RNA–Protein interactions for RNA: ENST00000487894.5

HMG20B-212, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 1,242 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-212ENST00000487894 DICER1Q9UPY3 1922 aaKnown RBP21.98■■□□□ 1.11
HMG20B-212ENST00000487894 STYK1Q6J9G0 422 aa21.97■■□□□ 1.11
HMG20B-212ENST00000487894 ARHGAP27Q6ZUM4 889 aa21.97■■□□□ 1.11
HMG20B-212ENST00000487894 NLRP10Q86W26 655 aa21.97■■□□□ 1.11
HMG20B-212ENST00000487894 MASTLQ96GX5 879 aa21.97■■□□□ 1.11
HMG20B-212ENST00000487894 EXOSC9Q06265 439 aaKnown RBP21.96■■□□□ 1.11
HMG20B-212ENST00000487894 GOLGA2Q08379 1002 aa21.96■■□□□ 1.11
HMG20B-212ENST00000487894 MIER1Q8N108 512 aa21.96■■□□□ 1.11
HMG20B-212ENST00000487894 ZNF784Q8NCA9 323 aaPredicted RBP21.96■■□□□ 1.11
HMG20B-212ENST00000487894 MYH16Q9H6N6 1097 aa21.96■■□□□ 1.11
HMG20B-212ENST00000487894 UTP14AQ9BVJ6 771 aaKnown RBP21.95■■□□□ 1.1
HMG20B-212ENST00000487894 RNF123Q5XPI4 1314 aa21.95■■□□□ 1.1
HMG20B-212ENST00000487894 TCERG1O14776 1098 aaKnown RBP21.94■■□□□ 1.1
HMG20B-212ENST00000487894 NPR1P16066 1061 aa21.94■■□□□ 1.1
HMG20B-212ENST00000487894 CRY2Q49AN0 593 aa21.94■■□□□ 1.1
HMG20B-212ENST00000487894 CNKSR1Q969H4 720 aa21.94■■□□□ 1.1
HMG20B-212ENST00000487894 ISCA1Q9BUE6 129 aa21.94■■□□□ 1.1
HMG20B-212ENST00000487894 STK31Q9BXU1 1019 aa21.94■■□□□ 1.1
HMG20B-212ENST00000487894 TAF1P21675 1872 aa21.94■■□□□ 1.1
HMG20B-212ENST00000487894 VAMP4O75379 141 aa21.93■■□□□ 1.1
HMG20B-212ENST00000487894 PRPF40BQ6NWY9 871 aaKnown RBP21.93■■□□□ 1.1
HMG20B-212ENST00000487894 RIC3Q7Z5B4 369 aa21.92■■□□□ 1.1
HMG20B-212ENST00000487894 MYH3P11055 1940 aa21.91■■□□□ 1.1
HMG20B-212ENST00000487894 ATP5J2-PTCD1G3V325 749 aa21.91■■□□□ 1.1
HMG20B-212ENST00000487894 RASSF7Q02833 373 aa21.91■■□□□ 1.1
HMG20B-212ENST00000487894 C3orf67Q6ZVT6 689 aa21.91■■□□□ 1.1
HMG20B-212ENST00000487894 G2E3Q7L622 706 aa21.91■■□□□ 1.1
HMG20B-212ENST00000487894 C21orf2O43822 256 aa21.9■■□□□ 1.1
HMG20B-212ENST00000487894 SLC10A5Q5PT55 438 aa21.9■■□□□ 1.1
HMG20B-212ENST00000487894 ZNF428Q96B54 188 aa21.9■■□□□ 1.1
HMG20B-212ENST00000487894 ZNF219Q9P2Y4 722 aaPredicted RBP21.9■■□□□ 1.1
HMG20B-212ENST00000487894 TRMT112Q9UI30 125 aaKnown RBP21.9■■□□□ 1.1
HMG20B-212ENST00000487894 SH3TC1Q8TE82 1336 aa21.89■■□□□ 1.1
HMG20B-212ENST00000487894 NFKBIEO00221 500 aa21.89■■□□□ 1.09
HMG20B-212ENST00000487894 DDX58O95786 925 aaKnown RBP21.89■■□□□ 1.09
HMG20B-212ENST00000487894 SLC4A2P04920 1241 aa21.89■■□□□ 1.09
HMG20B-212ENST00000487894 SYNE4Q8N205 404 aa21.89■■□□□ 1.09
HMG20B-212ENST00000487894 TRIM28Q13263 835 aaKnown RBP21.88■■□□□ 1.09
HMG20B-212ENST00000487894 MYD88Q99836 296 aa21.88■■□□□ 1.09
HMG20B-212ENST00000487894 E9PSI1 815 aa21.87■■□□□ 1.09
HMG20B-212ENST00000487894 HOXA10P31260 410 aaPredicted RBP21.87■■□□□ 1.09
HMG20B-212ENST00000487894 PRELPP51888 382 aa21.87■■□□□ 1.09
HMG20B-212ENST00000487894 C9orf131Q5VYM1 1079 aa21.87■■□□□ 1.09
HMG20B-212ENST00000487894 C7orf43Q8WVR3 580 aa21.87■■□□□ 1.09
HMG20B-212ENST00000487894 RPGRQ92834 1020 aaKnown RBP21.87■■□□□ 1.09
HMG20B-212ENST00000487894 METTL22Q9BUU2 404 aaPredicted RBP21.87■■□□□ 1.09
HMG20B-212ENST00000487894 MAP3K2Q9Y2U5 619 aa21.87■■□□□ 1.09
HMG20B-212ENST00000487894 SNED1Q8TER0 1413 aa21.87■■□□□ 1.09
HMG20B-212ENST00000487894 PI4KAP2A4QPH2 592 aa21.86■■□□□ 1.09
HMG20B-212ENST00000487894 HCLS1P14317 486 aaPredicted RBP21.86■■□□□ 1.09
HMG20B-212ENST00000487894 FLIIQ13045 1269 aa21.86■■□□□ 1.09
HMG20B-212ENST00000487894 KSR2Q6VAB6 950 aa21.86■■□□□ 1.09
HMG20B-212ENST00000487894 PI4KAP1Q8N8J0 262 aa21.86■■□□□ 1.09
HMG20B-212ENST00000487894 NLRP3Q96P20 1036 aa21.86■■□□□ 1.09
HMG20B-212ENST00000487894 LRRC37AA6NMS7 1700 aa21.86■■□□□ 1.09
HMG20B-212ENST00000487894 ALDH1B1P30837 517 aa21.85■■□□□ 1.09
HMG20B-212ENST00000487894 SLFN5Q08AF3 891 aa21.85■■□□□ 1.09
HMG20B-212ENST00000487894 RNF181Q9P0P0 153 aa21.85■■□□□ 1.09
HMG20B-212ENST00000487894 LTBP3Q9NS15 1303 aa21.84■■□□□ 1.09
HMG20B-212ENST00000487894 SOGA3Q5TF21 947 aa21.84■■□□□ 1.09
HMG20B-212ENST00000487894 FAM89AQ96GI7 184 aa21.84■■□□□ 1.09
HMG20B-212ENST00000487894 COL4A1P02462 1669 aa21.84■■□□□ 1.09
HMG20B-212ENST00000487894 OLFM4Q6UX06 510 aa21.83■■□□□ 1.09
HMG20B-212ENST00000487894 CCDC191Q8NCU4 936 aa21.83■■□□□ 1.09
HMG20B-212ENST00000487894 CDCA7LQ96GN5 454 aa21.83■■□□□ 1.09
HMG20B-212ENST00000487894 RBM17Q96I25 401 aaKnown RBP21.83■■□□□ 1.09
HMG20B-212ENST00000487894 CRAMP1Q96RY5 1269 aa21.83■■□□□ 1.09
HMG20B-212ENST00000487894 IGKV5-2P06315 115 aa21.82■■□□□ 1.08
HMG20B-212ENST00000487894 LMNB1P20700 586 aa21.82■■□□□ 1.08
HMG20B-212ENST00000487894 CCDC93Q567U6 631 aa21.82■■□□□ 1.08
HMG20B-212ENST00000487894 ABCC4O15439 1325 aa21.81■■□□□ 1.08
HMG20B-212ENST00000487894 SPEF2Q9C093 1822 aa21.81■■□□□ 1.08
HMG20B-212ENST00000487894 FKBP5Q13451 457 aaPredicted RBP21.81■■□□□ 1.08
HMG20B-212ENST00000487894 RTL5Q5HYW3 569 aaPredicted RBP21.81■■□□□ 1.08
HMG20B-212ENST00000487894 ZBTB38Q8NAP3 1195 aaPredicted RBP21.81■■□□□ 1.08
HMG20B-212ENST00000487894 TAOK3Q9H2K8 898 aa21.81■■□□□ 1.08
HMG20B-212ENST00000487894 CWC25Q9NXE8 425 aaPredicted RBP21.81■■□□□ 1.08
HMG20B-212ENST00000487894 SLC51AQ86UW1 340 aa21.8■■□□□ 1.08
HMG20B-212ENST00000487894 TRMT2AQ8IZ69 625 aaKnown RBP21.8■■□□□ 1.08
HMG20B-212ENST00000487894 ZNF526Q8TF50 670 aaPredicted RBP21.8■■□□□ 1.08
HMG20B-212ENST00000487894 IRS4O14654 1257 aaPredicted RBP21.79■■□□□ 1.08
HMG20B-212ENST00000487894 PPEF1O14829 653 aaPredicted RBP21.79■■□□□ 1.08
HMG20B-212ENST00000487894 PCCAP05165 728 aaPredicted RBP21.79■■□□□ 1.08
HMG20B-212ENST00000487894 NEXNQ0ZGT2 675 aa21.79■■□□□ 1.08
HMG20B-212ENST00000487894 ZC3H4Q9UPT8 1303 aaKnown RBP21.79■■□□□ 1.08
HMG20B-212ENST00000487894 CWF19L2Q2TBE0 894 aaKnown RBP21.78■■□□□ 1.08
HMG20B-212ENST00000487894 DNAAF4Q8WXU2 420 aa21.78■■□□□ 1.08
HMG20B-212ENST00000487894 NEURL1BA8MQ27 555 aa21.77■■□□□ 1.08
HMG20B-212ENST00000487894 FKBP4Q02790 459 aaKnown RBP eCLIP21.77■■□□□ 1.08
HMG20B-212ENST00000487894 SF3B3Q15393 1217 aaKnown RBP21.77■■□□□ 1.08
HMG20B-212ENST00000487894 GPBP1L1Q9HC44 474 aaPredicted RBP21.77■■□□□ 1.08
HMG20B-212ENST00000487894 LTBP1Q14766 1721 aa21.77■■□□□ 1.08
HMG20B-212ENST00000487894 CDHR2Q9BYE9 1310 aa21.77■■□□□ 1.07
HMG20B-212ENST00000487894 RTKN2Q8IZC4 609 aa21.76■■□□□ 1.07
HMG20B-212ENST00000487894 JARID2Q92833 1246 aaPredicted RBP21.76■■□□□ 1.07
HMG20B-212ENST00000487894 GRAPQ13588 217 aa21.75■■□□□ 1.07
HMG20B-212ENST00000487894 CC2D2BQ6DHV5 1058 aa21.75■■□□□ 1.07
HMG20B-212ENST00000487894 DDX46Q7L014 1031 aaKnown RBP21.75■■□□□ 1.07
HMG20B-212ENST00000487894 GRAPLQ8TC17 118 aaPredicted RBP21.75■■□□□ 1.07
HMG20B-212ENST00000487894 DUOX1Q9NRD9 1551 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms