RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 FOXD4L4Q8WXT5 416 aaPredicted RBP21.68■■□□□ 1.06
PDLIM7-207ENST00000486828 KCNB2Q92953 911 aa21.68■■□□□ 1.06
PDLIM7-207ENST00000486828 CCDC8Q9H0W5 538 aaPredicted RBP21.68■■□□□ 1.06
PDLIM7-207ENST00000486828 SIL1Q9H173 461 aa21.68■■□□□ 1.06
PDLIM7-207ENST00000486828 PTH1RQ03431 593 aa21.67■■□□□ 1.06
PDLIM7-207ENST00000486828 RRAGDQ9NQL2 400 aaPredicted RBP21.67■■□□□ 1.06
PDLIM7-207ENST00000486828 ARFGEF2Q9Y6D5 1785 aa21.67■■□□□ 1.06
PDLIM7-207ENST00000486828 AK2P54819 239 aa21.67■■□□□ 1.06
PDLIM7-207ENST00000486828 CHAMP1Q96JM3 812 aa21.67■■□□□ 1.06
PDLIM7-207ENST00000486828 TLR7Q9NYK1 1049 aaKnown RBP21.67■■□□□ 1.06
PDLIM7-207ENST00000486828 AFDNP55196 1824 aaKnown RBP21.66■■□□□ 1.06
PDLIM7-207ENST00000486828 KLHDC4Q8TBB5 520 aa21.66■■□□□ 1.06
PDLIM7-207ENST00000486828 COPRSQ9NQ92 184 aa21.66■■□□□ 1.06
PDLIM7-207ENST00000486828 LIMCH1Q9UPQ0 1083 aa21.66■■□□□ 1.06
PDLIM7-207ENST00000486828 PIP4K2AP48426 406 aaPredicted RBP21.65■■□□□ 1.06
PDLIM7-207ENST00000486828 CCDC171Q6TFL3 1326 aa21.65■■□□□ 1.06
PDLIM7-207ENST00000486828 WDR33Q9C0J8 1336 aaKnown RBP21.65■■□□□ 1.06
PDLIM7-207ENST00000486828 RUFY3Q7L099 469 aa21.65■■□□□ 1.06
PDLIM7-207ENST00000486828 TM6SF1Q9BZW5 370 aa21.65■■□□□ 1.06
PDLIM7-207ENST00000486828 SNRKQ9NRH2 765 aa21.65■■□□□ 1.06
PDLIM7-207ENST00000486828 COL22A1Q8NFW1 1626 aaPredicted RBP21.64■■□□□ 1.06
PDLIM7-207ENST00000486828 CASTP20810 708 aaKnown RBP21.64■■□□□ 1.05
PDLIM7-207ENST00000486828 RFX5P48382 616 aaPredicted RBP21.64■■□□□ 1.05
PDLIM7-207ENST00000486828 RABL6Q3YEC7 729 aaPredicted RBP21.64■■□□□ 1.05
PDLIM7-207ENST00000486828 PRPF40BQ6NWY9 871 aaKnown RBP21.64■■□□□ 1.05
PDLIM7-207ENST00000486828 ABCA3Q99758 1704 aa21.63■■□□□ 1.05
PDLIM7-207ENST00000486828 MBD3O95983 291 aa21.63■■□□□ 1.05
PDLIM7-207ENST00000486828 NMIQ13287 307 aaPredicted RBP21.63■■□□□ 1.05
PDLIM7-207ENST00000486828 NECTIN1Q15223 517 aa21.63■■□□□ 1.05
PDLIM7-207ENST00000486828 PLBD2Q8NHP8 589 aa21.63■■□□□ 1.05
PDLIM7-207ENST00000486828 ERBB4Q15303 1308 aa21.63■■□□□ 1.05
PDLIM7-207ENST00000486828 WDR17Q8IZU2 1322 aa21.63■■□□□ 1.05
PDLIM7-207ENST00000486828 NASPP49321 788 aaPredicted RBP21.63■■□□□ 1.05
PDLIM7-207ENST00000486828 PCDH11XQ9BZA7 1347 aa21.63■■□□□ 1.05
PDLIM7-207ENST00000486828 PCDH11YQ9BZA8 1340 aa21.63■■□□□ 1.05
PDLIM7-207ENST00000486828 RPAP1Q9BWH6 1393 aaPredicted RBP21.62■■□□□ 1.05
PDLIM7-207ENST00000486828 VPS53Q5VIR6 699 aa21.62■■□□□ 1.05
PDLIM7-207ENST00000486828 UBE3BQ7Z3V4 1068 aa21.62■■□□□ 1.05
PDLIM7-207ENST00000486828 FAM227BQ96M60 508 aa21.62■■□□□ 1.05
PDLIM7-207ENST00000486828 BOLA2Q9H3K6 86 aa21.62■■□□□ 1.05
PDLIM7-207ENST00000486828 ZSWIM6Q9HCJ5 1215 aa21.62■■□□□ 1.05
PDLIM7-207ENST00000486828 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.62■■□□□ 1.05
PDLIM7-207ENST00000486828 PTPN12Q05209 780 aaKnown RBP21.61■■□□□ 1.05
PDLIM7-207ENST00000486828 MAP4K1Q92918 833 aa21.61■■□□□ 1.05
PDLIM7-207ENST00000486828 JAKMIP1Q96N16 626 aaKnown RBP21.61■■□□□ 1.05
PDLIM7-207ENST00000486828 ADCK5Q3MIX3 580 aa21.61■■□□□ 1.05
PDLIM7-207ENST00000486828 ZCRB1Q8TBF4 217 aaKnown RBP21.61■■□□□ 1.05
PDLIM7-207ENST00000486828 FSD1Q9BTV5 496 aa21.61■■□□□ 1.05
PDLIM7-207ENST00000486828 PDRG1Q9NUG6 133 aa21.61■■□□□ 1.05
PDLIM7-207ENST00000486828 RBM27Q9P2N5 1060 aaKnown RBP21.61■■□□□ 1.05
PDLIM7-207ENST00000486828 RBM8AQ9Y5S9 174 aaKnown RBP21.61■■□□□ 1.05
PDLIM7-207ENST00000486828 CYP46A1Q9Y6A2 500 aa21.61■■□□□ 1.05
PDLIM7-207ENST00000486828 JCADQ9P266 1359 aa21.6■■□□□ 1.05
PDLIM7-207ENST00000486828 A0A087WZG4 1122 aa21.6■■□□□ 1.05
PDLIM7-207ENST00000486828 CPA1P15085 419 aa21.6■■□□□ 1.05
PDLIM7-207ENST00000486828 ZKSCAN1P17029 563 aaPredicted RBP21.6■■□□□ 1.05
PDLIM7-207ENST00000486828 CASP7P55210 303 aa21.6■■□□□ 1.05
PDLIM7-207ENST00000486828 JARID2Q92833 1246 aaPredicted RBP21.6■■□□□ 1.05
PDLIM7-207ENST00000486828 PRDM11Q9NQV5 511 aa21.6■■□□□ 1.05
PDLIM7-207ENST00000486828 ATP5J2-PTCD1G3V325 749 aa21.59■■□□□ 1.05
PDLIM7-207ENST00000486828 PTCD1O75127 700 aaKnown RBP21.59■■□□□ 1.05
PDLIM7-207ENST00000486828 CCDC173Q0VFZ6 552 aa21.59■■□□□ 1.05
PDLIM7-207ENST00000486828 TMEM63CQ9P1W3 806 aa21.59■■□□□ 1.05
PDLIM7-207ENST00000486828 NSFL1CQ9UNZ2 370 aaKnown RBP21.59■■□□□ 1.05
PDLIM7-207ENST00000486828 UBR2Q8IWV8 1755 aa21.59■■□□□ 1.05
PDLIM7-207ENST00000486828 MED23Q9ULK4 1368 aa21.59■■□□□ 1.05
PDLIM7-207ENST00000486828 ERVV-2B6SEH9 535 aa21.59■■□□□ 1.05
PDLIM7-207ENST00000486828 TNNI3KQ59H18 835 aa21.59■■□□□ 1.05
PDLIM7-207ENST00000486828 CREB3L3Q68CJ9 461 aa21.59■■□□□ 1.05
PDLIM7-207ENST00000486828 TOM1L2Q6ZVM7 507 aa21.59■■□□□ 1.05
PDLIM7-207ENST00000486828 ZSCAN31Q96LW9 406 aaPredicted RBP21.59■■□□□ 1.05
PDLIM7-207ENST00000486828 FPGT-TNNI3KV9GXZ4 949 aa21.59■■□□□ 1.05
PDLIM7-207ENST00000486828 COL5A2P05997 1499 aaPredicted RBP21.58■■□□□ 1.05
PDLIM7-207ENST00000486828 A0A0D9SFI3 127 aa21.58■■□□□ 1.04
PDLIM7-207ENST00000486828 ATP5JP18859 108 aa21.58■■□□□ 1.04
PDLIM7-207ENST00000486828 PPP1R9BQ96SB3 815 aa21.58■■□□□ 1.04
PDLIM7-207ENST00000486828 NBPF26B4DH59 902 aa21.57■■□□□ 1.04
PDLIM7-207ENST00000486828 TFCP2Q12800 502 aa21.57■■□□□ 1.04
PDLIM7-207ENST00000486828 NBPF14Q5TI25 921 aa21.57■■□□□ 1.04
PDLIM7-207ENST00000486828 NBPF10Q6P3W6 841 aaKnown RBP21.57■■□□□ 1.04
PDLIM7-207ENST00000486828 NBPF15Q8N660 670 aa21.57■■□□□ 1.04
PDLIM7-207ENST00000486828 LARP6Q9BRS8 491 aaKnown RBP21.57■■□□□ 1.04
PDLIM7-207ENST00000486828 SH2B1Q9NRF2 756 aaPredicted RBP21.57■■□□□ 1.04
PDLIM7-207ENST00000486828 DBNLQ9UJU6 430 aaKnown RBP21.57■■□□□ 1.04
PDLIM7-207ENST00000486828 SMC3Q9UQE7 1217 aa21.57■■□□□ 1.04
PDLIM7-207ENST00000486828 PAPPAQ13219 1627 aa21.57■■□□□ 1.04
PDLIM7-207ENST00000486828 LARGE1O95461 756 aa21.57■■□□□ 1.04
PDLIM7-207ENST00000486828 KCNJ4P48050 445 aa21.57■■□□□ 1.04
PDLIM7-207ENST00000486828 ANP32BQ92688 251 aaKnown RBP21.57■■□□□ 1.04
PDLIM7-207ENST00000486828 TRIM44Q96DX7 344 aaPredicted RBP21.57■■□□□ 1.04
PDLIM7-207ENST00000486828 KCPQ6ZWJ8 1503 aa21.56■■□□□ 1.04
PDLIM7-207ENST00000486828 PRIM1P49642 420 aaKnown RBP21.56■■□□□ 1.04
PDLIM7-207ENST00000486828 NKX1-1Q15270 411 aaPredicted RBP21.56■■□□□ 1.04
PDLIM7-207ENST00000486828 NUP188Q5SRE5 1749 aa21.56■■□□□ 1.04
PDLIM7-207ENST00000486828 SLC27A2O14975 620 aa21.55■■□□□ 1.04
PDLIM7-207ENST00000486828 ZSCAN22P10073 491 aaPredicted RBP21.55■■□□□ 1.04
PDLIM7-207ENST00000486828 LRSAM1Q6UWE0 723 aa21.55■■□□□ 1.04
PDLIM7-207ENST00000486828 H7C1W4 665 aa21.55■■□□□ 1.04
PDLIM7-207ENST00000486828 STX6O43752 255 aa21.55■■□□□ 1.04
PDLIM7-207ENST00000486828 SYT1P21579 422 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms