RNA–Protein interactions for RNA: ENST00000485192.1

TNFAIP3-205, Transcript of TNF alpha induced protein 3, humanhuman

TSL 2

Gene TNFAIP3, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-205ENST00000485192 VARS2Q5ST30 1063 aaKnown RBP8.12□□□□□ -1.11
TNFAIP3-205ENST00000485192 KIAA1524Q8TCG1 905 aa8.12□□□□□ -1.11
TNFAIP3-205ENST00000485192 C1orf115Q9H7X2 142 aa8.12□□□□□ -1.11
TNFAIP3-205ENST00000485192 NPDC1Q9NQX5 325 aaPredicted RBP8.12□□□□□ -1.11
TNFAIP3-205ENST00000485192 SH2B1Q9NRF2 756 aaPredicted RBP8.12□□□□□ -1.11
TNFAIP3-205ENST00000485192 STAP2Q9UGK3 403 aa8.12□□□□□ -1.11
TNFAIP3-205ENST00000485192 RIMS1Q86UR5 1692 aaKnown RBP8.11□□□□□ -1.11
TNFAIP3-205ENST00000485192 ELP1O95163 1332 aa8.11□□□□□ -1.11
TNFAIP3-205ENST00000485192 ZSCAN22P10073 491 aaPredicted RBP8.11□□□□□ -1.11
TNFAIP3-205ENST00000485192 PDCP20941 246 aa8.11□□□□□ -1.11
TNFAIP3-205ENST00000485192 PBX2P40425 430 aa8.11□□□□□ -1.11
TNFAIP3-205ENST00000485192 PKP1Q13835 747 aa8.11□□□□□ -1.11
TNFAIP3-205ENST00000485192 RNF214Q8ND24 703 aa8.11□□□□□ -1.11
TNFAIP3-205ENST00000485192 FAM200AQ8TCP9 573 aa8.11□□□□□ -1.11
TNFAIP3-205ENST00000485192 LRRCC1Q9C099 1032 aa8.11□□□□□ -1.11
TNFAIP3-205ENST00000485192 SLC24A3Q9HC58 644 aa8.11□□□□□ -1.11
TNFAIP3-205ENST00000485192 CPS1P31327 1500 aa8.11□□□□□ -1.11
TNFAIP3-205ENST00000485192 SALL3Q9BXA9 1300 aa8.1□□□□□ -1.11
TNFAIP3-205ENST00000485192 PPP1R3GB7ZBB8 358 aa8.1□□□□□ -1.11
TNFAIP3-205ENST00000485192 IRF6O14896 467 aa8.1□□□□□ -1.11
TNFAIP3-205ENST00000485192 RAB11FIP3O75154 756 aa8.1□□□□□ -1.11
TNFAIP3-205ENST00000485192 GNAI2P04899 355 aa8.1□□□□□ -1.11
TNFAIP3-205ENST00000485192 CDC25BP30305 580 aa8.1□□□□□ -1.11
TNFAIP3-205ENST00000485192 IL13P35225 146 aa8.1□□□□□ -1.11
TNFAIP3-205ENST00000485192 SLFNL1Q499Z3 407 aa8.1□□□□□ -1.11
TNFAIP3-205ENST00000485192 TMEM132EQ6IEE7 984 aa8.1□□□□□ -1.11
TNFAIP3-205ENST00000485192 USP48Q86UV5 1035 aa8.1□□□□□ -1.11
TNFAIP3-205ENST00000485192 RTF1Q92541 710 aaKnown RBP8.1□□□□□ -1.11
TNFAIP3-205ENST00000485192 POLKQ9UBT6 870 aa8.1□□□□□ -1.11
TNFAIP3-205ENST00000485192 CEP170BQ9Y4F5 1589 aaPredicted RBP8.1□□□□□ -1.11
TNFAIP3-205ENST00000485192 TTC21BQ7Z4L5 1316 aa8.09□□□□□ -1.11
TNFAIP3-205ENST00000485192 RAD50Q92878 1312 aa8.09□□□□□ -1.11
TNFAIP3-205ENST00000485192 ARHGAP33O14559 1287 aa8.09□□□□□ -1.11
TNFAIP3-205ENST00000485192 F13A1P00488 732 aa8.09□□□□□ -1.11
TNFAIP3-205ENST00000485192 HSPA4P34932 840 aa8.09□□□□□ -1.11
TNFAIP3-205ENST00000485192 PRSS12P56730 875 aa8.09□□□□□ -1.11
TNFAIP3-205ENST00000485192 HSP90AB4PQ58FF6 505 aa8.09□□□□□ -1.11
TNFAIP3-205ENST00000485192 ZNF687Q8N1G0 1237 aa8.09□□□□□ -1.11
TNFAIP3-205ENST00000485192 RUFY2Q8WXA3 655 aa8.09□□□□□ -1.11
TNFAIP3-205ENST00000485192 CDHR5Q9HBB8 845 aa8.09□□□□□ -1.11
TNFAIP3-205ENST00000485192 DDX19AQ9NUU7 478 aaKnown RBP8.09□□□□□ -1.11
TNFAIP3-205ENST00000485192 BABAM1Q9NWV8 329 aa8.09□□□□□ -1.11
TNFAIP3-205ENST00000485192 USP54Q70EL1 1684 aa8.08□□□□□ -1.12
TNFAIP3-205ENST00000485192 A2ML1A8K2U0 1454 aa8.08□□□□□ -1.12
TNFAIP3-205ENST00000485192 CHL1O00533 1208 aa8.08□□□□□ -1.12
TNFAIP3-205ENST00000485192 STX6O43752 255 aa8.08□□□□□ -1.12
TNFAIP3-205ENST00000485192 ONECUT3O60422 494 aaPredicted RBP8.08□□□□□ -1.12
TNFAIP3-205ENST00000485192 CHMLP26374 656 aa8.08□□□□□ -1.12
TNFAIP3-205ENST00000485192 SLC20A2Q08357 652 aa8.08□□□□□ -1.12
TNFAIP3-205ENST00000485192 MAP3K11Q16584 847 aa8.08□□□□□ -1.12
TNFAIP3-205ENST00000485192 FUCA2Q9BTY2 467 aa8.08□□□□□ -1.12
TNFAIP3-205ENST00000485192 TM6SF1Q9BZW5 370 aa8.08□□□□□ -1.12
TNFAIP3-205ENST00000485192 ANO2Q9NQ90 1003 aa8.08□□□□□ -1.12
TNFAIP3-205ENST00000485192 LIMCH1Q9UPQ0 1083 aa8.08□□□□□ -1.12
TNFAIP3-205ENST00000485192 SMC3Q9UQE7 1217 aa8.08□□□□□ -1.12
TNFAIP3-205ENST00000485192 HDAC5Q9UQL6 1122 aa8.08□□□□□ -1.12
TNFAIP3-205ENST00000485192 TECPR2O15040 1411 aa8.08□□□□□ -1.12
TNFAIP3-205ENST00000485192 DIP2AQ14689 1571 aa8.08□□□□□ -1.12
TNFAIP3-205ENST00000485192 NRDCO43847 1150 aa8.07□□□□□ -1.12
TNFAIP3-205ENST00000485192 OATP04181 439 aa8.07□□□□□ -1.12
TNFAIP3-205ENST00000485192 HCLS1P14317 486 aaPredicted RBP8.07□□□□□ -1.12
TNFAIP3-205ENST00000485192 KRT85P78386 507 aa8.07□□□□□ -1.12
TNFAIP3-205ENST00000485192 KRT222Q8N1A0 295 aa8.07□□□□□ -1.12
TNFAIP3-205ENST00000485192 TSPYL6Q8N831 410 aa8.07□□□□□ -1.12
TNFAIP3-205ENST00000485192 C8orf58Q8NAV2 365 aa8.07□□□□□ -1.12
TNFAIP3-205ENST00000485192 CCDC112Q8NEF3 446 aa8.07□□□□□ -1.12
TNFAIP3-205ENST00000485192 ZNF397Q8NF99 534 aaPredicted RBP8.07□□□□□ -1.12
TNFAIP3-205ENST00000485192 SIRT1Q96EB6 747 aa8.07□□□□□ -1.12
TNFAIP3-205ENST00000485192 COG3Q96JB2 828 aa8.07□□□□□ -1.12
TNFAIP3-205ENST00000485192 PRAM1Q96QH2 718 aa8.07□□□□□ -1.12
TNFAIP3-205ENST00000485192 KCNK17Q96T54 332 aa8.07□□□□□ -1.12
TNFAIP3-205ENST00000485192 CDK19Q9BWU1 502 aa8.07□□□□□ -1.12
TNFAIP3-205ENST00000485192 STK31Q9BXU1 1019 aa8.07□□□□□ -1.12
TNFAIP3-205ENST00000485192 SCAND2PQ9GZW5 306 aaPredicted RBP8.07□□□□□ -1.12
TNFAIP3-205ENST00000485192 CALCOCO1Q9P1Z2 691 aa8.07□□□□□ -1.12
TNFAIP3-205ENST00000485192 MAP3K5Q99683 1374 aa8.07□□□□□ -1.12
TNFAIP3-205ENST00000485192 NPHP3Q7Z494 1330 aa8.06□□□□□ -1.12
TNFAIP3-205ENST00000485192 HIP1O00291 1037 aa8.06□□□□□ -1.12
TNFAIP3-205ENST00000485192 CTAGE5O15320 804 aa8.06□□□□□ -1.12
TNFAIP3-205ENST00000485192 CDK11BP21127 795 aaKnown RBP8.06□□□□□ -1.12
TNFAIP3-205ENST00000485192 CBX1P83916 185 aa8.06□□□□□ -1.12
TNFAIP3-205ENST00000485192 ANKRD1Q15327 319 aa8.06□□□□□ -1.12
TNFAIP3-205ENST00000485192 ZNF771Q7L3S4 317 aaPredicted RBP8.06□□□□□ -1.12
TNFAIP3-205ENST00000485192 PACS2Q86VP3 889 aa8.06□□□□□ -1.12
TNFAIP3-205ENST00000485192 CNTROBQ8N137 903 aa8.06□□□□□ -1.12
TNFAIP3-205ENST00000485192 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.06□□□□□ -1.12
TNFAIP3-205ENST00000485192 CHMP4CQ96CF2 233 aa8.06□□□□□ -1.12
TNFAIP3-205ENST00000485192 GPATCH3Q96I76 525 aa8.06□□□□□ -1.12
TNFAIP3-205ENST00000485192 NUP62CLQ9H1M0 184 aa8.06□□□□□ -1.12
TNFAIP3-205ENST00000485192 KCND1Q9NSA2 647 aa8.06□□□□□ -1.12
TNFAIP3-205ENST00000485192 ZHX1Q9UKY1 873 aaPredicted RBP8.06□□□□□ -1.12
TNFAIP3-205ENST00000485192 NSFL1CQ9UNZ2 370 aaKnown RBP8.06□□□□□ -1.12
TNFAIP3-205ENST00000485192 MORC2Q9Y6X9 1032 aaPredicted RBP8.06□□□□□ -1.12
TNFAIP3-205ENST00000485192 AGLP35573 1532 aa8.06□□□□□ -1.12
TNFAIP3-205ENST00000485192 TTC41PQ6P2S7 1318 aa8.05□□□□□ -1.12
TNFAIP3-205ENST00000485192 USP42Q9H9J4 1324 aaKnown RBP8.05□□□□□ -1.12
TNFAIP3-205ENST00000485192 CRB1P82279 1406 aa8.05□□□□□ -1.12
TNFAIP3-205ENST00000485192 TSPOAP1O95153 1857 aa8.05□□□□□ -1.12
TNFAIP3-205ENST00000485192 CCP110O43303 1012 aa8.05□□□□□ -1.12
TNFAIP3-205ENST00000485192 VPS53Q5VIR6 699 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms