RNA–Protein interactions for RNA: ENST00000486339.6

PKD1-219, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 4,443 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-219ENST00000486339 CFAP45Q9UL16 551 aa15.92■□□□□ 0.14
PKD1-219ENST00000486339 NOL7Q9UMY1 257 aaKnown RBP15.92■□□□□ 0.14
PKD1-219ENST00000486339 DNAJC10Q8IXB1 793 aa15.91■□□□□ 0.14
PKD1-219ENST00000486339 METTL22Q9BUU2 404 aaPredicted RBP15.91■□□□□ 0.14
PKD1-219ENST00000486339 SYNMO15061 1565 aa15.91■□□□□ 0.14
PKD1-219ENST00000486339 CLTCL1P53675 1640 aa15.91■□□□□ 0.14
PKD1-219ENST00000486339 GNPATO15228 680 aa15.91■□□□□ 0.14
PKD1-219ENST00000486339 MCM4P33991 863 aa15.91■□□□□ 0.14
PKD1-219ENST00000486339 TBC1D32Q96NH3 1257 aa15.91■□□□□ 0.14
PKD1-219ENST00000486339 BICC1Q9H694 974 aaKnown RBP15.91■□□□□ 0.14
PKD1-219ENST00000486339 IQSEC3Q9UPP2 1182 aaPredicted RBP15.91■□□□□ 0.14
PKD1-219ENST00000486339 USP19O94966 1318 aa15.91■□□□□ 0.14
PKD1-219ENST00000486339 CCDC196A0A1B0GTZ2 297 aa15.91■□□□□ 0.14
PKD1-219ENST00000486339 ZFYP08048 801 aaPredicted RBP15.91■□□□□ 0.14
PKD1-219ENST00000486339 CEP89Q96ST8 783 aa15.91■□□□□ 0.14
PKD1-219ENST00000486339 NASPP49321 788 aaPredicted RBP15.91■□□□□ 0.14
PKD1-219ENST00000486339 SPATA32Q96LK8 384 aa15.91■□□□□ 0.14
PKD1-219ENST00000486339 ZNF444Q8N0Y2 327 aaPredicted RBP15.9■□□□□ 0.14
PKD1-219ENST00000486339 FAM89AQ96GI7 184 aa15.9■□□□□ 0.14
PKD1-219ENST00000486339 RNF17Q9BXT8 1623 aaKnown RBP15.9■□□□□ 0.14
PKD1-219ENST00000486339 MAP3K4Q9Y6R4 1608 aa15.9■□□□□ 0.14
PKD1-219ENST00000486339 KIAA0232Q92628 1395 aa15.9■□□□□ 0.14
PKD1-219ENST00000486339 PHKG2P15735 406 aa15.9■□□□□ 0.14
PKD1-219ENST00000486339 HAND2P61296 217 aa15.9■□□□□ 0.14
PKD1-219ENST00000486339 SPTY2D1Q68D10 685 aaPredicted RBP15.9■□□□□ 0.14
PKD1-219ENST00000486339 CCAR1Q8IX12 1150 aaKnown RBP15.9■□□□□ 0.14
PKD1-219ENST00000486339 MPHOSPH10O00566 681 aaKnown RBP15.9■□□□□ 0.14
PKD1-219ENST00000486339 IFIT3O14879 490 aaKnown RBP15.9■□□□□ 0.14
PKD1-219ENST00000486339 CCNL1Q9UK58 526 aaPredicted RBP15.9■□□□□ 0.14
PKD1-219ENST00000486339 BAG3O95817 575 aa15.89■□□□□ 0.13
PKD1-219ENST00000486339 CTCFLQ8NI51 663 aaPredicted RBP15.89■□□□□ 0.13
PKD1-219ENST00000486339 ERVV-2B6SEH9 535 aa15.89■□□□□ 0.13
PKD1-219ENST00000486339 HMG20BQ9P0W2 317 aa15.89■□□□□ 0.13
PKD1-219ENST00000486339 USP21Q9UK80 565 aa15.89■□□□□ 0.13
PKD1-219ENST00000486339 ZNF335Q9H4Z2 1342 aaPredicted RBP15.89■□□□□ 0.13
PKD1-219ENST00000486339 HELBQ8NG08 1087 aaPredicted RBP15.88■□□□□ 0.13
PKD1-219ENST00000486339 TTC41PQ6P2S7 1318 aa15.88■□□□□ 0.13
PKD1-219ENST00000486339 CCDC191Q8NCU4 936 aa15.88■□□□□ 0.13
PKD1-219ENST00000486339 ESYT1Q9BSJ8 1104 aa15.88■□□□□ 0.13
PKD1-219ENST00000486339 SH3TC1Q8TE82 1336 aa15.88■□□□□ 0.13
PKD1-219ENST00000486339 CCDC82Q8N4S0 544 aa15.88■□□□□ 0.13
PKD1-219ENST00000486339 NEK1Q96PY6 1258 aa15.88■□□□□ 0.13
PKD1-219ENST00000486339 LARP6Q9BRS8 491 aaKnown RBP15.88■□□□□ 0.13
PKD1-219ENST00000486339 SLC12A7Q9Y666 1083 aa15.88■□□□□ 0.13
PKD1-219ENST00000486339 IGSF1Q8N6C5 1336 aa15.87■□□□□ 0.13
PKD1-219ENST00000486339 HMGN5P82970 282 aaKnown RBP15.87■□□□□ 0.13
PKD1-219ENST00000486339 ANO8Q9HCE9 1232 aaPredicted RBP15.87■□□□□ 0.13
PKD1-219ENST00000486339 GOLGA8BA8MQT2 603 aa15.87■□□□□ 0.13
PKD1-219ENST00000486339 GIGYF1O75420 1035 aaPredicted RBP15.87■□□□□ 0.13
PKD1-219ENST00000486339 TSPY26PQ9H489 355 aa15.87■□□□□ 0.13
PKD1-219ENST00000486339 KCNQ3O43525 872 aa15.86■□□□□ 0.13
PKD1-219ENST00000486339 PARP10Q53GL7 1025 aa15.86■□□□□ 0.13
PKD1-219ENST00000486339 TRAPPC3LQ5T215 181 aa15.86■□□□□ 0.13
PKD1-219ENST00000486339 PLEKHF1Q96S99 279 aa15.86■□□□□ 0.13
PKD1-219ENST00000486339 TNMDQ9H2S6 317 aa15.86■□□□□ 0.13
PKD1-219ENST00000486339 TFCP2Q12800 502 aa15.86■□□□□ 0.13
PKD1-219ENST00000486339 PLEKHM2Q8IWE5 1019 aa15.86■□□□□ 0.13
PKD1-219ENST00000486339 FAM13BQ9NYF5 915 aa15.86■□□□□ 0.13
PKD1-219ENST00000486339 SLC9C2Q5TAH2 1124 aa15.86■□□□□ 0.13
PKD1-219ENST00000486339 C8orf76Q96K31 380 aa15.86■□□□□ 0.13
PKD1-219ENST00000486339 CYP7A1P22680 504 aa15.85■□□□□ 0.13
PKD1-219ENST00000486339 TRIM5Q9C035 493 aa15.85■□□□□ 0.13
PKD1-219ENST00000486339 PAG1Q9NWQ8 432 aa15.85■□□□□ 0.13
PKD1-219ENST00000486339 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.85■□□□□ 0.13
PKD1-219ENST00000486339 CCT2P78371 535 aaKnown RBP15.85■□□□□ 0.13
PKD1-219ENST00000486339 CCDC87Q9NVE4 849 aa15.85■□□□□ 0.13
PKD1-219ENST00000486339 NSFL1CQ9UNZ2 370 aaKnown RBP15.85■□□□□ 0.13
PKD1-219ENST00000486339 NBPF7P0C2Y1 421 aaPredicted RBP15.85■□□□□ 0.13
PKD1-219ENST00000486339 MCMDC2Q4G0Z9 681 aa15.85■□□□□ 0.13
PKD1-219ENST00000486339 NCOA7Q8NI08 942 aa15.85■□□□□ 0.13
PKD1-219ENST00000486339 RBM8AQ9Y5S9 174 aaKnown RBP15.85■□□□□ 0.13
PKD1-219ENST00000486339 GOLGA8AA7E2F4 631 aa15.84■□□□□ 0.13
PKD1-219ENST00000486339 CCDC192P0DO97 292 aa15.84■□□□□ 0.13
PKD1-219ENST00000486339 MFSD6Q6ZSS7 791 aa15.84■□□□□ 0.13
PKD1-219ENST00000486339 KRT18P05783 430 aaKnown RBP15.84■□□□□ 0.13
PKD1-219ENST00000486339 CRNKL1Q9BZJ0 848 aaKnown RBP15.84■□□□□ 0.13
PKD1-219ENST00000486339 EYA2O00167 538 aa15.84■□□□□ 0.13
PKD1-219ENST00000486339 USP16Q9Y5T5 823 aa15.84■□□□□ 0.13
PKD1-219ENST00000486339 RTL1A6NKG5 1358 aa15.84■□□□□ 0.13
PKD1-219ENST00000486339 CROCC2H7BZ55 1655 aa15.84■□□□□ 0.13
PKD1-219ENST00000486339 SPHKAPQ2M3C7 1700 aa15.84■□□□□ 0.13
PKD1-219ENST00000486339 GCKRQ14397 625 aa15.84■□□□□ 0.13
PKD1-219ENST00000486339 NOC3LQ8WTT2 800 aaKnown RBP15.84■□□□□ 0.13
PKD1-219ENST00000486339 HCLS1P14317 486 aaPredicted RBP15.83■□□□□ 0.13
PKD1-219ENST00000486339 PDE4BQ07343 736 aa15.83■□□□□ 0.13
PKD1-219ENST00000486339 TMEM67Q5HYA8 995 aa15.83■□□□□ 0.13
PKD1-219ENST00000486339 ZGPATQ8N5A5 531 aaKnown RBP15.83■□□□□ 0.13
PKD1-219ENST00000486339 CARD10Q9BWT7 1032 aa15.83■□□□□ 0.13
PKD1-219ENST00000486339 SEC63Q9UGP8 760 aaKnown RBP15.83■□□□□ 0.13
PKD1-219ENST00000486339 ERBB3P21860 1342 aa15.83■□□□□ 0.12
PKD1-219ENST00000486339 TSPY2A6NKD2 308 aa15.83■□□□□ 0.12
PKD1-219ENST00000486339 GUCY1B3Q02153 619 aa15.83■□□□□ 0.12
PKD1-219ENST00000486339 CATIPQ7Z7H3 387 aa15.83■□□□□ 0.12
PKD1-219ENST00000486339 NAA16Q6N069 864 aaPredicted RBP15.83■□□□□ 0.12
PKD1-219ENST00000486339 KIF24Q5T7B8 1368 aa15.82■□□□□ 0.12
PKD1-219ENST00000486339 MICU3Q86XE3 530 aa15.82■□□□□ 0.12
PKD1-219ENST00000486339 GSTO1P78417 241 aa15.82■□□□□ 0.12
PKD1-219ENST00000486339 HOMER1Q86YM7 354 aa15.82■□□□□ 0.12
PKD1-219ENST00000486339 KLHDC4Q8TBB5 520 aa15.82■□□□□ 0.12
PKD1-219ENST00000486339 ZC3H12CQ9C0D7 883 aaKnown RBP15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms