RNA–Protein interactions for RNA: ENST00000487633.1

COL4A3-206, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-206ENST00000487633 RBBP6Q7Z6E9 1792 aaKnown RBP8.17□□□□□ -1.1
COL4A3-206ENST00000487633 KIAA0100Q14667 2235 aaKnown RBP8.17□□□□□ -1.1
COL4A3-206ENST00000487633 TCERG1O14776 1098 aaKnown RBP8.16□□□□□ -1.1
COL4A3-206ENST00000487633 KCNQ3O43525 872 aa8.16□□□□□ -1.1
COL4A3-206ENST00000487633 GMPSP49915 693 aaPredicted RBP8.16□□□□□ -1.1
COL4A3-206ENST00000487633 EIF6P56537 245 aaKnown RBP8.16□□□□□ -1.1
COL4A3-206ENST00000487633 C1orf141Q5JVX7 400 aa8.16□□□□□ -1.1
COL4A3-206ENST00000487633 RGMBQ6NW40 437 aa8.16□□□□□ -1.1
COL4A3-206ENST00000487633 ZNF296Q8WUU4 475 aaPredicted RBP8.16□□□□□ -1.1
COL4A3-206ENST00000487633 ZNF496Q96IT1 587 aaPredicted RBP8.16□□□□□ -1.1
COL4A3-206ENST00000487633 ABCC12Q96J65 1359 aa8.16□□□□□ -1.1
COL4A3-206ENST00000487633 ADM5C9JUS6 153 aa8.15□□□□□ -1.1
COL4A3-206ENST00000487633 TBC1D8O95759 1140 aa8.15□□□□□ -1.1
COL4A3-206ENST00000487633 ST5P78524 1137 aa8.15□□□□□ -1.1
COL4A3-206ENST00000487633 CXCL9Q07325 125 aa8.15□□□□□ -1.1
COL4A3-206ENST00000487633 AOC3Q16853 763 aa8.15□□□□□ -1.1
COL4A3-206ENST00000487633 AMOTQ4VCS5 1084 aa8.15□□□□□ -1.1
COL4A3-206ENST00000487633 SULT6B1Q6IMI4 303 aa8.15□□□□□ -1.1
COL4A3-206ENST00000487633 C3orf67Q6ZVT6 689 aa8.15□□□□□ -1.1
COL4A3-206ENST00000487633 RTKN2Q8IZC4 609 aa8.15□□□□□ -1.1
COL4A3-206ENST00000487633 JDP2Q8WYK2 163 aa8.15□□□□□ -1.1
COL4A3-206ENST00000487633 PSMD1Q99460 953 aa8.15□□□□□ -1.1
COL4A3-206ENST00000487633 ADARB2Q9NS39 739 aaKnown RBP8.15□□□□□ -1.1
COL4A3-206ENST00000487633 SAGE1Q9NXZ1 904 aa8.15□□□□□ -1.1
COL4A3-206ENST00000487633 NPC1L1Q9UHC9 1359 aa8.14□□□□□ -1.11
COL4A3-206ENST00000487633 ASTN2O75129 1339 aaPredicted RBP8.14□□□□□ -1.11
COL4A3-206ENST00000487633 CAP1Q01518 475 aa8.14□□□□□ -1.11
COL4A3-206ENST00000487633 NBPF5PQ86XG9 351 aaPredicted RBP8.14□□□□□ -1.11
COL4A3-206ENST00000487633 LARGE2Q8N3Y3 721 aa8.14□□□□□ -1.11
COL4A3-206ENST00000487633 SLC17A8Q8NDX2 589 aa8.14□□□□□ -1.11
COL4A3-206ENST00000487633 CEP290O15078 2479 aa8.14□□□□□ -1.11
COL4A3-206ENST00000487633 LAMA3Q16787 3333 aa8.13□□□□□ -1.11
COL4A3-206ENST00000487633 NUP98P52948 1817 aa8.13□□□□□ -1.11
COL4A3-206ENST00000487633 KDM3BQ7LBC6 1761 aa8.13□□□□□ -1.11
COL4A3-206ENST00000487633 NPHP1O15259 732 aa8.13□□□□□ -1.11
COL4A3-206ENST00000487633 SLC10A3P09131 477 aa8.13□□□□□ -1.11
COL4A3-206ENST00000487633 EN2P19622 333 aaPredicted RBP8.13□□□□□ -1.11
COL4A3-206ENST00000487633 HLFQ16534 295 aa8.13□□□□□ -1.11
COL4A3-206ENST00000487633 MOB2Q70IA6 237 aa8.13□□□□□ -1.11
COL4A3-206ENST00000487633 SAMD7Q7Z3H4 446 aa8.13□□□□□ -1.11
COL4A3-206ENST00000487633 DZIP3Q86Y13 1208 aaKnown RBP8.13□□□□□ -1.11
COL4A3-206ENST00000487633 NUTM1Q86Y26 1132 aa8.13□□□□□ -1.11
COL4A3-206ENST00000487633 VSIG10Q8N0Z9 540 aa8.13□□□□□ -1.11
COL4A3-206ENST00000487633 OTUD5Q96G74 571 aa8.13□□□□□ -1.11
COL4A3-206ENST00000487633 USP16Q9Y5T5 823 aa8.13□□□□□ -1.11
COL4A3-206ENST00000487633 CUL9Q8IWT3 2517 aa8.13□□□□□ -1.11
COL4A3-206ENST00000487633 UNC80Q8N2C7 3258 aa8.13□□□□□ -1.11
COL4A3-206ENST00000487633 HEG1Q9ULI3 1381 aa8.12□□□□□ -1.11
COL4A3-206ENST00000487633 COL4A1P02462 1669 aa8.12□□□□□ -1.11
COL4A3-206ENST00000487633 A0A087WZG4 1122 aa8.12□□□□□ -1.11
COL4A3-206ENST00000487633 YDJCA8MPS7 323 aa8.12□□□□□ -1.11
COL4A3-206ENST00000487633 RAD17O75943 681 aa8.12□□□□□ -1.11
COL4A3-206ENST00000487633 IL6STP40189 918 aaPredicted RBP8.12□□□□□ -1.11
COL4A3-206ENST00000487633 ZNF157P51786 506 aaPredicted RBP8.12□□□□□ -1.11
COL4A3-206ENST00000487633 MTHFSDQ2M296 383 aaKnown RBP8.12□□□□□ -1.11
COL4A3-206ENST00000487633 AKAP4Q5JQC9 854 aa8.12□□□□□ -1.11
COL4A3-206ENST00000487633 CDC37L1Q7L3B6 337 aa8.12□□□□□ -1.11
COL4A3-206ENST00000487633 RASAL3Q86YV0 1011 aa8.12□□□□□ -1.11
COL4A3-206ENST00000487633 GBA2Q9HCG7 927 aaPredicted RBP8.12□□□□□ -1.11
COL4A3-206ENST00000487633 SCAF8Q9UPN6 1271 aaKnown RBP8.12□□□□□ -1.11
COL4A3-206ENST00000487633 ZBTB12Q9Y330 459 aaPredicted RBP8.12□□□□□ -1.11
COL4A3-206ENST00000487633 LAMB2P55268 1798 aa8.12□□□□□ -1.11
COL4A3-206ENST00000487633 SCN9AQ15858 1988 aa8.11□□□□□ -1.11
COL4A3-206ENST00000487633 DUOX1Q9NRD9 1551 aa8.11□□□□□ -1.11
COL4A3-206ENST00000487633 HMOX1P09601 288 aa8.11□□□□□ -1.11
COL4A3-206ENST00000487633 IL13P35225 146 aa8.11□□□□□ -1.11
COL4A3-206ENST00000487633 CRY2Q49AN0 593 aa8.11□□□□□ -1.11
COL4A3-206ENST00000487633 VCANP13611 3396 aa8.11□□□□□ -1.11
COL4A3-206ENST00000487633 NBPF26B4DH59 902 aa8.1□□□□□ -1.11
COL4A3-206ENST00000487633 PPIP5K2O43314 1243 aa8.1□□□□□ -1.11
COL4A3-206ENST00000487633 NBPF10Q6P3W6 841 aaKnown RBP8.1□□□□□ -1.11
COL4A3-206ENST00000487633 FBXO46Q6PJ61 603 aaPredicted RBP8.1□□□□□ -1.11
COL4A3-206ENST00000487633 NIM1KQ8IY84 436 aa8.1□□□□□ -1.11
COL4A3-206ENST00000487633 KCNQ5Q9NR82 932 aa8.1□□□□□ -1.11
COL4A3-206ENST00000487633 CNOT7Q9UIV1 285 aaKnown RBP8.1□□□□□ -1.11
COL4A3-206ENST00000487633 NIP7Q9Y221 180 aaKnown RBP eCLIP8.1□□□□□ -1.11
COL4A3-206ENST00000487633 SPTBN5Q9NRC6 3674 aaKnown RBP8.09□□□□□ -1.11
COL4A3-206ENST00000487633 ZSWIM8A7E2V4 1837 aa8.09□□□□□ -1.11
COL4A3-206ENST00000487633 GPR25O00155 361 aa8.09□□□□□ -1.11
COL4A3-206ENST00000487633 STARD3NLO95772 234 aa8.09□□□□□ -1.11
COL4A3-206ENST00000487633 ALDH1B1P30837 517 aa8.09□□□□□ -1.11
COL4A3-206ENST00000487633 TBC1D10BQ4KMP7 808 aaPredicted RBP8.09□□□□□ -1.11
COL4A3-206ENST00000487633 MICALL2Q8IY33 904 aa8.09□□□□□ -1.11
COL4A3-206ENST00000487633 IL17REQ8NFR9 667 aa8.09□□□□□ -1.11
COL4A3-206ENST00000487633 HDAC9Q9UKV0 1011 aa8.09□□□□□ -1.11
COL4A3-206ENST00000487633 H0YGN5 161 aa8.08□□□□□ -1.12
COL4A3-206ENST00000487633 SOX1O00570 391 aaPredicted RBP8.08□□□□□ -1.12
COL4A3-206ENST00000487633 MKRN3Q13064 507 aaKnown RBP8.08□□□□□ -1.12
COL4A3-206ENST00000487633 RBM26Q5T8P6 1007 aaKnown RBP8.08□□□□□ -1.12
COL4A3-206ENST00000487633 ZNF790Q6PG37 636 aa8.08□□□□□ -1.12
COL4A3-206ENST00000487633 KRT26Q7Z3Y9 468 aa8.08□□□□□ -1.12
COL4A3-206ENST00000487633 ZC3H15Q8WU90 426 aaKnown RBP8.08□□□□□ -1.12
COL4A3-206ENST00000487633 CCDC102AQ96A19 550 aa8.08□□□□□ -1.12
COL4A3-206ENST00000487633 RBM27Q9P2N5 1060 aaKnown RBP8.08□□□□□ -1.12
COL4A3-206ENST00000487633 ZNRF3Q9ULT6 936 aa8.08□□□□□ -1.12
COL4A3-206ENST00000487633 RIC1Q4ADV7 1423 aa8.08□□□□□ -1.12
COL4A3-206ENST00000487633 UBN2Q6ZU65 1347 aa8.07□□□□□ -1.12
COL4A3-206ENST00000487633 PPEF1O14829 653 aaPredicted RBP8.07□□□□□ -1.12
COL4A3-206ENST00000487633 PKN2Q16513 984 aaKnown RBP8.07□□□□□ -1.12
COL4A3-206ENST00000487633 PRAMEF18Q5VWM3 479 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms