RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 SLC10A5Q5PT55 438 aa14.83□□□□□ -0.04
SPEN-205ENST00000487496 ANKRD13DQ6ZTN6 518 aa14.83□□□□□ -0.04
SPEN-205ENST00000487496 PLBD2Q8NHP8 589 aa14.83□□□□□ -0.04
SPEN-205ENST00000487496 KDM2BQ8NHM5 1336 aa14.83□□□□□ -0.04
SPEN-205ENST00000487496 LTBP3Q9NS15 1303 aa14.83□□□□□ -0.04
SPEN-205ENST00000487496 TNRC6CQ9HCJ0 1690 aaKnown RBP14.82□□□□□ -0.04
SPEN-205ENST00000487496 HOXA10P31260 410 aaPredicted RBP14.82□□□□□ -0.04
SPEN-205ENST00000487496 CCDC93Q567U6 631 aa14.82□□□□□ -0.04
SPEN-205ENST00000487496 C3orf67Q6ZVT6 689 aa14.82□□□□□ -0.04
SPEN-205ENST00000487496 TSR2Q969E8 191 aaKnown RBP14.82□□□□□ -0.04
SPEN-205ENST00000487496 FER1L6Q2WGJ9 1857 aa14.81□□□□□ -0.04
SPEN-205ENST00000487496 OLFM4Q6UX06 510 aa14.81□□□□□ -0.04
SPEN-205ENST00000487496 TSPYL6Q8N831 410 aa14.81□□□□□ -0.04
SPEN-205ENST00000487496 RPGRQ92834 1020 aaKnown RBP14.81□□□□□ -0.04
SPEN-205ENST00000487496 NLRP3Q96P20 1036 aa14.81□□□□□ -0.04
SPEN-205ENST00000487496 IL16Q14005 1332 aa14.81□□□□□ -0.04
SPEN-205ENST00000487496 RNF123Q5XPI4 1314 aa14.81□□□□□ -0.04
SPEN-205ENST00000487496 ARFGEF2Q9Y6D5 1785 aa14.8□□□□□ -0.04
SPEN-205ENST00000487496 FAM9BQ8IZU0 186 aa14.8□□□□□ -0.04
SPEN-205ENST00000487496 CRAMP1Q96RY5 1269 aa14.8□□□□□ -0.04
SPEN-205ENST00000487496 ISCA1Q9BUE6 129 aa14.8□□□□□ -0.04
SPEN-205ENST00000487496 CHMP4AQ9BY43 222 aa14.8□□□□□ -0.04
SPEN-205ENST00000487496 PHAXQ9H814 394 aaKnown RBP14.8□□□□□ -0.04
SPEN-205ENST00000487496 RRAGCQ9HB90 399 aa14.8□□□□□ -0.04
SPEN-205ENST00000487496 TRMT112Q9UI30 125 aaKnown RBP14.8□□□□□ -0.04
SPEN-205ENST00000487496 SALL2Q9Y467 1007 aaPredicted RBP14.8□□□□□ -0.04
SPEN-205ENST00000487496 GLTPD2A6NH11 291 aa14.79□□□□□ -0.04
SPEN-205ENST00000487496 TOMM70O94826 608 aa14.79□□□□□ -0.04
SPEN-205ENST00000487496 CACNA1SQ13698 1873 aa14.79□□□□□ -0.04
SPEN-205ENST00000487496 CCDC30Q5VVM6 783 aa14.79□□□□□ -0.04
SPEN-205ENST00000487496 RTKN2Q8IZC4 609 aa14.79□□□□□ -0.04
SPEN-205ENST00000487496 SYNE4Q8N205 404 aa14.79□□□□□ -0.04
SPEN-205ENST00000487496 RBM17Q96I25 401 aaKnown RBP14.79□□□□□ -0.04
SPEN-205ENST00000487496 SH3TC1Q8TE82 1336 aa14.78□□□□□ -0.04
SPEN-205ENST00000487496 ATP5J2-PTCD1G3V325 749 aa14.78□□□□□ -0.04
SPEN-205ENST00000487496 HCLS1P14317 486 aaPredicted RBP14.78□□□□□ -0.04
SPEN-205ENST00000487496 FKBP4Q02790 459 aaKnown RBP eCLIP14.78□□□□□ -0.04
SPEN-205ENST00000487496 RIC3Q7Z5B4 369 aa14.78□□□□□ -0.04
SPEN-205ENST00000487496 ZNF428Q96B54 188 aa14.78□□□□□ -0.04
SPEN-205ENST00000487496 ANKRD36CQ5JPF3 1778 aa14.78□□□□□ -0.04
SPEN-205ENST00000487496 GOLGA2Q08379 1002 aa14.77□□□□□ -0.05
SPEN-205ENST00000487496 TRIM28Q13263 835 aaKnown RBP14.77□□□□□ -0.05
SPEN-205ENST00000487496 TWISTNBQ3B726 338 aaPredicted RBP14.77□□□□□ -0.05
SPEN-205ENST00000487496 CC2D2BQ6DHV5 1058 aa14.77□□□□□ -0.05
SPEN-205ENST00000487496 DPY19L2Q6NUT2 758 aa14.77□□□□□ -0.05
SPEN-205ENST00000487496 WDR63Q8IWG1 891 aa14.77□□□□□ -0.05
SPEN-205ENST00000487496 CCDC88AQ3V6T2 1871 aa14.77□□□□□ -0.05
SPEN-205ENST00000487496 C16orf71Q8IYS4 520 aaPredicted RBP14.76□□□□□ -0.05
SPEN-205ENST00000487496 FAM89AQ96GI7 184 aa14.76□□□□□ -0.05
SPEN-205ENST00000487496 ZNF277Q9NRM2 450 aaPredicted RBP14.76□□□□□ -0.05
SPEN-205ENST00000487496 SNED1Q8TER0 1413 aa14.75□□□□□ -0.05
SPEN-205ENST00000487496 FANCIQ9NVI1 1328 aa14.75□□□□□ -0.05
SPEN-205ENST00000487496 TCERG1O14776 1098 aaKnown RBP14.75□□□□□ -0.05
SPEN-205ENST00000487496 PPEF1O14829 653 aaPredicted RBP14.75□□□□□ -0.05
SPEN-205ENST00000487496 HSPA6P17066 643 aa14.75□□□□□ -0.05
SPEN-205ENST00000487496 PSMD1Q99460 953 aa14.75□□□□□ -0.05
SPEN-205ENST00000487496 TIAM2Q8IVF5 1701 aa14.75□□□□□ -0.05
SPEN-205ENST00000487496 ABCC4O15439 1325 aa14.74□□□□□ -0.05
SPEN-205ENST00000487496 DDX58O95786 925 aaKnown RBP14.74□□□□□ -0.05
SPEN-205ENST00000487496 VEGFAP15692 232 aaPredicted RBP14.74□□□□□ -0.05
SPEN-205ENST00000487496 IARSP41252 1262 aaKnown RBP14.74□□□□□ -0.05
SPEN-205ENST00000487496 GRIPAP1Q4V328 841 aa14.74□□□□□ -0.05
SPEN-205ENST00000487496 SLC51AQ86UW1 340 aa14.74□□□□□ -0.05
SPEN-205ENST00000487496 RBM46Q8TBY0 533 aaKnown RBP14.74□□□□□ -0.05
SPEN-205ENST00000487496 MYD88Q99836 296 aa14.74□□□□□ -0.05
SPEN-205ENST00000487496 STK31Q9BXU1 1019 aa14.74□□□□□ -0.05
SPEN-205ENST00000487496 DICER1Q9UPY3 1922 aaKnown RBP14.73□□□□□ -0.05
SPEN-205ENST00000487496 POTECB2RU33 542 aa14.73□□□□□ -0.05
SPEN-205ENST00000487496 BBOX1O75936 387 aa14.73□□□□□ -0.05
SPEN-205ENST00000487496 RTL5Q5HYW3 569 aaPredicted RBP14.73□□□□□ -0.05
SPEN-205ENST00000487496 DDX46Q7L014 1031 aaKnown RBP14.73□□□□□ -0.05
SPEN-205ENST00000487496 METTL22Q9BUU2 404 aaPredicted RBP14.73□□□□□ -0.05
SPEN-205ENST00000487496 SPINK5Q9NQ38 1064 aaPredicted RBP14.73□□□□□ -0.05
SPEN-205ENST00000487496 ATP6V0A2Q9Y487 856 aa14.73□□□□□ -0.05
SPEN-205ENST00000487496 DDNO94850 711 aaPredicted RBP14.72□□□□□ -0.05
SPEN-205ENST00000487496 SLC4A2P04920 1241 aa14.72□□□□□ -0.05
SPEN-205ENST00000487496 SF3B3Q15393 1217 aaKnown RBP14.72□□□□□ -0.05
SPEN-205ENST00000487496 KSR2Q6VAB6 950 aa14.72□□□□□ -0.05
SPEN-205ENST00000487496 G2E3Q7L622 706 aa14.72□□□□□ -0.05
SPEN-205ENST00000487496 ZBTB38Q8NAP3 1195 aaPredicted RBP14.72□□□□□ -0.05
SPEN-205ENST00000487496 CCDC191Q8NCU4 936 aa14.72□□□□□ -0.05
SPEN-205ENST00000487496 TMX4Q9H1E5 349 aaPredicted RBP14.72□□□□□ -0.05
SPEN-205ENST00000487496 MAP3K2Q9Y2U5 619 aa14.72□□□□□ -0.05
SPEN-205ENST00000487496 PI4KAP2A4QPH2 592 aa14.71□□□□□ -0.05
SPEN-205ENST00000487496 IRS4O14654 1257 aaPredicted RBP14.71□□□□□ -0.05
SPEN-205ENST00000487496 VAMP4O75379 141 aa14.71□□□□□ -0.05
SPEN-205ENST00000487496 EXOSC9Q06265 439 aaKnown RBP14.71□□□□□ -0.05
SPEN-205ENST00000487496 GRAPQ13588 217 aa14.71□□□□□ -0.05
SPEN-205ENST00000487496 SP8Q8IXZ3 490 aa14.71□□□□□ -0.05
SPEN-205ENST00000487496 PI4KAP1Q8N8J0 262 aa14.71□□□□□ -0.05
SPEN-205ENST00000487496 GRAPLQ8TC17 118 aaPredicted RBP14.71□□□□□ -0.05
SPEN-205ENST00000487496 FZD9O00144 591 aa14.7□□□□□ -0.06
SPEN-205ENST00000487496 FSTL1Q12841 308 aa14.7□□□□□ -0.06
SPEN-205ENST00000487496 JDP2Q8WYK2 163 aa14.7□□□□□ -0.06
SPEN-205ENST00000487496 MYH16Q9H6N6 1097 aa14.7□□□□□ -0.06
SPEN-205ENST00000487496 CWC25Q9NXE8 425 aaPredicted RBP14.7□□□□□ -0.06
SPEN-205ENST00000487496 WDR90Q96KV7 1748 aa14.69□□□□□ -0.06
SPEN-205ENST00000487496 ZNF541Q9H0D2 1346 aa14.69□□□□□ -0.06
SPEN-205ENST00000487496 SMC1BQ8NDV3 1235 aa14.69□□□□□ -0.06
SPEN-205ENST00000487496 LAMB2P55268 1798 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms