RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 ERICH6Q7L0X2 663 aa7.74□□□□□ -1.17
HMGB1P36-201ENST00000487709 USP21Q9UK80 565 aa7.74□□□□□ -1.17
HMGB1P36-201ENST00000487709 ZBTB7BO15156 539 aaPredicted RBP7.73□□□□□ -1.17
HMGB1P36-201ENST00000487709 PPP1R12BO60237 982 aaPredicted RBP7.73□□□□□ -1.17
HMGB1P36-201ENST00000487709 ATP1A2P50993 1020 aa7.73□□□□□ -1.17
HMGB1P36-201ENST00000487709 HIRAP54198 1017 aaPredicted RBP7.73□□□□□ -1.17
HMGB1P36-201ENST00000487709 LENG1Q96BZ8 264 aaPredicted RBP7.73□□□□□ -1.17
HMGB1P36-201ENST00000487709 USP17L3A6NCW0 530 aa7.72□□□□□ -1.17
HMGB1P36-201ENST00000487709 USP17L4A6NCW7 530 aa7.72□□□□□ -1.17
HMGB1P36-201ENST00000487709 NRG1Q02297 640 aaPredicted RBP7.72□□□□□ -1.17
HMGB1P36-201ENST00000487709 PSAPL1Q6NUJ1 521 aa7.72□□□□□ -1.17
HMGB1P36-201ENST00000487709 USP17L2Q6R6M4 530 aa7.72□□□□□ -1.17
HMGB1P36-201ENST00000487709 USP17L1Q7RTZ2 530 aa7.72□□□□□ -1.17
HMGB1P36-201ENST00000487709 BTLAQ7Z6A9 289 aa7.72□□□□□ -1.17
HMGB1P36-201ENST00000487709 WWC1Q8IX03 1113 aa7.72□□□□□ -1.17
HMGB1P36-201ENST00000487709 DMRTC2Q8IXT2 367 aaPredicted RBP7.72□□□□□ -1.17
HMGB1P36-201ENST00000487709 TSEN2Q8NCE0 465 aaKnown RBP7.72□□□□□ -1.17
HMGB1P36-201ENST00000487709 DNAJB12Q9NXW2 375 aaKnown RBP7.72□□□□□ -1.17
HMGB1P36-201ENST00000487709 NAGPAQ9UK23 515 aa7.72□□□□□ -1.17
HMGB1P36-201ENST00000487709 AFF1P51825 1210 aaKnown RBP7.71□□□□□ -1.18
HMGB1P36-201ENST00000487709 POM121Q96HA1 1249 aa7.71□□□□□ -1.18
HMGB1P36-201ENST00000487709 NGLY1Q96IV0 654 aa7.71□□□□□ -1.18
HMGB1P36-201ENST00000487709 HYAL3O43820 417 aaPredicted RBP7.7□□□□□ -1.18
HMGB1P36-201ENST00000487709 LCE3BQ5TA77 95 aa7.7□□□□□ -1.18
HMGB1P36-201ENST00000487709 ALDH16A1Q8IZ83 802 aa7.7□□□□□ -1.18
HMGB1P36-201ENST00000487709 FMR1NBQ8N0W7 255 aaPredicted RBP7.7□□□□□ -1.18
HMGB1P36-201ENST00000487709 OGFOD1Q8N543 542 aa7.7□□□□□ -1.18
HMGB1P36-201ENST00000487709 ZNF594Q96JF6 807 aaPredicted RBP7.7□□□□□ -1.18
HMGB1P36-201ENST00000487709 PNMA5Q96PV4 448 aa7.7□□□□□ -1.18
HMGB1P36-201ENST00000487709 KRTAP4-12Q9BQ66 201 aa7.7□□□□□ -1.18
HMGB1P36-201ENST00000487709 POM121CA8CG34 1229 aa7.69□□□□□ -1.18
HMGB1P36-201ENST00000487709 RGS9O75916 674 aaPredicted RBP7.69□□□□□ -1.18
HMGB1P36-201ENST00000487709 NFKB1P19838 968 aa7.69□□□□□ -1.18
HMGB1P36-201ENST00000487709 POTEAQ6S8J7 498 aa7.69□□□□□ -1.18
HMGB1P36-201ENST00000487709 PLEKHM2Q8IWE5 1019 aa7.69□□□□□ -1.18
HMGB1P36-201ENST00000487709 CHMP7Q8WUX9 453 aaPredicted RBP7.69□□□□□ -1.18
HMGB1P36-201ENST00000487709 C21orf2O43822 256 aa7.68□□□□□ -1.18
HMGB1P36-201ENST00000487709 ADAMTS19Q8TE59 1207 aa7.68□□□□□ -1.18
HMGB1P36-201ENST00000487709 RBM19Q9Y4C8 960 aaKnown RBP7.68□□□□□ -1.18
HMGB1P36-201ENST00000487709 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.68□□□□□ -1.18
HMGB1P36-201ENST00000487709 PALM3A6NDB9 673 aaPredicted RBP7.67□□□□□ -1.18
HMGB1P36-201ENST00000487709 M0R2N6 131 aa7.67□□□□□ -1.18
HMGB1P36-201ENST00000487709 CPB1P15086 417 aa7.67□□□□□ -1.18
HMGB1P36-201ENST00000487709 FAM35AQ86V20 835 aa7.67□□□□□ -1.18
HMGB1P36-201ENST00000487709 LARGE2Q8N3Y3 721 aa7.67□□□□□ -1.18
HMGB1P36-201ENST00000487709 SCG3Q8WXD2 468 aaKnown RBP7.67□□□□□ -1.18
HMGB1P36-201ENST00000487709 UCN2Q96RP3 112 aa7.67□□□□□ -1.18
HMGB1P36-201ENST00000487709 SSBP4Q9BWG4 385 aaPredicted RBP7.67□□□□□ -1.18
HMGB1P36-201ENST00000487709 GSX2Q9BZM3 304 aa7.67□□□□□ -1.18
HMGB1P36-201ENST00000487709 MKRN1Q9UHC7 482 aaKnown RBP7.67□□□□□ -1.18
HMGB1P36-201ENST00000487709 GTF3C3Q9Y5Q9 886 aa7.67□□□□□ -1.18
HMGB1P36-201ENST00000487709 HIF1AQ16665 826 aa7.66□□□□□ -1.18
HMGB1P36-201ENST00000487709 ATP9BO43861 1147 aa7.65□□□□□ -1.18
HMGB1P36-201ENST00000487709 CCINQ13939 588 aa7.65□□□□□ -1.18
HMGB1P36-201ENST00000487709 MSL1Q68DK7 614 aa7.65□□□□□ -1.18
HMGB1P36-201ENST00000487709 ATAD2Q6PL18 1390 aa7.65□□□□□ -1.18
HMGB1P36-201ENST00000487709 SIX5Q8N196 739 aa7.65□□□□□ -1.18
HMGB1P36-201ENST00000487709 C2orf49Q9BVC5 232 aaPredicted RBP7.65□□□□□ -1.18
HMGB1P36-201ENST00000487709 RAD21O60216 631 aa7.64□□□□□ -1.19
HMGB1P36-201ENST00000487709 IREB2P48200 963 aaKnown RBP7.64□□□□□ -1.19
HMGB1P36-201ENST00000487709 KRT25Q7Z3Z0 450 aa7.64□□□□□ -1.19
HMGB1P36-201ENST00000487709 WFDC12Q8WWY7 111 aa7.64□□□□□ -1.19
HMGB1P36-201ENST00000487709 EFCC1Q9HA90 598 aa7.64□□□□□ -1.19
HMGB1P36-201ENST00000487709 LGR5O75473 907 aa7.63□□□□□ -1.19
HMGB1P36-201ENST00000487709 NOS3P29474 1203 aa7.63□□□□□ -1.19
HMGB1P36-201ENST00000487709 MLLT1Q03111 559 aaPredicted RBP7.63□□□□□ -1.19
HMGB1P36-201ENST00000487709 PLAURQ03405 335 aa7.63□□□□□ -1.19
HMGB1P36-201ENST00000487709 HDGFL1Q5TGJ6 251 aa7.63□□□□□ -1.19
HMGB1P36-201ENST00000487709 TGFBR3LH3BV60 316 aa7.62□□□□□ -1.19
HMGB1P36-201ENST00000487709 PERM1Q5SV97 790 aa7.62□□□□□ -1.19
HMGB1P36-201ENST00000487709 WFDC8Q8IUA0 241 aa7.62□□□□□ -1.19
HMGB1P36-201ENST00000487709 GAS2L2Q8NHY3 880 aa7.62□□□□□ -1.19
HMGB1P36-201ENST00000487709 LPIN3Q9BQK8 851 aa7.62□□□□□ -1.19
HMGB1P36-201ENST00000487709 DKK1O94907 266 aa7.61□□□□□ -1.19
HMGB1P36-201ENST00000487709 EPB42P16452 691 aa7.61□□□□□ -1.19
HMGB1P36-201ENST00000487709 RASA1P20936 1047 aa7.61□□□□□ -1.19
HMGB1P36-201ENST00000487709 GRIK5Q16478 980 aa7.61□□□□□ -1.19
HMGB1P36-201ENST00000487709 RTN1Q16799 776 aa7.61□□□□□ -1.19
HMGB1P36-201ENST00000487709 IER5Q5VY09 327 aa7.61□□□□□ -1.19
HMGB1P36-201ENST00000487709 ELMSAN1Q6PJG2 1045 aa7.61□□□□□ -1.19
HMGB1P36-201ENST00000487709 ILDR2Q71H61 639 aa7.61□□□□□ -1.19
HMGB1P36-201ENST00000487709 FBXO11Q86XK2 927 aa7.61□□□□□ -1.19
HMGB1P36-201ENST00000487709 STAG2Q8N3U4 1231 aa7.61□□□□□ -1.19
HMGB1P36-201ENST00000487709 DTWD1Q8N5C7 304 aa7.61□□□□□ -1.19
HMGB1P36-201ENST00000487709 MEGF10Q96KG7 1140 aa7.61□□□□□ -1.19
HMGB1P36-201ENST00000487709 BCS1LQ9Y276 419 aa7.61□□□□□ -1.19
HMGB1P36-201ENST00000487709 GRNP28799 593 aaKnown RBP7.6□□□□□ -1.19
HMGB1P36-201ENST00000487709 SEC13P55735 322 aa7.6□□□□□ -1.19
HMGB1P36-201ENST00000487709 RNF112Q9ULX5 631 aa7.6□□□□□ -1.19
HMGB1P36-201ENST00000487709 IDH3AP50213 366 aa7.59□□□□□ -1.19
HMGB1P36-201ENST00000487709 PCSK7Q16549 785 aa7.59□□□□□ -1.19
HMGB1P36-201ENST00000487709 DHX32Q7L7V1 743 aaKnown RBP7.59□□□□□ -1.19
HMGB1P36-201ENST00000487709 HINFPQ9BQA5 517 aa7.59□□□□□ -1.19
HMGB1P36-201ENST00000487709 KLK14Q9P0G3 267 aa7.59□□□□□ -1.19
HMGB1P36-201ENST00000487709 ZFATQ9P243 1243 aa7.59□□□□□ -1.19
HMGB1P36-201ENST00000487709 DMGDHQ9UI17 866 aaKnown RBP7.59□□□□□ -1.19
HMGB1P36-201ENST00000487709 ZBTB42B2RXF5 422 aa7.58□□□□□ -1.2
HMGB1P36-201ENST00000487709 UBTFP17480 764 aaKnown RBP7.58□□□□□ -1.2
HMGB1P36-201ENST00000487709 TARSP26639 723 aaKnown RBP7.58□□□□□ -1.2
HMGB1P36-201ENST00000487709 PRR23CQ6ZRP0 262 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms