RNA–Protein interactions for RNA: ENST00000483031.1

RPA3-207, Transcript of replication protein A3, humanhuman

TSL 2

Gene RPA3, Length 641 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-207ENST00000483031 ZBTB7BO15156 539 aaPredicted RBP7.9□□□□□ -1.14
RPA3-207ENST00000483031 HIF1AQ16665 826 aa7.9□□□□□ -1.14
RPA3-207ENST00000483031 M0R2N6 131 aa7.89□□□□□ -1.15
RPA3-207ENST00000483031 SHISA2Q6UWI4 295 aa7.89□□□□□ -1.15
RPA3-207ENST00000483031 KRTAP1-3Q8IUG1 177 aa7.89□□□□□ -1.15
RPA3-207ENST00000483031 PLEKHM2Q8IWE5 1019 aa7.89□□□□□ -1.15
RPA3-207ENST00000483031 NUDT8Q8WV74 236 aa7.89□□□□□ -1.15
RPA3-207ENST00000483031 TP53INP1Q96A56 240 aa7.89□□□□□ -1.15
RPA3-207ENST00000483031 USP21Q9UK80 565 aa7.89□□□□□ -1.15
RPA3-207ENST00000483031 USP17L3A6NCW0 530 aa7.88□□□□□ -1.15
RPA3-207ENST00000483031 USP17L4A6NCW7 530 aa7.88□□□□□ -1.15
RPA3-207ENST00000483031 PPP1R12BO60237 982 aaPredicted RBP7.88□□□□□ -1.15
RPA3-207ENST00000483031 CLDN10P78369 228 aa7.88□□□□□ -1.15
RPA3-207ENST00000483031 USP17L2Q6R6M4 530 aa7.88□□□□□ -1.15
RPA3-207ENST00000483031 USP17L1Q7RTZ2 530 aa7.88□□□□□ -1.15
RPA3-207ENST00000483031 BTLAQ7Z6A9 289 aa7.88□□□□□ -1.15
RPA3-207ENST00000483031 PALM3A6NDB9 673 aaPredicted RBP7.87□□□□□ -1.15
RPA3-207ENST00000483031 PSAPL1Q6NUJ1 521 aa7.87□□□□□ -1.15
RPA3-207ENST00000483031 ALDH16A1Q8IZ83 802 aa7.87□□□□□ -1.15
RPA3-207ENST00000483031 FMR1NBQ8N0W7 255 aaPredicted RBP7.87□□□□□ -1.15
RPA3-207ENST00000483031 LARGE2Q8N3Y3 721 aa7.87□□□□□ -1.15
RPA3-207ENST00000483031 PNMA5Q96PV4 448 aa7.87□□□□□ -1.15
RPA3-207ENST00000483031 DNAJB12Q9NXW2 375 aaKnown RBP7.87□□□□□ -1.15
RPA3-207ENST00000483031 RBM19Q9Y4C8 960 aaKnown RBP7.87□□□□□ -1.15
RPA3-207ENST00000483031 HYAL3O43820 417 aaPredicted RBP7.86□□□□□ -1.15
RPA3-207ENST00000483031 RGS9O75916 674 aaPredicted RBP7.86□□□□□ -1.15
RPA3-207ENST00000483031 AFF1P51825 1210 aaKnown RBP7.86□□□□□ -1.15
RPA3-207ENST00000483031 OGFOD1Q8N543 542 aa7.86□□□□□ -1.15
RPA3-207ENST00000483031 DMRTC2Q8IXT2 367 aaPredicted RBP7.85□□□□□ -1.15
RPA3-207ENST00000483031 TSEN2Q8NCE0 465 aaKnown RBP7.85□□□□□ -1.15
RPA3-207ENST00000483031 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.85□□□□□ -1.15
RPA3-207ENST00000483031 LCE3BQ5TA77 95 aa7.84□□□□□ -1.15
RPA3-207ENST00000483031 SIX5Q8N196 739 aa7.84□□□□□ -1.15
RPA3-207ENST00000483031 STAG2Q8N3U4 1231 aa7.84□□□□□ -1.15
RPA3-207ENST00000483031 KRTAP4-12Q9BQ66 201 aa7.84□□□□□ -1.15
RPA3-207ENST00000483031 SSBP4Q9BWG4 385 aaPredicted RBP7.84□□□□□ -1.15
RPA3-207ENST00000483031 GSX2Q9BZM3 304 aa7.84□□□□□ -1.15
RPA3-207ENST00000483031 NAGPAQ9UK23 515 aa7.84□□□□□ -1.15
RPA3-207ENST00000483031 C21orf2O43822 256 aa7.83□□□□□ -1.16
RPA3-207ENST00000483031 ATP9BO43861 1147 aa7.83□□□□□ -1.16
RPA3-207ENST00000483031 RAD21O60216 631 aa7.83□□□□□ -1.16
RPA3-207ENST00000483031 CCINQ13939 588 aa7.83□□□□□ -1.16
RPA3-207ENST00000483031 PCSK7Q16549 785 aa7.83□□□□□ -1.16
RPA3-207ENST00000483031 IER5Q5VY09 327 aa7.83□□□□□ -1.16
RPA3-207ENST00000483031 DTWD1Q8N5C7 304 aa7.83□□□□□ -1.16
RPA3-207ENST00000483031 GAS2L2Q8NHY3 880 aa7.83□□□□□ -1.16
RPA3-207ENST00000483031 NGLY1Q96IV0 654 aa7.83□□□□□ -1.16
RPA3-207ENST00000483031 ZNF594Q96JF6 807 aaPredicted RBP7.83□□□□□ -1.16
RPA3-207ENST00000483031 C2orf49Q9BVC5 232 aaPredicted RBP7.83□□□□□ -1.16
RPA3-207ENST00000483031 MKRN1Q9UHC7 482 aaKnown RBP7.83□□□□□ -1.16
RPA3-207ENST00000483031 ATAD2Q6PL18 1390 aa7.83□□□□□ -1.16
RPA3-207ENST00000483031 NFKB1P19838 968 aa7.82□□□□□ -1.16
RPA3-207ENST00000483031 MSL1Q68DK7 614 aa7.81□□□□□ -1.16
RPA3-207ENST00000483031 ILDR2Q71H61 639 aa7.81□□□□□ -1.16
RPA3-207ENST00000483031 FAM35AQ86V20 835 aa7.81□□□□□ -1.16
RPA3-207ENST00000483031 ADAMTS19Q8TE59 1207 aa7.81□□□□□ -1.16
RPA3-207ENST00000483031 CHMP7Q8WUX9 453 aaPredicted RBP7.81□□□□□ -1.16
RPA3-207ENST00000483031 SCG3Q8WXD2 468 aaKnown RBP7.81□□□□□ -1.16
RPA3-207ENST00000483031 POM121Q96HA1 1249 aa7.81□□□□□ -1.16
RPA3-207ENST00000483031 POM121CA8CG34 1229 aa7.8□□□□□ -1.16
RPA3-207ENST00000483031 TGFBR3LH3BV60 316 aa7.8□□□□□ -1.16
RPA3-207ENST00000483031 EPB42P16452 691 aa7.8□□□□□ -1.16
RPA3-207ENST00000483031 RTN1Q16799 776 aa7.8□□□□□ -1.16
RPA3-207ENST00000483031 FBXO11Q86XK2 927 aa7.8□□□□□ -1.16
RPA3-207ENST00000483031 WFDC12Q8WWY7 111 aa7.8□□□□□ -1.16
RPA3-207ENST00000483031 UCN2Q96RP3 112 aa7.8□□□□□ -1.16
RPA3-207ENST00000483031 FRRS1LQ9P0K9 344 aa7.8□□□□□ -1.16
RPA3-207ENST00000483031 CPB1P15086 417 aa7.79□□□□□ -1.16
RPA3-207ENST00000483031 HDGFL1Q5TGJ6 251 aa7.79□□□□□ -1.16
RPA3-207ENST00000483031 RNF112Q9ULX5 631 aa7.79□□□□□ -1.16
RPA3-207ENST00000483031 DKK1O94907 266 aa7.78□□□□□ -1.16
RPA3-207ENST00000483031 MAP3K6O95382 1288 aa7.78□□□□□ -1.16
RPA3-207ENST00000483031 IREB2P48200 963 aaKnown RBP7.78□□□□□ -1.16
RPA3-207ENST00000483031 WFDC8Q8IUA0 241 aa7.78□□□□□ -1.16
RPA3-207ENST00000483031 LPIN3Q9BQK8 851 aa7.78□□□□□ -1.16
RPA3-207ENST00000483031 SEC13P55735 322 aa7.77□□□□□ -1.17
RPA3-207ENST00000483031 ELMSAN1Q6PJG2 1045 aa7.77□□□□□ -1.17
RPA3-207ENST00000483031 IGF2-ASQ6U949 168 aa7.77□□□□□ -1.17
RPA3-207ENST00000483031 RASA1P20936 1047 aa7.76□□□□□ -1.17
RPA3-207ENST00000483031 NOS3P29474 1203 aa7.76□□□□□ -1.17
RPA3-207ENST00000483031 GRIK5Q16478 980 aa7.76□□□□□ -1.17
RPA3-207ENST00000483031 PERM1Q5SV97 790 aa7.76□□□□□ -1.17
RPA3-207ENST00000483031 DMGDHQ9UI17 866 aaKnown RBP7.76□□□□□ -1.17
RPA3-207ENST00000483031 PRKCSHP14314 528 aaPredicted RBP7.75□□□□□ -1.17
RPA3-207ENST00000483031 UBTFP17480 764 aaKnown RBP7.75□□□□□ -1.17
RPA3-207ENST00000483031 DHX32Q7L7V1 743 aaKnown RBP7.75□□□□□ -1.17
RPA3-207ENST00000483031 TTC9Q92623 222 aa7.75□□□□□ -1.17
RPA3-207ENST00000483031 BCS1LQ9Y276 419 aa7.75□□□□□ -1.17
RPA3-207ENST00000483031 ARID4AP29374 1257 aaPredicted RBP7.74□□□□□ -1.17
RPA3-207ENST00000483031 IDH3AP50213 366 aa7.74□□□□□ -1.17
RPA3-207ENST00000483031 PRR23CQ6ZRP0 262 aa7.74□□□□□ -1.17
RPA3-207ENST00000483031 KRT25Q7Z3Z0 450 aa7.74□□□□□ -1.17
RPA3-207ENST00000483031 TRPM4Q8TD43 1214 aa7.74□□□□□ -1.17
RPA3-207ENST00000483031 MEGF10Q96KG7 1140 aa7.74□□□□□ -1.17
RPA3-207ENST00000483031 HINFPQ9BQA5 517 aa7.74□□□□□ -1.17
RPA3-207ENST00000483031 GRNP28799 593 aaKnown RBP7.73□□□□□ -1.17
RPA3-207ENST00000483031 INPP5BP32019 993 aa7.73□□□□□ -1.17
RPA3-207ENST00000483031 GPLD1P80108 840 aa7.73□□□□□ -1.17
RPA3-207ENST00000483031 MLLT1Q03111 559 aaPredicted RBP7.73□□□□□ -1.17
RPA3-207ENST00000483031 C11orf16Q9NQ32 467 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms