RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 PSDA5PKW4 1024 aaPredicted RBP22.17■■□□□ 1.14
CHMP3-207ENST00000485465 SUSD4Q5VX71 490 aa22.17■■□□□ 1.14
CHMP3-207ENST00000485465 DDX19BQ9UMR2 479 aa22.17■■□□□ 1.14
CHMP3-207ENST00000485465 ZBTB7BO15156 539 aaPredicted RBP22.16■■□□□ 1.14
CHMP3-207ENST00000485465 MSL1Q68DK7 614 aa22.16■■□□□ 1.14
CHMP3-207ENST00000485465 USP44Q9H0E7 712 aa22.16■■□□□ 1.14
CHMP3-207ENST00000485465 GRM8O00222 908 aa22.15■■□□□ 1.14
CHMP3-207ENST00000485465 PPP1R42Q7Z4L9 355 aa22.15■■□□□ 1.14
CHMP3-207ENST00000485465 UTP14AQ9BVJ6 771 aaKnown RBP22.15■■□□□ 1.14
CHMP3-207ENST00000485465 C9orf78Q9NZ63 289 aaPredicted RBP22.15■■□□□ 1.14
CHMP3-207ENST00000485465 AFDNP55196 1824 aaKnown RBP22.15■■□□□ 1.14
CHMP3-207ENST00000485465 CASZ1Q86V15 1759 aa22.15■■□□□ 1.14
CHMP3-207ENST00000485465 CARMIL3Q8ND23 1372 aa22.14■■□□□ 1.14
CHMP3-207ENST00000485465 FAM177BA6PVY3 158 aa22.14■■□□□ 1.13
CHMP3-207ENST00000485465 H7C1W4 665 aa22.14■■□□□ 1.13
CHMP3-207ENST00000485465 NEFLP07196 543 aa22.14■■□□□ 1.13
CHMP3-207ENST00000485465 MEIS3Q99687 375 aa22.14■■□□□ 1.13
CHMP3-207ENST00000485465 TRMT112Q9UI30 125 aaKnown RBP22.14■■□□□ 1.13
CHMP3-207ENST00000485465 UTYO14607 1347 aa22.13■■□□□ 1.13
CHMP3-207ENST00000485465 NTSR2O95665 410 aa22.13■■□□□ 1.13
CHMP3-207ENST00000485465 PCCAP05165 728 aaPredicted RBP22.13■■□□□ 1.13
CHMP3-207ENST00000485465 DDR1Q08345 913 aa22.13■■□□□ 1.13
CHMP3-207ENST00000485465 ZBTB38Q8NAP3 1195 aaPredicted RBP22.13■■□□□ 1.13
CHMP3-207ENST00000485465 EXOC6Q8TAG9 804 aa22.13■■□□□ 1.13
CHMP3-207ENST00000485465 CHMP4BQ9H444 224 aaKnown RBP22.13■■□□□ 1.13
CHMP3-207ENST00000485465 POLRMTO00411 1230 aaKnown RBP22.12■■□□□ 1.13
CHMP3-207ENST00000485465 GNAI3P08754 354 aa22.12■■□□□ 1.13
CHMP3-207ENST00000485465 MMP10P09238 476 aa22.12■■□□□ 1.13
CHMP3-207ENST00000485465 NBPF7P0C2Y1 421 aaPredicted RBP22.12■■□□□ 1.13
CHMP3-207ENST00000485465 NBPF5PQ86XG9 351 aaPredicted RBP22.12■■□□□ 1.13
CHMP3-207ENST00000485465 JARID2Q92833 1246 aaPredicted RBP22.12■■□□□ 1.13
CHMP3-207ENST00000485465 NYXQ9GZU5 481 aa22.12■■□□□ 1.13
CHMP3-207ENST00000485465 COL24A1Q17RW2 1714 aa22.11■■□□□ 1.13
CHMP3-207ENST00000485465 ZBTB7AO95365 584 aa22.11■■□□□ 1.13
CHMP3-207ENST00000485465 SERPINB2P05120 415 aa22.11■■□□□ 1.13
CHMP3-207ENST00000485465 CASP7P55210 303 aa22.11■■□□□ 1.13
CHMP3-207ENST00000485465 TPTE2Q6XPS3 522 aa22.11■■□□□ 1.13
CHMP3-207ENST00000485465 UBE3BQ7Z3V4 1068 aa22.11■■□□□ 1.13
CHMP3-207ENST00000485465 FAM89AQ96GI7 184 aa22.11■■□□□ 1.13
CHMP3-207ENST00000485465 MTFR1LQ9H019 292 aa22.11■■□□□ 1.13
CHMP3-207ENST00000485465 UBTFL1P0CB47 393 aaPredicted RBP22.1■■□□□ 1.13
CHMP3-207ENST00000485465 RTL5Q5HYW3 569 aaPredicted RBP22.1■■□□□ 1.13
CHMP3-207ENST00000485465 ZBTB40Q9NUA8 1239 aa22.1■■□□□ 1.13
CHMP3-207ENST00000485465 PARP3Q9Y6F1 533 aa22.1■■□□□ 1.13
CHMP3-207ENST00000485465 SH3TC1Q8TE82 1336 aa22.09■■□□□ 1.13
CHMP3-207ENST00000485465 SYNE4Q8N205 404 aa22.09■■□□□ 1.13
CHMP3-207ENST00000485465 CDHR2Q9BYE9 1310 aa22.08■■□□□ 1.13
CHMP3-207ENST00000485465 NUTM1Q86Y26 1132 aa22.08■■□□□ 1.13
CHMP3-207ENST00000485465 HDAC5Q9UQL6 1122 aa22.08■■□□□ 1.13
CHMP3-207ENST00000485465 GNAI2P04899 355 aa22.07■■□□□ 1.12
CHMP3-207ENST00000485465 GTF2E1P29083 439 aaPredicted RBP22.07■■□□□ 1.12
CHMP3-207ENST00000485465 ERFEQ4G0M1 354 aa22.07■■□□□ 1.12
CHMP3-207ENST00000485465 CNBD1Q8NA66 436 aa22.07■■□□□ 1.12
CHMP3-207ENST00000485465 SUCLG2Q96I99 432 aa22.07■■□□□ 1.12
CHMP3-207ENST00000485465 ATF5Q9Y2D1 282 aaPredicted RBP22.07■■□□□ 1.12
CHMP3-207ENST00000485465 IRS4O14654 1257 aaPredicted RBP22.06■■□□□ 1.12
CHMP3-207ENST00000485465 NPHP1O15259 732 aa22.06■■□□□ 1.12
CHMP3-207ENST00000485465 AAMPQ13685 434 aa22.06■■□□□ 1.12
CHMP3-207ENST00000485465 PRR5LQ6MZQ0 368 aa22.06■■□□□ 1.12
CHMP3-207ENST00000485465 SLC10A5Q5PT55 438 aa22.05■■□□□ 1.12
CHMP3-207ENST00000485465 KAZALD1Q96I82 304 aa22.05■■□□□ 1.12
CHMP3-207ENST00000485465 LRRFIP2Q9Y608 721 aaKnown RBP22.05■■□□□ 1.12
CHMP3-207ENST00000485465 HSP90B1P14625 803 aaKnown RBP22.04■■□□□ 1.12
CHMP3-207ENST00000485465 ST5P78524 1137 aa22.04■■□□□ 1.12
CHMP3-207ENST00000485465 PLA2G12BQ9BX93 195 aa22.04■■□□□ 1.12
CHMP3-207ENST00000485465 C1orf115Q9H7X2 142 aa22.04■■□□□ 1.12
CHMP3-207ENST00000485465 ABCC12Q96J65 1359 aa22.03■■□□□ 1.12
CHMP3-207ENST00000485465 HCLS1P14317 486 aaPredicted RBP22.03■■□□□ 1.12
CHMP3-207ENST00000485465 POLD1P28340 1107 aa22.03■■□□□ 1.12
CHMP3-207ENST00000485465 CCDC24Q8N4L8 307 aa22.03■■□□□ 1.12
CHMP3-207ENST00000485465 NRXN2Q9P2S2 1712 aa22.03■■□□□ 1.12
CHMP3-207ENST00000485465 PDE8AO60658 829 aa22.02■■□□□ 1.12
CHMP3-207ENST00000485465 FOXO4P98177 505 aa22.02■■□□□ 1.12
CHMP3-207ENST00000485465 EPHA10Q5JZY3 1008 aa22.02■■□□□ 1.12
CHMP3-207ENST00000485465 BICC1Q9H694 974 aaKnown RBP22.02■■□□□ 1.12
CHMP3-207ENST00000485465 SGIP1Q9BQI5 828 aa22.01■■□□□ 1.11
CHMP3-207ENST00000485465 ERICH6BQ5W0A0 696 aa22■■□□□ 1.11
CHMP3-207ENST00000485465 ANKRD44Q8N8A2 993 aa22■■□□□ 1.11
CHMP3-207ENST00000485465 RIC1Q4ADV7 1423 aa21.99■■□□□ 1.11
CHMP3-207ENST00000485465 PTGER2P43116 358 aa21.99■■□□□ 1.11
CHMP3-207ENST00000485465 CTSWP56202 376 aa21.99■■□□□ 1.11
CHMP3-207ENST00000485465 RABL6Q3YEC7 729 aaPredicted RBP21.99■■□□□ 1.11
CHMP3-207ENST00000485465 NLRP3Q96P20 1036 aa21.99■■□□□ 1.11
CHMP3-207ENST00000485465 SPON1Q9HCB6 807 aa21.99■■□□□ 1.11
CHMP3-207ENST00000485465 DDX60Q8IY21 1712 aaKnown RBP21.98■■□□□ 1.11
CHMP3-207ENST00000485465 CSF1RP07333 972 aa21.98■■□□□ 1.11
CHMP3-207ENST00000485465 LMBR1LQ6UX01 489 aa21.98■■□□□ 1.11
CHMP3-207ENST00000485465 C3orf67Q6ZVT6 689 aa21.98■■□□□ 1.11
CHMP3-207ENST00000485465 BRIP1Q9BX63 1249 aa21.98■■□□□ 1.11
CHMP3-207ENST00000485465 PCDHB15Q9Y5E8 787 aa21.98■■□□□ 1.11
CHMP3-207ENST00000485465 LAMB2P55268 1798 aa21.97■■□□□ 1.11
CHMP3-207ENST00000485465 CEP85Q6P2H3 762 aa21.97■■□□□ 1.11
CHMP3-207ENST00000485465 RPAP2Q8IXW5 612 aaPredicted RBP21.97■■□□□ 1.11
CHMP3-207ENST00000485465 TTLL11Q8NHH1 800 aa21.97■■□□□ 1.11
CHMP3-207ENST00000485465 ATP8B2P98198 1209 aa21.96■■□□□ 1.11
CHMP3-207ENST00000485465 MTX1Q13505 466 aa21.96■■□□□ 1.11
CHMP3-207ENST00000485465 SF3B3Q15393 1217 aaKnown RBP21.96■■□□□ 1.11
CHMP3-207ENST00000485465 KLRG2A4D1S0 409 aaPredicted RBP21.95■■□□□ 1.1
CHMP3-207ENST00000485465 PDE6BP35913 854 aa21.94■■□□□ 1.1
CHMP3-207ENST00000485465 CCDC152Q4G0S7 254 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms