RNA–Protein interactions for RNA: ENST00000483821.1

RXRB-205, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-205ENST00000483821 ZNF34Q8IZ26 560 aa16.54■□□□□ 0.24
RXRB-205ENST00000483821 RHPN1Q8TCX5 695 aa16.54■□□□□ 0.24
RXRB-205ENST00000483821 AK7Q96M32 723 aa16.54■□□□□ 0.24
RXRB-205ENST00000483821 PLA2G12BQ9BX93 195 aa16.54■□□□□ 0.24
RXRB-205ENST00000483821 RTCBQ9Y3I0 505 aaKnown RBP16.54■□□□□ 0.24
RXRB-205ENST00000483821 RBM19Q9Y4C8 960 aaKnown RBP16.54■□□□□ 0.24
RXRB-205ENST00000483821 CAMTA2O94983 1202 aa16.53■□□□□ 0.24
RXRB-205ENST00000483821 PLEKHM2Q8IWE5 1019 aa16.53■□□□□ 0.24
RXRB-205ENST00000483821 COPRSQ9NQ92 184 aa16.53■□□□□ 0.24
RXRB-205ENST00000483821 AFDNP55196 1824 aaKnown RBP16.53■□□□□ 0.24
RXRB-205ENST00000483821 TRIM37O94972 964 aa16.52■□□□□ 0.24
RXRB-205ENST00000483821 FOXO4P98177 505 aa16.52■□□□□ 0.24
RXRB-205ENST00000483821 LMBR1LQ6UX01 489 aa16.52■□□□□ 0.24
RXRB-205ENST00000483821 OSBPL3Q9H4L5 887 aa16.52■□□□□ 0.24
RXRB-205ENST00000483821 TRMT112Q9UI30 125 aaKnown RBP16.52■□□□□ 0.24
RXRB-205ENST00000483821 GNPATO15228 680 aa16.51■□□□□ 0.23
RXRB-205ENST00000483821 SMARCA5O60264 1052 aaPredicted RBP16.51■□□□□ 0.23
RXRB-205ENST00000483821 ZPR1O75312 459 aa16.51■□□□□ 0.23
RXRB-205ENST00000483821 ADRA2BP18089 450 aa16.51■□□□□ 0.23
RXRB-205ENST00000483821 GPTP24298 496 aa16.51■□□□□ 0.23
RXRB-205ENST00000483821 C8orf34Q49A92 452 aa16.51■□□□□ 0.23
RXRB-205ENST00000483821 EPHA10Q5JZY3 1008 aa16.51■□□□□ 0.23
RXRB-205ENST00000483821 CLASRPQ8N2M8 674 aaKnown RBP16.51■□□□□ 0.23
RXRB-205ENST00000483821 JARID2Q92833 1246 aaPredicted RBP16.51■□□□□ 0.23
RXRB-205ENST00000483821 UTP14AQ9BVJ6 771 aaKnown RBP16.51■□□□□ 0.23
RXRB-205ENST00000483821 AOX1Q06278 1338 aa16.5■□□□□ 0.23
RXRB-205ENST00000483821 SBF2Q86WG5 1849 aa16.5■□□□□ 0.23
RXRB-205ENST00000483821 NARFQ9UHQ1 456 aa16.5■□□□□ 0.23
RXRB-205ENST00000483821 FBXO3Q9UK99 471 aa16.5■□□□□ 0.23
RXRB-205ENST00000483821 CHMP3Q9Y3E7 222 aa16.5■□□□□ 0.23
RXRB-205ENST00000483821 COL5A3P25940 1745 aaPredicted RBP16.5■□□□□ 0.23
RXRB-205ENST00000483821 MX1P20591 662 aa16.49■□□□□ 0.23
RXRB-205ENST00000483821 PDE1AP54750 535 aa16.49■□□□□ 0.23
RXRB-205ENST00000483821 TRAPPC3LQ5T215 181 aa16.49■□□□□ 0.23
RXRB-205ENST00000483821 TTC22Q5TAA0 569 aa16.49■□□□□ 0.23
RXRB-205ENST00000483821 C16orf71Q8IYS4 520 aaPredicted RBP16.49■□□□□ 0.23
RXRB-205ENST00000483821 FAM89AQ96GI7 184 aa16.49■□□□□ 0.23
RXRB-205ENST00000483821 GPATCH3Q96I76 525 aa16.49■□□□□ 0.23
RXRB-205ENST00000483821 UPF2Q9HAU5 1272 aaKnown RBP16.49■□□□□ 0.23
RXRB-205ENST00000483821 STAP2Q9UGK3 403 aa16.49■□□□□ 0.23
RXRB-205ENST00000483821 NIP7Q9Y221 180 aaKnown RBP eCLIP16.49■□□□□ 0.23
RXRB-205ENST00000483821 SH3TC1Q8TE82 1336 aa16.48■□□□□ 0.23
RXRB-205ENST00000483821 IRS4O14654 1257 aaPredicted RBP16.48■□□□□ 0.23
RXRB-205ENST00000483821 PLSCR1O15162 318 aa16.48■□□□□ 0.23
RXRB-205ENST00000483821 PDE8AO60658 829 aa16.48■□□□□ 0.23
RXRB-205ENST00000483821 RFX5P48382 616 aaPredicted RBP16.48■□□□□ 0.23
RXRB-205ENST00000483821 KCNQ4P56696 695 aa16.48■□□□□ 0.23
RXRB-205ENST00000483821 CCDC57Q2TAC2 916 aa16.48■□□□□ 0.23
RXRB-205ENST00000483821 RTL5Q5HYW3 569 aaPredicted RBP16.48■□□□□ 0.23
RXRB-205ENST00000483821 BCL11AQ9H165 835 aa16.48■□□□□ 0.23
RXRB-205ENST00000483821 LY75O60449 1722 aa16.48■□□□□ 0.23
RXRB-205ENST00000483821 CSF1RP07333 972 aa16.47■□□□□ 0.23
RXRB-205ENST00000483821 IFIT2P09913 472 aaKnown RBP16.47■□□□□ 0.23
RXRB-205ENST00000483821 RFC4P35249 363 aa16.47■□□□□ 0.23
RXRB-205ENST00000483821 PTPN12Q05209 780 aaKnown RBP16.47■□□□□ 0.23
RXRB-205ENST00000483821 CASC1Q6TDU7 716 aa16.47■□□□□ 0.23
RXRB-205ENST00000483821 PA2G4Q9UQ80 394 aaKnown RBP16.47■□□□□ 0.23
RXRB-205ENST00000483821 ERC2O15083 957 aa16.46■□□□□ 0.23
RXRB-205ENST00000483821 CIAO1O76071 339 aa16.46■□□□□ 0.23
RXRB-205ENST00000483821 IL15P40933 162 aaPredicted RBP16.46■□□□□ 0.23
RXRB-205ENST00000483821 IFIT5Q13325 482 aaKnown RBP16.46■□□□□ 0.23
RXRB-205ENST00000483821 IL1RAPL2Q9NP60 686 aa16.46■□□□□ 0.23
RXRB-205ENST00000483821 BRWD3Q6RI45 1802 aa16.46■□□□□ 0.23
RXRB-205ENST00000483821 TTC41PQ6P2S7 1318 aa16.45■□□□□ 0.22
RXRB-205ENST00000483821 CTSWP56202 376 aa16.45■□□□□ 0.22
RXRB-205ENST00000483821 TAF7LQ5H9L4 462 aa16.45■□□□□ 0.22
RXRB-205ENST00000483821 SUSD4Q5VX71 490 aa16.45■□□□□ 0.22
RXRB-205ENST00000483821 NYXQ9GZU5 481 aa16.45■□□□□ 0.22
RXRB-205ENST00000483821 SIL1Q9H173 461 aa16.45■□□□□ 0.22
RXRB-205ENST00000483821 MYH14Q7Z406 1995 aaKnown RBP16.45■□□□□ 0.22
RXRB-205ENST00000483821 NUP98P52948 1817 aa16.45■□□□□ 0.22
RXRB-205ENST00000483821 UBN2Q6ZU65 1347 aa16.45■□□□□ 0.22
RXRB-205ENST00000483821 ANKRD36CQ5JPF3 1778 aa16.44■□□□□ 0.22
RXRB-205ENST00000483821 ANKRD18BA2A2Z9 1011 aa16.44■□□□□ 0.22
RXRB-205ENST00000483821 CDC45O75419 566 aa16.44■□□□□ 0.22
RXRB-205ENST00000483821 APBA3O96018 575 aa16.44■□□□□ 0.22
RXRB-205ENST00000483821 ANP32AP39687 249 aaKnown RBP16.44■□□□□ 0.22
RXRB-205ENST00000483821 TXNRD1Q16881 649 aa16.44■□□□□ 0.22
RXRB-205ENST00000483821 OTUD7AQ8TE49 926 aaPredicted RBP16.44■□□□□ 0.22
RXRB-205ENST00000483821 ARHGEF1Q92888 912 aaKnown RBP16.44■□□□□ 0.22
RXRB-205ENST00000483821 SETDB2Q96T68 719 aa16.44■□□□□ 0.22
RXRB-205ENST00000483821 RGS17Q9UGC6 210 aaPredicted RBP16.44■□□□□ 0.22
RXRB-205ENST00000483821 SALL3Q9BXA9 1300 aa16.44■□□□□ 0.22
RXRB-205ENST00000483821 USP42Q9H9J4 1324 aaKnown RBP16.44■□□□□ 0.22
RXRB-205ENST00000483821 EYA2O00167 538 aa16.43■□□□□ 0.22
RXRB-205ENST00000483821 SASH1O94885 1247 aa16.43■□□□□ 0.22
RXRB-205ENST00000483821 SSFA2P28290 1259 aa16.43■□□□□ 0.22
RXRB-205ENST00000483821 USPL1Q5W0Q7 1092 aa16.43■□□□□ 0.22
RXRB-205ENST00000483821 POTEAQ6S8J7 498 aa16.43■□□□□ 0.22
RXRB-205ENST00000483821 AACSQ86V21 672 aa16.43■□□□□ 0.22
RXRB-205ENST00000483821 TTLL11Q8NHH1 800 aa16.43■□□□□ 0.22
RXRB-205ENST00000483821 GPR108Q9NPR9 543 aa16.43■□□□□ 0.22
RXRB-205ENST00000483821 LRRC4BQ9NT99 713 aa16.43■□□□□ 0.22
RXRB-205ENST00000483821 GLRX3O76003 335 aaKnown RBP16.42■□□□□ 0.22
RXRB-205ENST00000483821 GTF2E1P29083 439 aaPredicted RBP16.42■□□□□ 0.22
RXRB-205ENST00000483821 NUTM1Q86Y26 1132 aa16.42■□□□□ 0.22
RXRB-205ENST00000483821 ECHDC1Q9NTX5 307 aa16.42■□□□□ 0.22
RXRB-205ENST00000483821 C4BP0C0L5 1744 aa16.42■□□□□ 0.22
RXRB-205ENST00000483821 NTSR2O95665 410 aa16.41■□□□□ 0.22
RXRB-205ENST00000483821 CCDC152Q4G0S7 254 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms