00000487942 FMNL2Q96PY5 1086 aa9.94□□□□□ -0.82
SCAP-212ENST00000487942 ZNF330Q9Y3S2 320 aaPredicted RBP9.94□□□□□ -0.82
SCAP-212ENST00000487942 USP16Q9Y5T5 823 aa9.94□□□□□ -0.82
SCAP-212ENST00000487942 DICER1Q9UPY3 1922 aaKnown RBP9.94□□□□□ -0.82
SCAP-212ENST00000487942 SLX4Q8IY92 1834 aa9.93□□□□□ -0.82
SCAP-212ENST00000487942 ARFGEF2Q9Y6D5 1785 aa9.93□□□□□ -0.82
SCAP-212ENST00000487942 CARMIL3Q8ND23 1372 aa9.93□□□□□ -0.82
SCAP-212ENST00000487942 STARD3NLO95772 234 aa9.93□□□□□ -0.82
SCAP-212ENST00000487942 ARSIQ5FYB1 569 aa9.93□□□□□ -0.82
SCAP-212ENST00000487942 BICDL1Q6ZP65 573 aa9.93□□□□□ -0.82
SCAP-212ENST00000487942 ZNF526Q8TF50 670 aaPredicted RBP9.93□□□□□ -0.82
SCAP-212ENST00000487942 RTF1Q92541 710 aaKnown RBP9.93□□□□□ -0.82
SCAP-212ENST00000487942 KHSRPQ92945 711 aaKnown RBP eCLIP9.93□□□□□ -0.82
SCAP-212ENST00000487942 PLEKHF1Q96S99 279 aa9.93□□□□□ -0.82
SCAP-212ENST00000487942 ZSWIM6Q9HCJ5 1215 aa9.93□□□□□ -0.82
SCAP-212ENST00000487942 MIS18AQ9NYP9 233 aa9.93□□□□□ -0.82
SCAP-212ENST00000487942 TBC1D2BQ9UPU7 963 aa9.93□□□□□ -0.82
SCAP-212ENST00000487942 FER1L6Q2WGJ9 1857 aa9.93□□□□□ -0.82
SCAP-212ENST00000487942 GIGYF1O75420 1035 aaPredicted RBP9.92□□□□□ -0.82
SCAP-212ENST00000487942 C1QTNF8P60827 252 aa9.92□□□□□ -0.82
SCAP-212ENST00000487942 TBC1D9BQ66K14 1250 aa9.92□□□□□ -0.82
SCAP-212ENST00000487942 ARHGAP27Q6ZUM4 889 aa9.92□□□□□ -0.82
SCAP-212ENST00000487942 THUMPD2Q9BTF0 503 aaKnown RBP9.92□□□□□ -0.82
SCAP-212ENST00000487942 KRTAP3-3Q9BYR6 98 aa9.92□□□□□ -0.82
SCAP-212ENST00000487942 KRTAP3-2Q9BYR7 98 aa9.92□□□□□ -0.82
SCAP-212ENST00000487942 TIAM2Q8IVF5 1701 aa9.91□□□□□ -0.82
SCAP-212ENST00000487942 SERPINB2P05120 415 aa9.91□□□□□ -0.82
SCAP-212ENST00000487942 CCDC24Q8N4L8 307 aa9.91□□□□□ -0.82
SCAP-212ENST00000487942 TMC2Q8TDI7 906 aa9.91□□□□□ -0.82
SCAP-212ENST00000487942 TEX13AQ9BXU3 409 aaPredicted RBP9.91□□□□□ -0.82
SCAP-212ENST00000487942 PIM2Q9P1W9 311 aa9.91□□□□□ -0.82
SCAP-212ENST00000487942 A0A087WZG4 1122 aa9.9□□□□□ -0.82
SCAP-212ENST00000487942 NBPF26B4DH59 902 aa9.9□□□□□ -0.82
SCAP-212ENST00000487942 HTATSF1O43719 755 aaKnown RBP9.9□□□□□ -0.82
SCAP-212ENST00000487942 CAMTA2O94983 1202 aa9.9□□□□□ -0.82
SCAP-212ENST00000487942 IL6STP40189 918 aaPredicted RBP9.9□□□□□ -0.82
SCAP-212ENST00000487942 TAF7Q15545 349 aaPredicted RBP9.9□□□□□ -0.82
SCAP-212ENST00000487942 NFE2L2Q16236 605 aa9.9□□□□□ -0.82
SCAP-212ENST00000487942 VARS2Q5ST30 1063 aaKnown RBP9.9□□□□□ -0.82
SCAP-212ENST00000487942 NBPF10Q6P3W6 841 aaKnown RBP9.9□□□□□ -0.82
SCAP-212ENST00000487942 SPNS2Q8IVW8 549 aa9.9□□□□□ -0.82
SCAP-212ENST00000487942 NBPF15Q8N660 670 aa9.9□□□□□ -0.82
SCAP-212ENST00000487942 SNRPA1P09661 255 aaKnown RBP9.89□□□□□ -0.83
SCAP-212ENST00000487942 RALBP1Q15311 655 aa9.89□□□□□ -0.83
SCAP-212ENST00000487942 DALRD3Q5D0E6 543 aaKnown RBP9.89□□□□□ -0.83
SCAP-212ENST00000487942 GPBP1L1Q9HC44 474 aaPredicted RBP9.89□□□□□ -0.83
SCAP-212ENST00000487942 TNRC6CQ9HCJ0 1690 aaKnown RBP9.88□□□□□ -0.83
SCAP-212ENST00000487942 SENP3-EIF4A1A0A087X0R7 540 aa9.88□□□□□ -0.83
SCAP-212ENST00000487942 PRR5LQ6MZQ0 368 aa9.88□□□□□ -0.83
SCAP-212ENST00000487942 DZIP3Q86Y13 1208 aaKnown RBP9.88□□□□□ -0.83
SCAP-212ENST00000487942 C2CD5Q86YS7 1000 aa9.88□□□□□ -0.83
SCAP-212ENST00000487942 ANKRD36CQ5JPF3 1778 aa9.88□□□□□ -0.83
SCAP-212ENST00000487942 NEFMP07197 916 aa9.87□□□□□ -0.83
SCAP-212ENST00000487942 PRELPP51888 382 aa9.87□□□□□ -0.83
SCAP-212ENST00000487942 RASSF7Q02833 373 aa9.87□□□□□ -0.83
SCAP-212ENST00000487942 C9orf131Q5VYM1 1079 aa9.87□□□□□ -0.83
SCAP-212ENST00000487942 CCDC146Q8IYE0 955 aa9.87□□□□□ -0.83
SCAP-212ENST00000487942 LAMB2P55268 1798 aa9.87□□□□□ -0.83
SCAP-212ENST00000487942 MYBBP1AQ9BQG0 1328 aaKnown RBP9.86□□□□□ -0.83
SCAP-212ENST00000487942 MAPK8IP3Q9UPT6 1336 aa9.86□□□□□ -0.83
SCAP-212ENST00000487942 TAF1P21675 1872 aa9.86□□□□□ -0.83
SCAP-212ENST00000487942 EIF4A1P60842 406 aaKnown RBP9.86□□□□□ -0.83
SCAP-212ENST00000487942 HLFQ16534 295 aa9.86□□□□□ -0.83
SCAP-212ENST00000487942 SETDB2Q96T68 719 aa9.86□□□□□ -0.83
SCAP-212ENST00000487942 RRP7AQ9Y3A4 280 aaKnown RBP9.86□□□□□ -0.83
SCAP-212ENST00000487942 H0YIN7 160 aa9.85□□□□□ -0.83
SCAP-212ENST00000487942 RIPK4P57078 832 aa9.85□□□□□ -0.83
SCAP-212ENST00000487942 MMRN1Q13201 1228 aa9.85□□□□□ -0.83
SCAP-212ENST00000487942 NGEFQ8N5V2 710 aa9.85□□□□□ -0.83
SCAP-212ENST00000487942 NMRK2Q9NPI5 230 aa9.85□□□□□ -0.83
SCAP-212ENST00000487942 TMPOP42166 694 aaKnown RBP9.84□□□□□ -0.83
SCAP-212ENST00000487942 NPM2Q86SE8 214 aaKnown RBP9.84□□□□□ -0.83
SCAP-212ENST00000487942 TTLL6Q8N841 843 aa9.84□□□□□ -0.83
SCAP-212ENST00000487942 CNBD1Q8NA66 436 aa9.84□□□□□ -0.83
SCAP-212ENST00000487942 ZNF622Q969S3 477 aaKnown RBP eCLIP9.84□□□□□ -0.83
SCAP-212ENST00000487942 BRIP1Q9BX63 1249 aa9.84□□□□□ -0.83
SCAP-212ENST00000487942 PNNQ9H307 717 aaKnown RBP9.84□□□□□ -0.83
SCAP-212ENST00000487942 RNF181Q9P0P0 153 aa9.84□□□□□ -0.83
SCAP-212ENST00000487942 FAM177BA6PVY3 158 aa9.83□□□□□ -0.84
SCAP-212ENST00000487942 MYL6BP14649 208 aa9.83□□□□□ -0.84
SCAP-212ENST00000487942 PDE6BP35913 854 aa9.83□□□□□ -0.84
SCAP-212ENST00000487942 NEUROD2Q15784 382 aa9.83□□□□□ -0.84
SCAP-212ENST00000487942 TTLL7Q6ZT98 887 aa9.83□□□□□ -0.84
SCAP-212ENST00000487942 PNISRQ8TF01 805 aaKnown RBP9.83□□□□□ -0.84
SCAP-212ENST00000487942 NIP7Q9Y221 180 aaKnown RBP eCLIP9.83□□□□□ -0.84
SCAP-212ENST00000487942 NFKBIEO00221 500 aa9.82□□□□□ -0.84
SCAP-212ENST00000487942 C21orf2O43822 256 aa9.82□□□□□ -0.84
SCAP-212ENST00000487942 NUDT7P0C024 238 aa9.82□□□□□ -0.84
SCAP-212ENST00000487942 KRT24Q2M2I5 525 aa9.82□□□□□ -0.84
SCAP-212ENST00000487942 CLEC4GQ6UXB4 293 aa9.82□□□□□ -0.84
SCAP-212ENST00000487942 NBPF5PQ86XG9 351 aaPredicted RBP9.82□□□□□ -0.84
SCAP-212ENST00000487942 PRKRIP1Q9H875 184 aaPredicted RBP9.82□□□□□ -0.84
SCAP-212ENST00000487942 TSPYL4Q9UJ04 414 aa9.82□□□□□ -0.84
SCAP-212ENST00000487942 ADAMTS8Q9UP79 889 aa9.82□□□□□ -0.84
SCAP-212ENST00000487942 PCDHGA4Q9Y5G9 962 aa9.82□□□□□ -0.84
SCAP-212ENST00000487942 WDR90Q96KV7 1748 aa9.82□□□□□ -0.84
SCAP-212ENST00000487942 ZNF316A6NFI3 1004 aaPredicted RBP9.81□□□□□ -0.84
SCAP-212ENST00000487942 NPHP1O15259 732 aa9.81□□□□□ -0.84
SCAP-212ENST00000487942 SLC34A2O95436 690 aa9.81□□□□□ -0.84
SCAP-212ENST00000487942 ANXA1P04083 346 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms