RNA–Protein interactions for RNA: ENST00000483442.5

LRCH3-217, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 562 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-217ENST00000483442 COL17A1Q9UMD9 1497 aaPredicted RBP6.36□□□□□ -1.39
LRCH3-217ENST00000483442 USP17L3A6NCW0 530 aa6.36□□□□□ -1.39
LRCH3-217ENST00000483442 USP17L4A6NCW7 530 aa6.36□□□□□ -1.39
LRCH3-217ENST00000483442 K7ELQ4 463 aaPredicted RBP6.36□□□□□ -1.39
LRCH3-217ENST00000483442 CCDC102BQ68D86 513 aa6.36□□□□□ -1.39
LRCH3-217ENST00000483442 USP17L2Q6R6M4 530 aa6.36□□□□□ -1.39
LRCH3-217ENST00000483442 USP17L1Q7RTZ2 530 aa6.36□□□□□ -1.39
LRCH3-217ENST00000483442 ALYREFQ86V81 257 aaKnown RBP6.36□□□□□ -1.39
LRCH3-217ENST00000483442 ZNF280CQ8ND82 737 aa6.36□□□□□ -1.39
LRCH3-217ENST00000483442 HSH2DQ96JZ2 352 aa6.36□□□□□ -1.39
LRCH3-217ENST00000483442 ZNF232Q9UNY5 417 aa6.36□□□□□ -1.39
LRCH3-217ENST00000483442 HCN4Q9Y3Q4 1203 aa6.36□□□□□ -1.39
LRCH3-217ENST00000483442 COL9A3Q14050 684 aaPredicted RBP6.35□□□□□ -1.39
LRCH3-217ENST00000483442 C8orf86Q6ZUL3 223 aa6.35□□□□□ -1.39
LRCH3-217ENST00000483442 RAB44Q7Z6P3 723 aaPredicted RBP6.35□□□□□ -1.39
LRCH3-217ENST00000483442 PLEKHM2Q8IWE5 1019 aa6.35□□□□□ -1.39
LRCH3-217ENST00000483442 PLVAPQ9BX97 442 aa6.35□□□□□ -1.39
LRCH3-217ENST00000483442 STARD13Q9Y3M8 1113 aa6.35□□□□□ -1.39
LRCH3-217ENST00000483442 ADCY10Q96PN6 1610 aa6.35□□□□□ -1.39
LRCH3-217ENST00000483442 ADAMTS12P58397 1594 aa6.35□□□□□ -1.39
LRCH3-217ENST00000483442 PTPRGP23470 1445 aa6.34□□□□□ -1.39
LRCH3-217ENST00000483442 SERTM1A2A2V5 107 aa6.34□□□□□ -1.39
LRCH3-217ENST00000483442 SFI1A8K8P3 1242 aa6.34□□□□□ -1.39
LRCH3-217ENST00000483442 C21orf2O43822 256 aa6.34□□□□□ -1.39
LRCH3-217ENST00000483442 UBTFP17480 764 aaKnown RBP6.34□□□□□ -1.39
LRCH3-217ENST00000483442 LAMC2Q13753 1193 aa6.34□□□□□ -1.39
LRCH3-217ENST00000483442 POTEAQ6S8J7 498 aa6.34□□□□□ -1.39
LRCH3-217ENST00000483442 TSEN2Q8NCE0 465 aaKnown RBP6.34□□□□□ -1.39
LRCH3-217ENST00000483442 ELOA3CA0A087WX78 387 aaPredicted RBP6.33□□□□□ -1.4
LRCH3-217ENST00000483442 ELOA3DA6NLF2 546 aaPredicted RBP6.33□□□□□ -1.4
LRCH3-217ENST00000483442 ATP9BO43861 1147 aa6.33□□□□□ -1.4
LRCH3-217ENST00000483442 DOC2BQ14184 412 aa6.33□□□□□ -1.4
LRCH3-217ENST00000483442 ELOA3BQ3SY89 546 aa6.33□□□□□ -1.4
LRCH3-217ENST00000483442 OGFOD1Q8N543 542 aa6.33□□□□□ -1.4
LRCH3-217ENST00000483442 ELOA3Q8NG57 546 aa6.33□□□□□ -1.4
LRCH3-217ENST00000483442 GAS2L2Q8NHY3 880 aa6.33□□□□□ -1.4
LRCH3-217ENST00000483442 RHPN1Q8TCX5 695 aa6.33□□□□□ -1.4
LRCH3-217ENST00000483442 CLUAP1Q96AJ1 413 aa6.33□□□□□ -1.4
LRCH3-217ENST00000483442 PHACTR1Q9C0D0 580 aa6.33□□□□□ -1.4
LRCH3-217ENST00000483442 MKRN1Q9UHC7 482 aaKnown RBP6.33□□□□□ -1.4
LRCH3-217ENST00000483442 ASXL2Q76L83 1435 aa6.33□□□□□ -1.4
LRCH3-217ENST00000483442 DISP3Q9P2K9 1392 aa6.32□□□□□ -1.4
LRCH3-217ENST00000483442 RAD21O60216 631 aa6.32□□□□□ -1.4
LRCH3-217ENST00000483442 LGR5O75473 907 aa6.32□□□□□ -1.4
LRCH3-217ENST00000483442 TRIM50Q86XT4 487 aa6.32□□□□□ -1.4
LRCH3-217ENST00000483442 ZNF594Q96JF6 807 aaPredicted RBP6.32□□□□□ -1.4
LRCH3-217ENST00000483442 ADARB2-AS1A8MUL3 147 aa6.31□□□□□ -1.4
LRCH3-217ENST00000483442 FAM229AH3BQW9 127 aa6.31□□□□□ -1.4
LRCH3-217ENST00000483442 SIN3BO75182 1162 aa6.31□□□□□ -1.4
LRCH3-217ENST00000483442 PSMA6P60900 246 aaKnown RBP6.31□□□□□ -1.4
LRCH3-217ENST00000483442 WWC1Q8IX03 1113 aa6.31□□□□□ -1.4
LRCH3-217ENST00000483442 SIX5Q8N196 739 aa6.31□□□□□ -1.4
LRCH3-217ENST00000483442 FNBP4Q8N3X1 1017 aaPredicted RBP6.31□□□□□ -1.4
LRCH3-217ENST00000483442 SUSD3Q96L08 255 aa6.31□□□□□ -1.4
LRCH3-217ENST00000483442 NOP53Q9NZM5 478 aaKnown RBP6.31□□□□□ -1.4
LRCH3-217ENST00000483442 ERICH3Q5RHP9 1530 aa6.3□□□□□ -1.4
LRCH3-217ENST00000483442 PLB1Q6P1J6 1458 aa6.3□□□□□ -1.4
LRCH3-217ENST00000483442 PIK3R2O00459 728 aa6.3□□□□□ -1.4
LRCH3-217ENST00000483442 ALBP02768 609 aa6.3□□□□□ -1.4
LRCH3-217ENST00000483442 ATP1A2P50993 1020 aa6.3□□□□□ -1.4
LRCH3-217ENST00000483442 HIRAP54198 1017 aaPredicted RBP6.3□□□□□ -1.4
LRCH3-217ENST00000483442 TYRO3Q06418 890 aa6.3□□□□□ -1.4
LRCH3-217ENST00000483442 SPEM2Q0P670 501 aa6.3□□□□□ -1.4
LRCH3-217ENST00000483442 FLIIQ13045 1269 aa6.3□□□□□ -1.4
LRCH3-217ENST00000483442 C1orf53Q5VUE5 145 aa6.3□□□□□ -1.4
LRCH3-217ENST00000483442 LARGE2Q8N3Y3 721 aa6.3□□□□□ -1.4
LRCH3-217ENST00000483442 TNFRSF25Q93038 417 aa6.3□□□□□ -1.4
LRCH3-217ENST00000483442 NEUROD4Q9HD90 331 aa6.3□□□□□ -1.4
LRCH3-217ENST00000483442 BRD7Q9NPI1 651 aa6.3□□□□□ -1.4
LRCH3-217ENST00000483442 TFIP11Q9UBB9 837 aaKnown RBP6.3□□□□□ -1.4
LRCH3-217ENST00000483442 PALM3A6NDB9 673 aaPredicted RBP6.29□□□□□ -1.4
LRCH3-217ENST00000483442 M0R082 166 aa6.29□□□□□ -1.4
LRCH3-217ENST00000483442 M0R2N6 131 aa6.29□□□□□ -1.4
LRCH3-217ENST00000483442 MICALL1Q8N3F8 863 aa6.29□□□□□ -1.4
LRCH3-217ENST00000483442 ZNF417Q8TAU3 575 aa6.29□□□□□ -1.4
LRCH3-217ENST00000483442 CEP63Q96MT8 703 aa6.29□□□□□ -1.4
LRCH3-217ENST00000483442 ZNF587Q96SQ5 575 aaPredicted RBP6.29□□□□□ -1.4
LRCH3-217ENST00000483442 GPC6Q9Y625 555 aaPredicted RBP6.29□□□□□ -1.4
LRCH3-217ENST00000483442 KIAA0586Q9BVV6 1533 aa6.29□□□□□ -1.4
LRCH3-217ENST00000483442 SUPT5HO00267 1087 aaKnown RBP6.28□□□□□ -1.4
LRCH3-217ENST00000483442 PPP1R12BO60237 982 aaPredicted RBP6.28□□□□□ -1.4
LRCH3-217ENST00000483442 ALAS2P22557 587 aa6.28□□□□□ -1.4
LRCH3-217ENST00000483442 HSPA2P54652 639 aa6.28□□□□□ -1.4
LRCH3-217ENST00000483442 KCNQ4P56696 695 aa6.28□□□□□ -1.4
LRCH3-217ENST00000483442 C20orf204Q6ZNR8 217 aa6.28□□□□□ -1.4
LRCH3-217ENST00000483442 ALDH16A1Q8IZ83 802 aa6.28□□□□□ -1.4
LRCH3-217ENST00000483442 Q8N3U1 123 aa6.28□□□□□ -1.4
LRCH3-217ENST00000483442 ABCC2Q92887 1545 aa6.28□□□□□ -1.4
LRCH3-217ENST00000483442 ATAD2Q6PL18 1390 aa6.28□□□□□ -1.4
LRCH3-217ENST00000483442 TNIKQ9UKE5 1360 aa6.28□□□□□ -1.4
LRCH3-217ENST00000483442 SPATA31C1P0DKV0 1188 aa6.27□□□□□ -1.41
LRCH3-217ENST00000483442 NID1P14543 1247 aa6.27□□□□□ -1.41
LRCH3-217ENST00000483442 GRNP28799 593 aaKnown RBP6.27□□□□□ -1.41
LRCH3-217ENST00000483442 ADH7P40394 386 aa6.27□□□□□ -1.41
LRCH3-217ENST00000483442 SCG3Q8WXD2 468 aaKnown RBP6.27□□□□□ -1.41
LRCH3-217ENST00000483442 GLMNQ92990 594 aa6.27□□□□□ -1.41
LRCH3-217ENST00000483442 NGLY1Q96IV0 654 aa6.27□□□□□ -1.41
LRCH3-217ENST00000483442 C2orf49Q9BVC5 232 aaPredicted RBP6.27□□□□□ -1.41
LRCH3-217ENST00000483442 SEMA6BQ9H3T3 888 aa6.27□□□□□ -1.41
LRCH3-217ENST00000483442 KCNH4Q9UQ05 1017 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms