RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 KIF6Q6ZMV9 814 aa14.56□□□□□ -0.08
PKP4-213ENST00000486254 AACSQ86V21 672 aa14.56□□□□□ -0.08
PKP4-213ENST00000486254 EVI5LQ96CN4 794 aa14.56□□□□□ -0.08
PKP4-213ENST00000486254 JCADQ9P266 1359 aa14.56□□□□□ -0.08
PKP4-213ENST00000486254 MAP3K15Q6ZN16 1313 aa14.56□□□□□ -0.08
PKP4-213ENST00000486254 RAD50Q92878 1312 aa14.56□□□□□ -0.08
PKP4-213ENST00000486254 CYP19A1P11511 503 aaPredicted RBP14.56□□□□□ -0.08
PKP4-213ENST00000486254 PIP4K2AP48426 406 aaPredicted RBP14.56□□□□□ -0.08
PKP4-213ENST00000486254 MCM2P49736 904 aa14.56□□□□□ -0.08
PKP4-213ENST00000486254 FOXO4P98177 505 aa14.56□□□□□ -0.08
PKP4-213ENST00000486254 UNC5CLQ8IV45 518 aa14.56□□□□□ -0.08
PKP4-213ENST00000486254 DNAJC10Q8IXB1 793 aa14.56□□□□□ -0.08
PKP4-213ENST00000486254 RUFY2Q8WXA3 655 aa14.56□□□□□ -0.08
PKP4-213ENST00000486254 RILPL2Q969X0 211 aa14.56□□□□□ -0.08
PKP4-213ENST00000486254 SNRKQ9NRH2 765 aa14.56□□□□□ -0.08
PKP4-213ENST00000486254 CDHR2Q9BYE9 1310 aa14.55□□□□□ -0.08
PKP4-213ENST00000486254 ERVV-1B6SEH8 477 aa14.55□□□□□ -0.08
PKP4-213ENST00000486254 ATP5J2-PTCD1G3V325 749 aa14.55□□□□□ -0.08
PKP4-213ENST00000486254 CIAO1O76071 339 aa14.55□□□□□ -0.08
PKP4-213ENST00000486254 PCCAP05165 728 aaPredicted RBP14.55□□□□□ -0.08
PKP4-213ENST00000486254 IL6STP40189 918 aaPredicted RBP14.55□□□□□ -0.08
PKP4-213ENST00000486254 GIGYF2Q6Y7W6 1299 aaKnown RBP14.55□□□□□ -0.08
PKP4-213ENST00000486254 EAF2Q96CJ1 260 aaPredicted RBP14.55□□□□□ -0.08
PKP4-213ENST00000486254 SPEF2Q9C093 1822 aa14.55□□□□□ -0.08
PKP4-213ENST00000486254 SLKQ9H2G2 1235 aaPredicted RBP14.54□□□□□ -0.08
PKP4-213ENST00000486254 MYH3P11055 1940 aa14.54□□□□□ -0.08
PKP4-213ENST00000486254 NUP98P52948 1817 aa14.53□□□□□ -0.08
PKP4-213ENST00000486254 RGL2O15211 777 aa14.52□□□□□ -0.08
PKP4-213ENST00000486254 ATP5JP18859 108 aa14.52□□□□□ -0.08
PKP4-213ENST00000486254 HSPA4P34932 840 aa14.52□□□□□ -0.08
PKP4-213ENST00000486254 IL15P40933 162 aaPredicted RBP14.52□□□□□ -0.08
PKP4-213ENST00000486254 LMBR1LQ6UX01 489 aa14.52□□□□□ -0.08
PKP4-213ENST00000486254 ZBTB3Q9H5J0 574 aa14.52□□□□□ -0.08
PKP4-213ENST00000486254 ANO2Q9NQ90 1003 aa14.52□□□□□ -0.08
PKP4-213ENST00000486254 SPATA31A6Q5VVP1 1343 aa14.52□□□□□ -0.09
PKP4-213ENST00000486254 COL5A3P25940 1745 aaPredicted RBP14.52□□□□□ -0.09
PKP4-213ENST00000486254 CD2BP2O95400 341 aaKnown RBP14.51□□□□□ -0.09
PKP4-213ENST00000486254 ADAMTS2O95450 1211 aa14.51□□□□□ -0.09
PKP4-213ENST00000486254 VPS72Q15906 364 aa14.51□□□□□ -0.09
PKP4-213ENST00000486254 TNNI3KQ59H18 835 aa14.51□□□□□ -0.09
PKP4-213ENST00000486254 ZBTB38Q8NAP3 1195 aaPredicted RBP14.51□□□□□ -0.09
PKP4-213ENST00000486254 SLC4A9Q96Q91 983 aa14.51□□□□□ -0.09
PKP4-213ENST00000486254 BCL11AQ9H165 835 aa14.51□□□□□ -0.09
PKP4-213ENST00000486254 FPGT-TNNI3KV9GXZ4 949 aa14.51□□□□□ -0.09
PKP4-213ENST00000486254 BCL9LQ86UU0 1499 aa14.51□□□□□ -0.09
PKP4-213ENST00000486254 CACNB1Q02641 598 aaPredicted RBP14.51□□□□□ -0.09
PKP4-213ENST00000486254 SMARCC1Q92922 1105 aaPredicted RBP14.51□□□□□ -0.09
PKP4-213ENST00000486254 AK7Q96M32 723 aa14.51□□□□□ -0.09
PKP4-213ENST00000486254 RBM42Q9BTD8 480 aaKnown RBP14.51□□□□□ -0.09
PKP4-213ENST00000486254 DIAPH3Q9NSV4 1193 aa14.51□□□□□ -0.09
PKP4-213ENST00000486254 THSD7AQ9UPZ6 1657 aa14.51□□□□□ -0.09
PKP4-213ENST00000486254 KAT6BQ8WYB5 2073 aa14.5□□□□□ -0.09
PKP4-213ENST00000486254 LRP5O75197 1615 aa14.5□□□□□ -0.09
PKP4-213ENST00000486254 ZNF609O15014 1411 aa14.5□□□□□ -0.09
PKP4-213ENST00000486254 PRIM1P49642 420 aaKnown RBP14.5□□□□□ -0.09
PKP4-213ENST00000486254 FNBP4Q8N3X1 1017 aaPredicted RBP14.5□□□□□ -0.09
PKP4-213ENST00000486254 KCNB2Q92953 911 aa14.5□□□□□ -0.09
PKP4-213ENST00000486254 LSG1Q9H089 658 aaKnown RBP14.5□□□□□ -0.09
PKP4-213ENST00000486254 EYA2O00167 538 aa14.49□□□□□ -0.09
PKP4-213ENST00000486254 CSF1RP07333 972 aa14.49□□□□□ -0.09
PKP4-213ENST00000486254 KIAA1211Q6ZU35 1233 aa14.49□□□□□ -0.09
PKP4-213ENST00000486254 ATG9AQ7Z3C6 839 aa14.49□□□□□ -0.09
PKP4-213ENST00000486254 MARCH10Q8NA82 808 aaPredicted RBP14.49□□□□□ -0.09
PKP4-213ENST00000486254 SIL1Q9H173 461 aa14.49□□□□□ -0.09
PKP4-213ENST00000486254 CWC22Q9HCG8 908 aaKnown RBP14.49□□□□□ -0.09
PKP4-213ENST00000486254 CLEC17AQ6ZS10 378 aa14.48□□□□□ -0.09
PKP4-213ENST00000486254 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.48□□□□□ -0.09
PKP4-213ENST00000486254 DBNLQ9UJU6 430 aaKnown RBP14.48□□□□□ -0.09
PKP4-213ENST00000486254 ABCC12Q96J65 1359 aa14.48□□□□□ -0.09
PKP4-213ENST00000486254 MED23Q9ULK4 1368 aa14.48□□□□□ -0.09
PKP4-213ENST00000486254 LAMB2P55268 1798 aa14.48□□□□□ -0.09
PKP4-213ENST00000486254 FRAT2O75474 233 aaPredicted RBP14.47□□□□□ -0.09
PKP4-213ENST00000486254 HSP90AA1P07900 732 aaKnown RBP14.47□□□□□ -0.09
PKP4-213ENST00000486254 EIF5P55010 431 aaKnown RBP14.47□□□□□ -0.09
PKP4-213ENST00000486254 TFCP2Q12800 502 aa14.47□□□□□ -0.09
PKP4-213ENST00000486254 RAB3GAP1Q15042 981 aa14.47□□□□□ -0.09
PKP4-213ENST00000486254 NLRP10Q86W26 655 aa14.47□□□□□ -0.09
PKP4-213ENST00000486254 KLHDC4Q8TBB5 520 aa14.47□□□□□ -0.09
PKP4-213ENST00000486254 ZBTB1Q9Y2K1 713 aa14.47□□□□□ -0.09
PKP4-213ENST00000486254 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.47□□□□□ -0.09
PKP4-213ENST00000486254 BCORQ6W2J9 1755 aa14.47□□□□□ -0.09
PKP4-213ENST00000486254 UBAP1LF5GYI3 381 aa14.47□□□□□ -0.09
PKP4-213ENST00000486254 PTMSP20962 102 aa14.47□□□□□ -0.09
PKP4-213ENST00000486254 HAUS7Q99871 368 aa14.47□□□□□ -0.09
PKP4-213ENST00000486254 CCDC8Q9H0W5 538 aaPredicted RBP14.47□□□□□ -0.09
PKP4-213ENST00000486254 IL25Q9H293 177 aa14.47□□□□□ -0.09
PKP4-213ENST00000486254 CCDC87Q9NVE4 849 aa14.47□□□□□ -0.09
PKP4-213ENST00000486254 TLR7Q9NYK1 1049 aaKnown RBP14.47□□□□□ -0.09
PKP4-213ENST00000486254 PALLDQ8WX93 1383 aa14.47□□□□□ -0.09
PKP4-213ENST00000486254 LOC102724428A0A0B4J2F2 783 aa14.46□□□□□ -0.09
PKP4-213ENST00000486254 SIK1P57059 783 aa14.46□□□□□ -0.09
PKP4-213ENST00000486254 INTS4Q96HW7 963 aaKnown RBP14.46□□□□□ -0.09
PKP4-213ENST00000486254 TM6SF1Q9BZW5 370 aa14.46□□□□□ -0.09
PKP4-213ENST00000486254 NHSQ6T4R5 1651 aa14.46□□□□□ -0.1
PKP4-213ENST00000486254 DDX11L8A8MPP1 907 aa14.45□□□□□ -0.1
PKP4-213ENST00000486254 HSP90B1P14625 803 aaKnown RBP14.45□□□□□ -0.1
PKP4-213ENST00000486254 PIP4K2BP78356 416 aa14.45□□□□□ -0.1
PKP4-213ENST00000486254 CUL4AQ13619 759 aa14.45□□□□□ -0.1
PKP4-213ENST00000486254 CCDC57Q2TAC2 916 aa14.45□□□□□ -0.1
PKP4-213ENST00000486254 CCDC171Q6TFL3 1326 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms