RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 INTS5Q6P9B9 1019 aaKnown RBP14.27□□□□□ -0.13
PRKCB-207ENST00000486868 ACSBG1Q96GR2 724 aa14.27□□□□□ -0.13
PRKCB-207ENST00000486868 GPATCH3Q96I76 525 aa14.27□□□□□ -0.13
PRKCB-207ENST00000486868 AK7Q96M32 723 aa14.27□□□□□ -0.13
PRKCB-207ENST00000486868 GLRX3O76003 335 aaKnown RBP14.26□□□□□ -0.13
PRKCB-207ENST00000486868 RC3H1Q5TC82 1133 aaKnown RBP14.26□□□□□ -0.13
PRKCB-207ENST00000486868 IL27Q8NEV9 243 aa14.26□□□□□ -0.13
PRKCB-207ENST00000486868 GPR108Q9NPR9 543 aa14.26□□□□□ -0.13
PRKCB-207ENST00000486868 TJP1Q07157 1748 aa14.26□□□□□ -0.13
PRKCB-207ENST00000486868 RREB1Q92766 1687 aa14.26□□□□□ -0.13
PRKCB-207ENST00000486868 CNTNAP4Q9C0A0 1308 aa14.25□□□□□ -0.13
PRKCB-207ENST00000486868 CIAO1O76071 339 aa14.25□□□□□ -0.13
PRKCB-207ENST00000486868 SASH1O94885 1247 aa14.25□□□□□ -0.13
PRKCB-207ENST00000486868 CSF1RP07333 972 aa14.25□□□□□ -0.13
PRKCB-207ENST00000486868 HMGB2P26583 209 aaKnown RBP14.25□□□□□ -0.13
PRKCB-207ENST00000486868 CRKLP46109 303 aaKnown RBP14.25□□□□□ -0.13
PRKCB-207ENST00000486868 MFAP1P55081 439 aaKnown RBP14.25□□□□□ -0.13
PRKCB-207ENST00000486868 BECN1Q14457 450 aa14.25□□□□□ -0.13
PRKCB-207ENST00000486868 TICAM2Q86XR7 235 aa14.25□□□□□ -0.13
PRKCB-207ENST00000486868 DZIP3Q86Y13 1208 aaKnown RBP14.25□□□□□ -0.13
PRKCB-207ENST00000486868 ZNF34Q8IZ26 560 aa14.25□□□□□ -0.13
PRKCB-207ENST00000486868 PI4K2BQ8TCG2 481 aa14.25□□□□□ -0.13
PRKCB-207ENST00000486868 IL1RAPL2Q9NP60 686 aa14.25□□□□□ -0.13
PRKCB-207ENST00000486868 PA2G4Q9UQ80 394 aaKnown RBP14.25□□□□□ -0.13
PRKCB-207ENST00000486868 REC8O95072 547 aa14.24□□□□□ -0.13
PRKCB-207ENST00000486868 IFIT2P09913 472 aaKnown RBP14.24□□□□□ -0.13
PRKCB-207ENST00000486868 HSP90B1P14625 803 aaKnown RBP14.24□□□□□ -0.13
PRKCB-207ENST00000486868 ITPK1Q13572 414 aa14.24□□□□□ -0.13
PRKCB-207ENST00000486868 PARP10Q53GL7 1025 aa14.24□□□□□ -0.13
PRKCB-207ENST00000486868 LMBR1LQ6UX01 489 aa14.24□□□□□ -0.13
PRKCB-207ENST00000486868 CLEC4GQ6UXB4 293 aa14.24□□□□□ -0.13
PRKCB-207ENST00000486868 NLRP10Q86W26 655 aa14.24□□□□□ -0.13
PRKCB-207ENST00000486868 ECHDC1Q9NTX5 307 aa14.24□□□□□ -0.13
PRKCB-207ENST00000486868 KCNQ2O43526 872 aa14.23□□□□□ -0.13
PRKCB-207ENST00000486868 IL15P40933 162 aaPredicted RBP14.23□□□□□ -0.13
PRKCB-207ENST00000486868 HLFQ16534 295 aa14.22□□□□□ -0.13
PRKCB-207ENST00000486868 NUTM1Q86Y26 1132 aa14.22□□□□□ -0.13
PRKCB-207ENST00000486868 CNTROBQ8N137 903 aa14.22□□□□□ -0.13
PRKCB-207ENST00000486868 DAXXQ9UER7 740 aaPredicted RBP14.22□□□□□ -0.13
PRKCB-207ENST00000486868 CAMTA2O94983 1202 aa14.21□□□□□ -0.13
PRKCB-207ENST00000486868 SNX21Q969T3 373 aa14.21□□□□□ -0.13
PRKCB-207ENST00000486868 USP26Q9BXU7 913 aa14.21□□□□□ -0.13
PRKCB-207ENST00000486868 ZNF652Q9Y2D9 606 aa14.21□□□□□ -0.13
PRKCB-207ENST00000486868 EYA2O00167 538 aa14.2□□□□□ -0.14
PRKCB-207ENST00000486868 CHMLP26374 656 aa14.2□□□□□ -0.14
PRKCB-207ENST00000486868 ERICH6Q7L0X2 663 aa14.2□□□□□ -0.14
PRKCB-207ENST00000486868 AACSQ86V21 672 aa14.2□□□□□ -0.14
PRKCB-207ENST00000486868 SEPT12Q8IYM1 358 aa14.2□□□□□ -0.14
PRKCB-207ENST00000486868 EAF2Q96CJ1 260 aaPredicted RBP14.2□□□□□ -0.14
PRKCB-207ENST00000486868 IL17RAQ96F46 866 aa14.2□□□□□ -0.14
PRKCB-207ENST00000486868 QTRT2Q9H974 415 aaKnown RBP14.2□□□□□ -0.14
PRKCB-207ENST00000486868 ZNF330Q9Y3S2 320 aaPredicted RBP14.2□□□□□ -0.14
PRKCB-207ENST00000486868 AFDNP55196 1824 aaKnown RBP14.2□□□□□ -0.14
PRKCB-207ENST00000486868 A0A0G2JS52 829 aa14.19□□□□□ -0.14
PRKCB-207ENST00000486868 HIP1O00291 1037 aa14.19□□□□□ -0.14
PRKCB-207ENST00000486868 PDE8AO60658 829 aa14.19□□□□□ -0.14
PRKCB-207ENST00000486868 MYT1Q01538 1121 aa14.19□□□□□ -0.14
PRKCB-207ENST00000486868 CCDC57Q2TAC2 916 aa14.19□□□□□ -0.14
PRKCB-207ENST00000486868 TNNI3KQ59H18 835 aa14.19□□□□□ -0.14
PRKCB-207ENST00000486868 EVI5LQ96CN4 794 aa14.19□□□□□ -0.14
PRKCB-207ENST00000486868 ESYT1Q9BSJ8 1104 aa14.19□□□□□ -0.14
PRKCB-207ENST00000486868 BCL11BQ9C0K0 894 aaPredicted RBP14.19□□□□□ -0.14
PRKCB-207ENST00000486868 FPGT-TNNI3KV9GXZ4 949 aa14.19□□□□□ -0.14
PRKCB-207ENST00000486868 NHSQ6T4R5 1651 aa14.18□□□□□ -0.14
PRKCB-207ENST00000486868 TRIM6-TRIM34B2RNG4 842 aa14.18□□□□□ -0.14
PRKCB-207ENST00000486868 RPS6KA4O75676 772 aa14.18□□□□□ -0.14
PRKCB-207ENST00000486868 ATP5JP18859 108 aa14.18□□□□□ -0.14
PRKCB-207ENST00000486868 ATG9AQ7Z3C6 839 aa14.18□□□□□ -0.14
PRKCB-207ENST00000486868 JARID2Q92833 1246 aaPredicted RBP14.18□□□□□ -0.14
PRKCB-207ENST00000486868 TBC1D2BQ9UPU7 963 aa14.18□□□□□ -0.14
PRKCB-207ENST00000486868 IRS4O14654 1257 aaPredicted RBP14.17□□□□□ -0.14
PRKCB-207ENST00000486868 CTSWP56202 376 aa14.17□□□□□ -0.14
PRKCB-207ENST00000486868 FAM196AQ6ZSG2 479 aa14.17□□□□□ -0.14
PRKCB-207ENST00000486868 LINC00116Q8NCU8 138 aa14.17□□□□□ -0.14
PRKCB-207ENST00000486868 TTLL11Q8NHH1 800 aa14.17□□□□□ -0.14
PRKCB-207ENST00000486868 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.17□□□□□ -0.14
PRKCB-207ENST00000486868 RUFY2Q8WXA3 655 aa14.17□□□□□ -0.14
PRKCB-207ENST00000486868 FAM89AQ96GI7 184 aa14.17□□□□□ -0.14
PRKCB-207ENST00000486868 UTP14AQ9BVJ6 771 aaKnown RBP14.17□□□□□ -0.14
PRKCB-207ENST00000486868 SIL1Q9H173 461 aa14.17□□□□□ -0.14
PRKCB-207ENST00000486868 TRMT112Q9UI30 125 aaKnown RBP14.17□□□□□ -0.14
PRKCB-207ENST00000486868 AKAP2Q9Y2D5 859 aa14.17□□□□□ -0.14
PRKCB-207ENST00000486868 RFX7Q2KHR2 1363 aa14.17□□□□□ -0.14
PRKCB-207ENST00000486868 SH3TC1Q8TE82 1336 aa14.16□□□□□ -0.14
PRKCB-207ENST00000486868 ANAPC15P60006 121 aa14.16□□□□□ -0.14
PRKCB-207ENST00000486868 TFCP2Q12800 502 aa14.16□□□□□ -0.14
PRKCB-207ENST00000486868 IFIT5Q13325 482 aaKnown RBP14.16□□□□□ -0.14
PRKCB-207ENST00000486868 TSHZ3Q63HK5 1081 aa14.16□□□□□ -0.14
PRKCB-207ENST00000486868 ZNF772Q68DY9 489 aaPredicted RBP14.16□□□□□ -0.14
PRKCB-207ENST00000486868 KLHDC4Q8TBB5 520 aa14.16□□□□□ -0.14
PRKCB-207ENST00000486868 RILPL2Q969X0 211 aa14.16□□□□□ -0.14
PRKCB-207ENST00000486868 ARXQ96QS3 562 aa14.16□□□□□ -0.14
PRKCB-207ENST00000486868 KIF2CQ99661 725 aa14.16□□□□□ -0.14
PRKCB-207ENST00000486868 RTL9Q8NET4 1388 aa14.16□□□□□ -0.14
PRKCB-207ENST00000486868 UBN2Q6ZU65 1347 aa14.15□□□□□ -0.14
PRKCB-207ENST00000486868 RABEP1Q15276 862 aa14.15□□□□□ -0.14
PRKCB-207ENST00000486868 SNRKQ9NRH2 765 aa14.15□□□□□ -0.14
PRKCB-207ENST00000486868 CEP126Q9P2H0 1117 aa14.15□□□□□ -0.14
PRKCB-207ENST00000486868 CHMP3Q9Y3E7 222 aa14.15□□□□□ -0.14
PRKCB-207ENST00000486868 TUBGCP6Q96RT7 1819 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms