RNA–Protein interactions for RNA: ENST00000487194.1

VAMP3-203, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 4

Gene VAMP3, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-203ENST00000487194 HSP90B1P14625 803 aaKnown RBP7.59□□□□□ -1.19
VAMP3-203ENST00000487194 PARP10Q53GL7 1025 aa7.59□□□□□ -1.19
VAMP3-203ENST00000487194 NLRP10Q86W26 655 aa7.59□□□□□ -1.19
VAMP3-203ENST00000487194 LINC00116Q8NCU8 138 aa7.59□□□□□ -1.19
VAMP3-203ENST00000487194 RHPN1Q8TCX5 695 aa7.59□□□□□ -1.19
VAMP3-203ENST00000487194 UPF2Q9HAU5 1272 aaKnown RBP7.59□□□□□ -1.19
VAMP3-203ENST00000487194 COPRSQ9NQ92 184 aa7.59□□□□□ -1.19
VAMP3-203ENST00000487194 RGS17Q9UGC6 210 aaPredicted RBP7.59□□□□□ -1.19
VAMP3-203ENST00000487194 AOX1Q06278 1338 aa7.58□□□□□ -1.2
VAMP3-203ENST00000487194 SBF2Q86WG5 1849 aa7.58□□□□□ -1.2
VAMP3-203ENST00000487194 CAMTA2O94983 1202 aa7.58□□□□□ -1.2
VAMP3-203ENST00000487194 RXRBP28702 533 aa7.58□□□□□ -1.2
VAMP3-203ENST00000487194 ANP32AP39687 249 aaKnown RBP7.58□□□□□ -1.2
VAMP3-203ENST00000487194 FOXO4P98177 505 aa7.58□□□□□ -1.2
VAMP3-203ENST00000487194 HLFQ16534 295 aa7.58□□□□□ -1.2
VAMP3-203ENST00000487194 EPHA10Q5JZY3 1008 aa7.58□□□□□ -1.2
VAMP3-203ENST00000487194 FAM182BQ5T319 152 aa7.58□□□□□ -1.2
VAMP3-203ENST00000487194 TTC22Q5TAA0 569 aa7.58□□□□□ -1.2
VAMP3-203ENST00000487194 CLEC4GQ6UXB4 293 aa7.58□□□□□ -1.2
VAMP3-203ENST00000487194 C16orf71Q8IYS4 520 aaPredicted RBP7.58□□□□□ -1.2
VAMP3-203ENST00000487194 ZNF34Q8IZ26 560 aa7.58□□□□□ -1.2
VAMP3-203ENST00000487194 CLASRPQ8N2M8 674 aaKnown RBP7.58□□□□□ -1.2
VAMP3-203ENST00000487194 AK7Q96M32 723 aa7.58□□□□□ -1.2
VAMP3-203ENST00000487194 PLA2G12BQ9BX93 195 aa7.58□□□□□ -1.2
VAMP3-203ENST00000487194 STAP2Q9UGK3 403 aa7.58□□□□□ -1.2
VAMP3-203ENST00000487194 TBC1D2BQ9UPU7 963 aa7.58□□□□□ -1.2
VAMP3-203ENST00000487194 ANKRD36CQ5JPF3 1778 aa7.57□□□□□ -1.2
VAMP3-203ENST00000487194 RPS6KA4O75676 772 aa7.57□□□□□ -1.2
VAMP3-203ENST00000487194 MX1P20591 662 aa7.57□□□□□ -1.2
VAMP3-203ENST00000487194 GPTP24298 496 aa7.57□□□□□ -1.2
VAMP3-203ENST00000487194 PDE1AP54750 535 aa7.57□□□□□ -1.2
VAMP3-203ENST00000487194 SLC27A3Q5K4L6 730 aa7.57□□□□□ -1.2
VAMP3-203ENST00000487194 CASC1Q6TDU7 716 aa7.57□□□□□ -1.2
VAMP3-203ENST00000487194 LMBR1LQ6UX01 489 aa7.57□□□□□ -1.2
VAMP3-203ENST00000487194 PTF1AQ7RTS3 328 aa7.57□□□□□ -1.2
VAMP3-203ENST00000487194 UPF1Q92900 1129 aaKnown RBP eCLIP7.57□□□□□ -1.2
VAMP3-203ENST00000487194 GPATCH3Q96I76 525 aa7.57□□□□□ -1.2
VAMP3-203ENST00000487194 TRMT112Q9UI30 125 aaKnown RBP7.57□□□□□ -1.2
VAMP3-203ENST00000487194 FBXO3Q9UK99 471 aa7.57□□□□□ -1.2
VAMP3-203ENST00000487194 MYH14Q7Z406 1995 aaKnown RBP7.57□□□□□ -1.2
VAMP3-203ENST00000487194 SALL3Q9BXA9 1300 aa7.56□□□□□ -1.2
VAMP3-203ENST00000487194 LY75O60449 1722 aa7.56□□□□□ -1.2
VAMP3-203ENST00000487194 CDC45O75419 566 aa7.56□□□□□ -1.2
VAMP3-203ENST00000487194 CSF1RP07333 972 aa7.56□□□□□ -1.2
VAMP3-203ENST00000487194 IFIT2P09913 472 aaKnown RBP7.56□□□□□ -1.2
VAMP3-203ENST00000487194 ADRA2BP18089 450 aa7.56□□□□□ -1.2
VAMP3-203ENST00000487194 RFX5P48382 616 aaPredicted RBP7.56□□□□□ -1.2
VAMP3-203ENST00000487194 PTPN12Q05209 780 aaKnown RBP7.56□□□□□ -1.2
VAMP3-203ENST00000487194 CCDC57Q2TAC2 916 aa7.56□□□□□ -1.2
VAMP3-203ENST00000487194 OTUD7AQ8TE49 926 aaPredicted RBP7.56□□□□□ -1.2
VAMP3-203ENST00000487194 JARID2Q92833 1246 aaPredicted RBP7.56□□□□□ -1.2
VAMP3-203ENST00000487194 UTP14AQ9BVJ6 771 aaKnown RBP7.56□□□□□ -1.2
VAMP3-203ENST00000487194 BCL11AQ9H165 835 aa7.56□□□□□ -1.2
VAMP3-203ENST00000487194 IL1RAPL2Q9NP60 686 aa7.56□□□□□ -1.2
VAMP3-203ENST00000487194 NARFQ9UHQ1 456 aa7.56□□□□□ -1.2
VAMP3-203ENST00000487194 PA2G4Q9UQ80 394 aaKnown RBP7.56□□□□□ -1.2
VAMP3-203ENST00000487194 CHMP3Q9Y3E7 222 aa7.56□□□□□ -1.2
VAMP3-203ENST00000487194 RTCBQ9Y3I0 505 aaKnown RBP7.56□□□□□ -1.2
VAMP3-203ENST00000487194 NUP98P52948 1817 aa7.56□□□□□ -1.2
VAMP3-203ENST00000487194 TTC41PQ6P2S7 1318 aa7.55□□□□□ -1.2
VAMP3-203ENST00000487194 SH3TC1Q8TE82 1336 aa7.55□□□□□ -1.2
VAMP3-203ENST00000487194 USP42Q9H9J4 1324 aaKnown RBP7.55□□□□□ -1.2
VAMP3-203ENST00000487194 BRWD3Q6RI45 1802 aa7.55□□□□□ -1.2
VAMP3-203ENST00000487194 IRS4O14654 1257 aaPredicted RBP7.55□□□□□ -1.2
VAMP3-203ENST00000487194 ERC2O15083 957 aa7.55□□□□□ -1.2
VAMP3-203ENST00000487194 GNPATO15228 680 aa7.55□□□□□ -1.2
VAMP3-203ENST00000487194 PDE8AO60658 829 aa7.55□□□□□ -1.2
VAMP3-203ENST00000487194 ZPR1O75312 459 aa7.55□□□□□ -1.2
VAMP3-203ENST00000487194 CIAO1O76071 339 aa7.55□□□□□ -1.2
VAMP3-203ENST00000487194 GSPT1P15170 499 aaKnown RBP7.55□□□□□ -1.2
VAMP3-203ENST00000487194 IL15P40933 162 aaPredicted RBP7.55□□□□□ -1.2
VAMP3-203ENST00000487194 RTL5Q5HYW3 569 aaPredicted RBP7.55□□□□□ -1.2
VAMP3-203ENST00000487194 FAM89AQ96GI7 184 aa7.55□□□□□ -1.2
VAMP3-203ENST00000487194 SIL1Q9H173 461 aa7.55□□□□□ -1.2
VAMP3-203ENST00000487194 NIP7Q9Y221 180 aaKnown RBP eCLIP7.55□□□□□ -1.2
VAMP3-203ENST00000487194 UBN2Q6ZU65 1347 aa7.54□□□□□ -1.2
VAMP3-203ENST00000487194 EYA2O00167 538 aa7.54□□□□□ -1.2
VAMP3-203ENST00000487194 PLSCR1O15162 318 aa7.54□□□□□ -1.2
VAMP3-203ENST00000487194 GLRX3O76003 335 aaKnown RBP7.54□□□□□ -1.2
VAMP3-203ENST00000487194 SASH1O94885 1247 aa7.54□□□□□ -1.2
VAMP3-203ENST00000487194 TRIM37O94972 964 aa7.54□□□□□ -1.2
VAMP3-203ENST00000487194 CTSWP56202 376 aa7.54□□□□□ -1.2
VAMP3-203ENST00000487194 IFIT5Q13325 482 aaKnown RBP7.54□□□□□ -1.2
VAMP3-203ENST00000487194 TAF7LQ5H9L4 462 aa7.54□□□□□ -1.2
VAMP3-203ENST00000487194 TRAPPC3LQ5T215 181 aa7.54□□□□□ -1.2
VAMP3-203ENST00000487194 SUSD4Q5VX71 490 aa7.54□□□□□ -1.2
VAMP3-203ENST00000487194 POTEAQ6S8J7 498 aa7.54□□□□□ -1.2
VAMP3-203ENST00000487194 AACSQ86V21 672 aa7.54□□□□□ -1.2
VAMP3-203ENST00000487194 NUTM1Q86Y26 1132 aa7.54□□□□□ -1.2
VAMP3-203ENST00000487194 KLHDC4Q8TBB5 520 aa7.54□□□□□ -1.2
VAMP3-203ENST00000487194 DDRGK1Q96HY6 314 aa7.54□□□□□ -1.2
VAMP3-203ENST00000487194 NYXQ9GZU5 481 aa7.54□□□□□ -1.2
VAMP3-203ENST00000487194 GPR108Q9NPR9 543 aa7.54□□□□□ -1.2
VAMP3-203ENST00000487194 ECHDC1Q9NTX5 307 aa7.54□□□□□ -1.2
VAMP3-203ENST00000487194 BCORQ6W2J9 1755 aa7.54□□□□□ -1.2
VAMP3-203ENST00000487194 C4BP0C0L5 1744 aa7.53□□□□□ -1.2
VAMP3-203ENST00000487194 TAF1LQ8IZX4 1826 aa7.53□□□□□ -1.2
VAMP3-203ENST00000487194 ANKRD18BA2A2Z9 1011 aa7.53□□□□□ -1.2
VAMP3-203ENST00000487194 SDSP20132 328 aa7.53□□□□□ -1.2
VAMP3-203ENST00000487194 RFC4P35249 363 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms