RNA–Protein interactions for RNA: ENST00000486148.1

TNXB-205, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 2,669 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-205ENST00000486148 TPRNQ4KMQ1 711 aa21.02■□□□□ 0.96
TNXB-205ENST00000486148 SMAP1Q8IYB5 467 aaPredicted RBP21.02■□□□□ 0.96
TNXB-205ENST00000486148 KLHDC4Q8TBB5 520 aa21.02■□□□□ 0.96
TNXB-205ENST00000486148 NPHP4O75161 1426 aaPredicted RBP21.02■□□□□ 0.95
TNXB-205ENST00000486148 UQCRHLA0A096LP55 91 aa21.01■□□□□ 0.95
TNXB-205ENST00000486148 UQCRHP07919 91 aa21.01■□□□□ 0.95
TNXB-205ENST00000486148 ZC3H6P61129 1189 aaKnown RBP21.01■□□□□ 0.95
TNXB-205ENST00000486148 ST3GAL1Q11201 340 aa21.01■□□□□ 0.95
TNXB-205ENST00000486148 NMIQ13287 307 aaPredicted RBP21.01■□□□□ 0.95
TNXB-205ENST00000486148 ZNF790Q6PG37 636 aa21.01■□□□□ 0.95
TNXB-205ENST00000486148 RBM8AQ9Y5S9 174 aaKnown RBP21.01■□□□□ 0.95
TNXB-205ENST00000486148 GJB2P29033 226 aa21.01■□□□□ 0.95
TNXB-205ENST00000486148 RIC3Q7Z5B4 369 aa21.01■□□□□ 0.95
TNXB-205ENST00000486148 TM6SF1Q9BZW5 370 aa21.01■□□□□ 0.95
TNXB-205ENST00000486148 CYP46A1Q9Y6A2 500 aa21.01■□□□□ 0.95
TNXB-205ENST00000486148 MYL6BP14649 208 aa21.01■□□□□ 0.95
TNXB-205ENST00000486148 COL9A3Q14050 684 aaPredicted RBP21.01■□□□□ 0.95
TNXB-205ENST00000486148 C5P01031 1676 aa21■□□□□ 0.95
TNXB-205ENST00000486148 TRHP20396 242 aaPredicted RBP21■□□□□ 0.95
TNXB-205ENST00000486148 CREB3L3Q68CJ9 461 aa21■□□□□ 0.95
TNXB-205ENST00000486148 PHF14O94880 888 aa20.99■□□□□ 0.95
TNXB-205ENST00000486148 BOLA2Q9H3K6 86 aa20.99■□□□□ 0.95
TNXB-205ENST00000486148 KDM6AO15550 1401 aaPredicted RBP20.99■□□□□ 0.95
TNXB-205ENST00000486148 LMTK3Q96Q04 1460 aa20.99■□□□□ 0.95
TNXB-205ENST00000486148 NEURL1BA8MQ27 555 aa20.99■□□□□ 0.95
TNXB-205ENST00000486148 ME3Q16798 604 aa20.99■□□□□ 0.95
TNXB-205ENST00000486148 EPHA10Q5JZY3 1008 aa20.99■□□□□ 0.95
TNXB-205ENST00000486148 MAP4K1Q92918 833 aa20.99■□□□□ 0.95
TNXB-205ENST00000486148 PRDM10Q9NQV6 1147 aa20.99■□□□□ 0.95
TNXB-205ENST00000486148 A0A0D9SFI3 127 aa20.98■□□□□ 0.95
TNXB-205ENST00000486148 FIBPO43427 364 aa20.98■□□□□ 0.95
TNXB-205ENST00000486148 LARP1Q6PKG0 1096 aaKnown RBP20.98■□□□□ 0.95
TNXB-205ENST00000486148 XAGE3Q8WTP9 111 aa20.98■□□□□ 0.95
TNXB-205ENST00000486148 SLC52A2Q9HAB3 445 aa20.98■□□□□ 0.95
TNXB-205ENST00000486148 MTMR6Q9Y217 621 aa20.98■□□□□ 0.95
TNXB-205ENST00000486148 ZKSCAN5Q9Y2L8 839 aa20.98■□□□□ 0.95
TNXB-205ENST00000486148 ZKSCAN1P17029 563 aaPredicted RBP20.98■□□□□ 0.95
TNXB-205ENST00000486148 NFATC2IPQ8NCF5 419 aa20.98■□□□□ 0.95
TNXB-205ENST00000486148 ZSCAN31Q96LW9 406 aaPredicted RBP20.98■□□□□ 0.95
TNXB-205ENST00000486148 NPHP3Q7Z494 1330 aa20.97■□□□□ 0.95
TNXB-205ENST00000486148 ZNF500O60304 480 aaPredicted RBP20.97■□□□□ 0.95
TNXB-205ENST00000486148 KCNJ4P48050 445 aa20.97■□□□□ 0.95
TNXB-205ENST00000486148 CCDC183Q5T5S1 534 aa20.97■□□□□ 0.95
TNXB-205ENST00000486148 COPS6Q7L5N1 327 aa20.97■□□□□ 0.95
TNXB-205ENST00000486148 NECAB1Q8N987 351 aa20.97■□□□□ 0.95
TNXB-205ENST00000486148 ZHX1Q9UKY1 873 aaPredicted RBP20.97■□□□□ 0.95
TNXB-205ENST00000486148 UBE2HP62256 183 aa20.97■□□□□ 0.95
TNXB-205ENST00000486148 GCKRQ14397 625 aa20.97■□□□□ 0.95
TNXB-205ENST00000486148 RAPGEF4Q8WZA2 1011 aa20.97■□□□□ 0.95
TNXB-205ENST00000486148 MYD88Q99836 296 aa20.97■□□□□ 0.95
TNXB-205ENST00000486148 SH2B1Q9NRF2 756 aaPredicted RBP20.97■□□□□ 0.95
TNXB-205ENST00000486148 TPCN1Q9ULQ1 816 aa20.97■□□□□ 0.95
TNXB-205ENST00000486148 SLC27A2O14975 620 aa20.96■□□□□ 0.95
TNXB-205ENST00000486148 FSD1Q9BTV5 496 aa20.96■□□□□ 0.95
TNXB-205ENST00000486148 NLRP2Q9NX02 1062 aa20.96■□□□□ 0.95
TNXB-205ENST00000486148 HIP1O00291 1037 aa20.96■□□□□ 0.95
TNXB-205ENST00000486148 DNM1Q05193 864 aaKnown RBP20.96■□□□□ 0.95
TNXB-205ENST00000486148 SNRKQ9NRH2 765 aa20.96■□□□□ 0.95
TNXB-205ENST00000486148 CCDC39Q9UFE4 941 aa20.96■□□□□ 0.95
TNXB-205ENST00000486148 SCN11AQ9UI33 1791 aa20.95■□□□□ 0.94
TNXB-205ENST00000486148 PIP4K2AP48426 406 aaPredicted RBP20.95■□□□□ 0.94
TNXB-205ENST00000486148 NEXNQ0ZGT2 675 aa20.95■□□□□ 0.94
TNXB-205ENST00000486148 JARID2Q92833 1246 aaPredicted RBP20.95■□□□□ 0.94
TNXB-205ENST00000486148 ZNF496Q96IT1 587 aaPredicted RBP20.95■□□□□ 0.94
TNXB-205ENST00000486148 ATP6V1DQ9Y5K8 247 aa20.95■□□□□ 0.94
TNXB-205ENST00000486148 TAF6LQ9Y6J9 622 aa20.95■□□□□ 0.94
TNXB-205ENST00000486148 C1orf167Q5SNV9 1468 aa20.95■□□□□ 0.94
TNXB-205ENST00000486148 PHKG2P15735 406 aa20.95■□□□□ 0.94
TNXB-205ENST00000486148 PROSER2Q86WR7 435 aaPredicted RBP20.94■□□□□ 0.94
TNXB-205ENST00000486148 METTL22Q9BUU2 404 aaPredicted RBP20.94■□□□□ 0.94
TNXB-205ENST00000486148 EDC3Q96F86 508 aaKnown RBP20.94■□□□□ 0.94
TNXB-205ENST00000486148 TCEANC2Q96MN5 208 aa20.93■□□□□ 0.94
TNXB-205ENST00000486148 MRC1P22897 1456 aa20.93■□□□□ 0.94
TNXB-205ENST00000486148 VPS37CA5D8V6 355 aaPredicted RBP20.93■□□□□ 0.94
TNXB-205ENST00000486148 ZNF589Q86UQ0 364 aaPredicted RBP20.93■□□□□ 0.94
TNXB-205ENST00000486148 USP16Q9Y5T5 823 aa20.93■□□□□ 0.94
TNXB-205ENST00000486148 MED23Q9ULK4 1368 aa20.93■□□□□ 0.94
TNXB-205ENST00000486148 MEGF6O75095 1541 aa20.93■□□□□ 0.94
TNXB-205ENST00000486148 LRP10Q7Z4F1 713 aa20.92■□□□□ 0.94
TNXB-205ENST00000486148 DYNC1I1O14576 645 aa20.91■□□□□ 0.94
TNXB-205ENST00000486148 TATP17735 454 aaPredicted RBP20.91■□□□□ 0.94
TNXB-205ENST00000486148 DDX17Q92841 729 aaKnown RBP20.91■□□□□ 0.94
TNXB-205ENST00000486148 ALS2Q96Q42 1657 aa20.91■□□□□ 0.94
TNXB-205ENST00000486148 MCM5P33992 734 aa20.91■□□□□ 0.94
TNXB-205ENST00000486148 ANKRD13DQ6ZTN6 518 aa20.91■□□□□ 0.94
TNXB-205ENST00000486148 FAM184AQ8NB25 1140 aa20.91■□□□□ 0.94
TNXB-205ENST00000486148 HCLS1P14317 486 aaPredicted RBP20.91■□□□□ 0.94
TNXB-205ENST00000486148 PSMA5P28066 241 aa20.91■□□□□ 0.94
TNXB-205ENST00000486148 KIF1AQ12756 1690 aa20.91■□□□□ 0.94
TNXB-205ENST00000486148 MST1RQ04912 1400 aa20.9■□□□□ 0.94
TNXB-205ENST00000486148 RFX5P48382 616 aaPredicted RBP20.9■□□□□ 0.94
TNXB-205ENST00000486148 FGD1P98174 961 aa20.9■□□□□ 0.94
TNXB-205ENST00000486148 BLOC1S2Q6QNY1 142 aa20.9■□□□□ 0.94
TNXB-205ENST00000486148 USP25Q9UHP3 1055 aa20.9■□□□□ 0.94
TNXB-205ENST00000486148 DBNLQ9UJU6 430 aaKnown RBP20.9■□□□□ 0.94
TNXB-205ENST00000486148 LETM1O95202 739 aaPredicted RBP20.89■□□□□ 0.93
TNXB-205ENST00000486148 PTMAP06454 111 aaKnown RBP20.89■□□□□ 0.93
TNXB-205ENST00000486148 UVSSAQ2YD98 709 aa20.89■□□□□ 0.93
TNXB-205ENST00000486148 MTERF4Q7Z6M4 381 aaKnown RBP20.89■□□□□ 0.93
TNXB-205ENST00000486148 COPRSQ9NQ92 184 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms