RNA–Protein interactions for RNA: ENST00000484746.1

ATP2B4-207, Transcript of ATPase plasma membrane Ca2+ transporting 4, humanhuman

TSL 1 (best)

Gene ATP2B4, Length 4,697 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4-207ENST00000484746 CDK11BP21127 795 aaKnown RBP6.71□□□□□ -1.34
ATP2B4-207ENST00000484746 PRPF40BQ6NWY9 871 aaKnown RBP6.71□□□□□ -1.34
ATP2B4-207ENST00000484746 PRDM4Q9UKN5 801 aa6.71□□□□□ -1.34
ATP2B4-207ENST00000484746 CPS1P31327 1500 aa6.71□□□□□ -1.34
ATP2B4-207ENST00000484746 ZNF335Q9H4Z2 1342 aaPredicted RBP6.71□□□□□ -1.34
ATP2B4-207ENST00000484746 RIMS1Q86UR5 1692 aaKnown RBP6.71□□□□□ -1.34
ATP2B4-207ENST00000484746 TPM4P67936 248 aa6.71□□□□□ -1.34
ATP2B4-207ENST00000484746 CAVIN1Q6NZI2 390 aaKnown RBP6.71□□□□□ -1.34
ATP2B4-207ENST00000484746 BRINP3Q76B58 766 aa6.71□□□□□ -1.34
ATP2B4-207ENST00000484746 ESYT1Q9BSJ8 1104 aa6.71□□□□□ -1.34
ATP2B4-207ENST00000484746 PA2G4Q9UQ80 394 aaKnown RBP6.71□□□□□ -1.34
ATP2B4-207ENST00000484746 WDR17Q8IZU2 1322 aa6.71□□□□□ -1.34
ATP2B4-207ENST00000484746 SETD1BQ9UPS6 1966 aaKnown RBP6.7□□□□□ -1.34
ATP2B4-207ENST00000484746 IDH1O75874 414 aaKnown RBP6.7□□□□□ -1.34
ATP2B4-207ENST00000484746 CASTP20810 708 aaKnown RBP6.7□□□□□ -1.34
ATP2B4-207ENST00000484746 SSFA2P28290 1259 aa6.7□□□□□ -1.34
ATP2B4-207ENST00000484746 ZSCAN30Q86W11 494 aa6.7□□□□□ -1.34
ATP2B4-207ENST00000484746 FBXW7Q969H0 707 aa6.7□□□□□ -1.34
ATP2B4-207ENST00000484746 CHAMP1Q96JM3 812 aa6.7□□□□□ -1.34
ATP2B4-207ENST00000484746 U3KPZ7 1027 aaPredicted RBP6.7□□□□□ -1.34
ATP2B4-207ENST00000484746 SLC3A2P08195 630 aaKnown RBP6.7□□□□□ -1.34
ATP2B4-207ENST00000484746 SAFBQ15424 915 aaKnown RBP eCLIP6.7□□□□□ -1.34
ATP2B4-207ENST00000484746 CDC5LQ99459 802 aaKnown RBP6.7□□□□□ -1.34
ATP2B4-207ENST00000484746 UPF3BQ9BZI7 483 aaKnown RBP6.7□□□□□ -1.34
ATP2B4-207ENST00000484746 USP32Q8NFA0 1604 aa6.7□□□□□ -1.34
ATP2B4-207ENST00000484746 FER1L4A9Z1Z3 1794 aa6.7□□□□□ -1.34
ATP2B4-207ENST00000484746 DZIP3Q86Y13 1208 aaKnown RBP6.7□□□□□ -1.34
ATP2B4-207ENST00000484746 BICC1Q9H694 974 aaKnown RBP6.7□□□□□ -1.34
ATP2B4-207ENST00000484746 LRP2BPQ9P2M1 347 aa6.7□□□□□ -1.34
ATP2B4-207ENST00000484746 ANAPC15P60006 121 aa6.7□□□□□ -1.34
ATP2B4-207ENST00000484746 IMMTQ16891 758 aaKnown RBP6.7□□□□□ -1.34
ATP2B4-207ENST00000484746 CCDC191Q8NCU4 936 aa6.7□□□□□ -1.34
ATP2B4-207ENST00000484746 BICD2Q8TD16 824 aa6.7□□□□□ -1.34
ATP2B4-207ENST00000484746 USP44Q9H0E7 712 aa6.7□□□□□ -1.34
ATP2B4-207ENST00000484746 C1orf167Q5SNV9 1468 aa6.7□□□□□ -1.34
ATP2B4-207ENST00000484746 AOX1Q06278 1338 aa6.69□□□□□ -1.34
ATP2B4-207ENST00000484746 NCAPD2Q15021 1401 aa6.69□□□□□ -1.34
ATP2B4-207ENST00000484746 NBPF7P0C2Y1 421 aaPredicted RBP6.69□□□□□ -1.34
ATP2B4-207ENST00000484746 CAVIN4Q5BKX8 364 aa6.69□□□□□ -1.34
ATP2B4-207ENST00000484746 SNX21Q969T3 373 aa6.69□□□□□ -1.34
ATP2B4-207ENST00000484746 TRIM34Q9BYJ4 488 aa6.69□□□□□ -1.34
ATP2B4-207ENST00000484746 SH2B1Q9NRF2 756 aaPredicted RBP6.69□□□□□ -1.34
ATP2B4-207ENST00000484746 RAI14Q9P0K7 980 aa6.69□□□□□ -1.34
ATP2B4-207ENST00000484746 SLIT1O75093 1534 aa6.69□□□□□ -1.34
ATP2B4-207ENST00000484746 PNMA6EA0A0J9YXQ4 647 aa6.69□□□□□ -1.34
ATP2B4-207ENST00000484746 GOLIM4O00461 696 aa6.69□□□□□ -1.34
ATP2B4-207ENST00000484746 A1BGP04217 495 aa6.69□□□□□ -1.34
ATP2B4-207ENST00000484746 UQCRFS1P1P0C7P4 283 aa6.69□□□□□ -1.34
ATP2B4-207ENST00000484746 KIAA2012Q0VF49 1180 aa6.69□□□□□ -1.34
ATP2B4-207ENST00000484746 MAP3K12Q12852 859 aa6.69□□□□□ -1.34
ATP2B4-207ENST00000484746 GCKRQ14397 625 aa6.69□□□□□ -1.34
ATP2B4-207ENST00000484746 TTF1Q15361 905 aaPredicted RBP6.69□□□□□ -1.34
ATP2B4-207ENST00000484746 CCDC152Q4G0S7 254 aa6.69□□□□□ -1.34
ATP2B4-207ENST00000484746 AIDAQ96BJ3 306 aa6.69□□□□□ -1.34
ATP2B4-207ENST00000484746 KDRP35968 1356 aa6.69□□□□□ -1.34
ATP2B4-207ENST00000484746 HMGB1P09429 215 aaKnown RBP6.68□□□□□ -1.34
ATP2B4-207ENST00000484746 SSH3Q8TE77 659 aa6.68□□□□□ -1.34
ATP2B4-207ENST00000484746 AK7Q96M32 723 aa6.68□□□□□ -1.34
ATP2B4-207ENST00000484746 TNS3Q68CZ2 1445 aa6.68□□□□□ -1.34
ATP2B4-207ENST00000484746 ARHGAP23Q9P227 1491 aa6.68□□□□□ -1.34
ATP2B4-207ENST00000484746 PRPF40AO75400 957 aaKnown RBP6.68□□□□□ -1.34
ATP2B4-207ENST00000484746 FOSBP53539 338 aa6.68□□□□□ -1.34
ATP2B4-207ENST00000484746 RRP12Q5JTH9 1297 aaKnown RBP6.68□□□□□ -1.34
ATP2B4-207ENST00000484746 BEND3Q5T5X7 828 aa6.68□□□□□ -1.34
ATP2B4-207ENST00000484746 LARP1BQ659C4 914 aaKnown RBP6.68□□□□□ -1.34
ATP2B4-207ENST00000484746 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.68□□□□□ -1.34
ATP2B4-207ENST00000484746 DNAJC10Q8IXB1 793 aa6.68□□□□□ -1.34
ATP2B4-207ENST00000484746 HMG20BQ9P0W2 317 aa6.68□□□□□ -1.34
ATP2B4-207ENST00000484746 LIMCH1Q9UPQ0 1083 aa6.68□□□□□ -1.34
ATP2B4-207ENST00000484746 USP16Q9Y5T5 823 aa6.68□□□□□ -1.34
ATP2B4-207ENST00000484746 CBX1P83916 185 aa6.68□□□□□ -1.34
ATP2B4-207ENST00000484746 STK3Q13188 491 aa6.68□□□□□ -1.34
ATP2B4-207ENST00000484746 SF3B2Q13435 895 aaKnown RBP6.68□□□□□ -1.34
ATP2B4-207ENST00000484746 ATP2B3Q16720 1220 aa6.68□□□□□ -1.34
ATP2B4-207ENST00000484746 CCDC73Q6ZRK6 1079 aa6.68□□□□□ -1.34
ATP2B4-207ENST00000484746 PLCD3Q8N3E9 789 aa6.68□□□□□ -1.34
ATP2B4-207ENST00000484746 SUCLG2Q96I99 432 aa6.68□□□□□ -1.34
ATP2B4-207ENST00000484746 UTP14AQ9BVJ6 771 aaKnown RBP6.68□□□□□ -1.34
ATP2B4-207ENST00000484746 CD2BP2O95400 341 aaKnown RBP6.68□□□□□ -1.34
ATP2B4-207ENST00000484746 ZFYP08048 801 aaPredicted RBP6.68□□□□□ -1.34
ATP2B4-207ENST00000484746 XBP1P17861 261 aa6.68□□□□□ -1.34
ATP2B4-207ENST00000484746 CHMLP26374 656 aa6.68□□□□□ -1.34
ATP2B4-207ENST00000484746 TDO2P48775 406 aa6.68□□□□□ -1.34
ATP2B4-207ENST00000484746 ITSN1Q15811 1721 aa6.68□□□□□ -1.34
ATP2B4-207ENST00000484746 RASSF8Q8NHQ8 419 aa6.68□□□□□ -1.34
ATP2B4-207ENST00000484746 OTUD7AQ8TE49 926 aaPredicted RBP6.68□□□□□ -1.34
ATP2B4-207ENST00000484746 RBM27Q9P2N5 1060 aaKnown RBP6.68□□□□□ -1.34
ATP2B4-207ENST00000484746 NEURL1BA8MQ27 555 aa6.67□□□□□ -1.34
ATP2B4-207ENST00000484746 IRS4O14654 1257 aaPredicted RBP6.67□□□□□ -1.34
ATP2B4-207ENST00000484746 PRIM1P49642 420 aaKnown RBP6.67□□□□□ -1.34
ATP2B4-207ENST00000484746 MAP7D2Q96T17 732 aa6.67□□□□□ -1.34
ATP2B4-207ENST00000484746 ABCF2Q9UG63 623 aa6.67□□□□□ -1.34
ATP2B4-207ENST00000484746 NIP7Q9Y221 180 aaKnown RBP eCLIP6.67□□□□□ -1.34
ATP2B4-207ENST00000484746 IQSEC2Q5JU85 1478 aa6.67□□□□□ -1.34
ATP2B4-207ENST00000484746 CD163L1Q9NR16 1453 aa6.67□□□□□ -1.34
ATP2B4-207ENST00000484746 OFD1O75665 1012 aa6.67□□□□□ -1.34
ATP2B4-207ENST00000484746 IPO4Q8TEX9 1081 aaKnown RBP6.67□□□□□ -1.34
ATP2B4-207ENST00000484746 ZNF396Q96N95 335 aaPredicted RBP6.67□□□□□ -1.34
ATP2B4-207ENST00000484746 SIGLEC1Q9BZZ2 1709 aa6.67□□□□□ -1.34
ATP2B4-207ENST00000484746 RFC4P35249 363 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms