RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 HIRAP54198 1017 aaPredicted RBP13.33□□□□□ -0.28
SND1-213ENST00000486037 GPRC5DQ9NZD1 345 aa13.33□□□□□ -0.28
SND1-213ENST00000486037 ABCC12Q96J65 1359 aa13.32□□□□□ -0.28
SND1-213ENST00000486037 PRAMEF22A3QJZ6 481 aa13.32□□□□□ -0.28
SND1-213ENST00000486037 NOGQ13253 232 aa13.32□□□□□ -0.28
SND1-213ENST00000486037 ZNF790Q6PG37 636 aa13.32□□□□□ -0.28
SND1-213ENST00000486037 LARGE2Q8N3Y3 721 aa13.32□□□□□ -0.28
SND1-213ENST00000486037 ADARB2Q9NS39 739 aaKnown RBP13.32□□□□□ -0.28
SND1-213ENST00000486037 BRCA2P51587 3418 aa13.32□□□□□ -0.28
SND1-213ENST00000486037 SZT2Q5T011 3432 aa13.32□□□□□ -0.28
SND1-213ENST00000486037 SIPA1L3O60292 1781 aaPredicted RBP13.31□□□□□ -0.28
SND1-213ENST00000486037 SHTN1A0MZ66 631 aa13.31□□□□□ -0.28
SND1-213ENST00000486037 HABP4Q5JVS0 413 aaKnown RBP13.31□□□□□ -0.28
SND1-213ENST00000486037 TRPM4Q8TD43 1214 aa13.31□□□□□ -0.28
SND1-213ENST00000486037 POLR3GLQ9BT43 218 aa13.31□□□□□ -0.28
SND1-213ENST00000486037 PGAP2Q9UHJ9 254 aa13.31□□□□□ -0.28
SND1-213ENST00000486037 HTTP42858 3142 aa13.3□□□□□ -0.28
SND1-213ENST00000486037 TRPA1O75762 1119 aa13.3□□□□□ -0.28
SND1-213ENST00000486037 ALDH1B1P30837 517 aa13.3□□□□□ -0.28
SND1-213ENST00000486037 HUNKP57058 714 aa13.3□□□□□ -0.28
SND1-213ENST00000486037 IL17REQ8NFR9 667 aa13.3□□□□□ -0.28
SND1-213ENST00000486037 RNF186Q9NXI6 227 aa13.3□□□□□ -0.28
SND1-213ENST00000486037 HPS5Q9UPZ3 1129 aa13.3□□□□□ -0.28
SND1-213ENST00000486037 NIP7Q9Y221 180 aaKnown RBP eCLIP13.3□□□□□ -0.28
SND1-213ENST00000486037 USP16Q9Y5T5 823 aa13.3□□□□□ -0.28
SND1-213ENST00000486037 CENPFP49454 3210 aa13.3□□□□□ -0.28
SND1-213ENST00000486037 TCERG1O14776 1098 aaKnown RBP13.29□□□□□ -0.28
SND1-213ENST00000486037 GMPSP49915 693 aaPredicted RBP13.29□□□□□ -0.28
SND1-213ENST00000486037 KIF23Q02241 960 aaPredicted RBP13.29□□□□□ -0.28
SND1-213ENST00000486037 CLEC4GQ6UXB4 293 aa13.29□□□□□ -0.28
SND1-213ENST00000486037 TEX13AQ9BXU3 409 aaPredicted RBP13.29□□□□□ -0.28
SND1-213ENST00000486037 SAGE1Q9NXZ1 904 aa13.29□□□□□ -0.28
SND1-213ENST00000486037 NPC1L1Q9UHC9 1359 aa13.29□□□□□ -0.28
SND1-213ENST00000486037 HSPA5P11021 654 aaKnown RBP13.28□□□□□ -0.28
SND1-213ENST00000486037 CXCL9Q07325 125 aa13.28□□□□□ -0.28
SND1-213ENST00000486037 HLFQ16534 295 aa13.28□□□□□ -0.28
SND1-213ENST00000486037 AOC3Q16853 763 aa13.28□□□□□ -0.28
SND1-213ENST00000486037 CRY2Q49AN0 593 aa13.28□□□□□ -0.28
SND1-213ENST00000486037 TPTE2Q6XPS3 522 aa13.28□□□□□ -0.28
SND1-213ENST00000486037 CTU1Q7Z7A3 348 aaKnown RBP13.28□□□□□ -0.28
SND1-213ENST00000486037 MORC1Q86VD1 984 aa13.28□□□□□ -0.28
SND1-213ENST00000486037 NUTM1Q86Y26 1132 aa13.28□□□□□ -0.28
SND1-213ENST00000486037 NIM1KQ8IY84 436 aa13.28□□□□□ -0.28
SND1-213ENST00000486037 USP48Q86UV5 1035 aa13.27□□□□□ -0.29
SND1-213ENST00000486037 FMNL2Q96PY5 1086 aa13.27□□□□□ -0.29
SND1-213ENST00000486037 PANK3Q9H999 370 aa13.27□□□□□ -0.29
SND1-213ENST00000486037 NBPF26B4DH59 902 aa13.26□□□□□ -0.29
SND1-213ENST00000486037 PPIP5K2O43314 1243 aa13.26□□□□□ -0.29
SND1-213ENST00000486037 EIF4G2P78344 907 aaKnown RBP eCLIP13.26□□□□□ -0.293e-7■■■■□ 26.1
SND1-213ENST00000486037 RGMBQ6NW40 437 aa13.26□□□□□ -0.29
SND1-213ENST00000486037 NBPF10Q6P3W6 841 aaKnown RBP13.26□□□□□ -0.29
SND1-213ENST00000486037 NPM2Q86SE8 214 aaKnown RBP13.26□□□□□ -0.29
SND1-213ENST00000486037 NBPF15Q8N660 670 aa13.26□□□□□ -0.29
SND1-213ENST00000486037 C3orf67Q6ZVT6 689 aa13.25□□□□□ -0.29
SND1-213ENST00000486037 CDC37L1Q7L3B6 337 aa13.25□□□□□ -0.29
SND1-213ENST00000486037 CSRNP1Q96S65 589 aa13.25□□□□□ -0.29
SND1-213ENST00000486037 AKAP11Q9UKA4 1901 aa13.25□□□□□ -0.29
SND1-213ENST00000486037 FXR1P51114 621 aaKnown RBP eCLIP13.24□□□□□ -0.298e-8■□□□□ 11
SND1-213ENST00000486037 TEFQ10587 303 aa13.24□□□□□ -0.29
SND1-213ENST00000486037 CC2D2BQ6DHV5 1058 aa13.24□□□□□ -0.29
SND1-213ENST00000486037 GCC1Q96CN9 775 aa13.24□□□□□ -0.29
SND1-213ENST00000486037 ZNF652Q9Y2D9 606 aa13.24□□□□□ -0.29
SND1-213ENST00000486037 RIC1Q4ADV7 1423 aa13.23□□□□□ -0.29
SND1-213ENST00000486037 PPEF1O14829 653 aaPredicted RBP13.23□□□□□ -0.29
SND1-213ENST00000486037 RAD17O75943 681 aa13.23□□□□□ -0.29
SND1-213ENST00000486037 EGFRP00533 1210 aa13.23□□□□□ -0.29
SND1-213ENST00000486037 HOXA10P31260 410 aaPredicted RBP13.23□□□□□ -0.29
SND1-213ENST00000486037 ZC3H15Q8WU90 426 aaKnown RBP13.23□□□□□ -0.29
SND1-213ENST00000486037 POLR2AP24928 1970 aaKnown RBP13.22□□□□□ -0.29
SND1-213ENST00000486037 ADM5C9JUS6 153 aa13.22□□□□□ -0.29
SND1-213ENST00000486037 SLC10A3P09131 477 aa13.22□□□□□ -0.29
SND1-213ENST00000486037 GTF2E1P29083 439 aaPredicted RBP13.22□□□□□ -0.29
SND1-213ENST00000486037 ZNF157P51786 506 aaPredicted RBP13.22□□□□□ -0.29
SND1-213ENST00000486037 GBA2Q9HCG7 927 aaPredicted RBP13.22□□□□□ -0.29
SND1-213ENST00000486037 ZNRF3Q9ULT6 936 aa13.22□□□□□ -0.29
SND1-213ENST00000486037 CEMIPQ8WUJ3 1361 aa13.21□□□□□ -0.29
SND1-213ENST00000486037 YDJCA8MPS7 323 aa13.21□□□□□ -0.29
SND1-213ENST00000486037 SAMD7Q7Z3H4 446 aa13.21□□□□□ -0.29
SND1-213ENST00000486037 RPGRQ92834 1020 aaKnown RBP13.21□□□□□ -0.29
SND1-213ENST00000486037 CNOT7Q9UIV1 285 aaKnown RBP13.21□□□□□ -0.29
SND1-213ENST00000486037 KIF7Q2M1P5 1343 aa13.2□□□□□ -0.3
SND1-213ENST00000486037 UBN2Q6ZU65 1347 aa13.2□□□□□ -0.3
SND1-213ENST00000486037 BTBD11A6QL63 1104 aa13.2□□□□□ -0.3
SND1-213ENST00000486037 GNAT3A8MTJ3 354 aa13.2□□□□□ -0.3
SND1-213ENST00000486037 MICALL2Q8IY33 904 aa13.2□□□□□ -0.3
SND1-213ENST00000486037 ZNF296Q8WUU4 475 aaPredicted RBP13.2□□□□□ -0.3
SND1-213ENST00000486037 CCDC102AQ96A19 550 aa13.2□□□□□ -0.3
SND1-213ENST00000486037 BCL2L13Q9BXK5 485 aa13.2□□□□□ -0.3
SND1-213ENST00000486037 ZBTB12Q9Y330 459 aaPredicted RBP13.2□□□□□ -0.3
SND1-213ENST00000486037 A0A0C4DFX4 3053 aa13.19□□□□□ -0.3
SND1-213ENST00000486037 KRT26Q7Z3Y9 468 aa13.19□□□□□ -0.3
SND1-213ENST00000486037 CRAMP1Q96RY5 1269 aa13.19□□□□□ -0.3
SND1-213ENST00000486037 CDHR2Q9BYE9 1310 aa13.18□□□□□ -0.3
SND1-213ENST00000486037 TBC1D8O95759 1140 aa13.18□□□□□ -0.3
SND1-213ENST00000486037 TBC1D10BQ4KMP7 808 aaPredicted RBP13.18□□□□□ -0.3
SND1-213ENST00000486037 GRIPAP1Q4V328 841 aa13.18□□□□□ -0.3
SND1-213ENST00000486037 SUSD4Q5VX71 490 aa13.18□□□□□ -0.3
SND1-213ENST00000486037 RASAL3Q86YV0 1011 aa13.18□□□□□ -0.3
SND1-213ENST00000486037 C2orf69Q8N8R5 385 aa13.18□□□□□ -0.3
SND1-213ENST00000486037 RBM17Q96I25 401 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms