RNA–Protein interactions for RNA: ENST00000482646.5

CREM-233, Transcript of cAMP responsive element modulator, human

TSL 3

Gene CREM, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CREM-233	ENST00000482646	USPL1	Q5W0Q7	1092 aa		27.95	■■■□□ 2.06
CREM-233	ENST00000482646	TNN	Q9UQP3	1299 aa		27.95	■■■□□ 2.06
CREM-233	ENST00000482646	CLEC4G	Q6UXB4	293 aa		27.94	■■■□□ 2.06
CREM-233	ENST00000482646	CCT4	P50991	539 aa	Known RBP	27.93	■■■□□ 2.06
CREM-233	ENST00000482646	HLF	Q16534	295 aa		27.93	■■■□□ 2.06
CREM-233	ENST00000482646	MYD88	Q99836	296 aa		27.93	■■■□□ 2.06
CREM-233	ENST00000482646	TCIRG1	Q13488	830 aa		27.91	■■■□□ 2.06
CREM-233	ENST00000482646	ARHGAP27	Q6ZUM4	889 aa		27.91	■■■□□ 2.06
CREM-233	ENST00000482646	PANK1	Q8TE04	598 aa		27.91	■■■□□ 2.06
CREM-233	ENST00000482646	RLBP1	P12271	317 aa		27.9	■■■□□ 2.06
CREM-233	ENST00000482646	LINS1	Q8NG48	757 aa		27.9	■■■□□ 2.06
CREM-233	ENST00000482646	SRCIN1	Q9C0H9	1055 aa		27.9	■■■□□ 2.06
CREM-233	ENST00000482646	BCL2L12	Q9HB09	334 aa		27.9	■■■□□ 2.06
CREM-233	ENST00000482646	DDR1	Q08345	913 aa		27.89	■■■□□ 2.06
CREM-233	ENST00000482646	BEND3	Q5T5X7	828 aa		27.89	■■■□□ 2.06
CREM-233	ENST00000482646	INTS3	Q68E01	1043 aa	Known RBP	27.89	■■■□□ 2.06
CREM-233	ENST00000482646	TMEM57	Q8N5G2	664 aa		27.89	■■■□□ 2.06
CREM-233	ENST00000482646	PIM2	Q9P1W9	311 aa		27.89	■■■□□ 2.06
CREM-233	ENST00000482646	C20orf194	Q5TEA3	1177 aa		27.88	■■■□□ 2.05
CREM-233	ENST00000482646	ALDH1L1	O75891	902 aa		27.87	■■■□□ 2.05
CREM-233	ENST00000482646	ITPRIP	Q8IWB1	547 aa		27.87	■■■□□ 2.05
CREM-233	ENST00000482646	ISCA1	Q9BUE6	129 aa		27.87	■■■□□ 2.05
CREM-233	ENST00000482646	IBTK	Q9P2D0	1353 aa	Predicted RBP	27.86	■■■□□ 2.05
CREM-233	ENST00000482646	ATP5J2-PTCD1	G3V325	749 aa		27.86	■■■□□ 2.05
CREM-233	ENST00000482646	POLRMT	O00411	1230 aa	Known RBP	27.86	■■■□□ 2.05
CREM-233	ENST00000482646	KCNA3	P22001	575 aa		27.86	■■■□□ 2.05
CREM-233	ENST00000482646	TM4SF1	P30408	202 aa		27.86	■■■□□ 2.05
CREM-233	ENST00000482646	NEURL1B	A8MQ27	555 aa		27.85	■■■□□ 2.05
CREM-233	ENST00000482646	IGKV5-2	P06315	115 aa		27.85	■■■□□ 2.05
CREM-233	ENST00000482646	GPT	P24298	496 aa		27.85	■■■□□ 2.05
CREM-233	ENST00000482646	MVP	Q14764	893 aa	Known RBP	27.85	■■■□□ 2.05
CREM-233	ENST00000482646	CWF19L2	Q2TBE0	894 aa	Known RBP	27.85	■■■□□ 2.05
CREM-233	ENST00000482646	ZNF34	Q8IZ26	560 aa		27.85	■■■□□ 2.05
CREM-233	ENST00000482646	NIP7	Q9Y221	180 aa	Known RBP eCLIP	27.85	■■■□□ 2.05
CREM-233	ENST00000482646	BRCA1	P38398	1863 aa	Known RBP	27.85	■■■□□ 2.05
CREM-233	ENST00000482646	TRIM28	Q13263	835 aa	Known RBP	27.84	■■■□□ 2.05
CREM-233	ENST00000482646	PARP10	Q53GL7	1025 aa		27.84	■■■□□ 2.05
CREM-233	ENST00000482646	DALRD3	Q5D0E6	543 aa	Known RBP	27.84	■■■□□ 2.05
CREM-233	ENST00000482646	TBC1D9B	Q66K14	1250 aa		27.84	■■■□□ 2.05
CREM-233	ENST00000482646	CCDC191	Q8NCU4	936 aa		27.84	■■■□□ 2.05
CREM-233	ENST00000482646	CWC25	Q9NXE8	425 aa	Predicted RBP	27.84	■■■□□ 2.05
CREM-233	ENST00000482646	COG6	Q9Y2V7	657 aa		27.84	■■■□□ 2.05
CREM-233	ENST00000482646	NEFL	P07196	543 aa		27.83	■■■□□ 2.05
CREM-233	ENST00000482646	LAMB2	P55268	1798 aa		27.82	■■■□□ 2.04
CREM-233	ENST00000482646	DDX19B	Q9UMR2	479 aa		27.82	■■■□□ 2.04
CREM-233	ENST00000482646	UBN2	Q6ZU65	1347 aa		27.82	■■■□□ 2.04
CREM-233	ENST00000482646	CARMIL3	Q8ND23	1372 aa		27.82	■■■□□ 2.04
CREM-233	ENST00000482646	BICDL1	Q6ZP65	573 aa		27.81	■■■□□ 2.04
CREM-233	ENST00000482646	NLRP10	Q86W26	655 aa		27.81	■■■□□ 2.04
CREM-233	ENST00000482646	SETDB2	Q96T68	719 aa		27.81	■■■□□ 2.04
CREM-233	ENST00000482646	GCKR	Q14397	625 aa		27.8	■■■□□ 2.04
CREM-233	ENST00000482646	NFIX	Q14938	502 aa		27.8	■■■□□ 2.04
CREM-233	ENST00000482646	ARFGEF1	Q9Y6D6	1849 aa		27.8	■■■□□ 2.04
CREM-233	ENST00000482646	CHRNA5	P30532	468 aa		27.79	■■■□□ 2.04
CREM-233	ENST00000482646	CHMP4B	Q9H444	224 aa	Known RBP	27.79	■■■□□ 2.04
CREM-233	ENST00000482646	NRXN2	Q9P2S2	1712 aa		27.78	■■■□□ 2.04
CREM-233	ENST00000482646	KIF3C	O14782	793 aa		27.78	■■■□□ 2.04
CREM-233	ENST00000482646	PPP1R42	Q7Z4L9	355 aa		27.78	■■■□□ 2.04
CREM-233	ENST00000482646	CRBN	Q96SW2	442 aa		27.78	■■■□□ 2.04
CREM-233	ENST00000482646	C9orf78	Q9NZ63	289 aa	Predicted RBP	27.78	■■■□□ 2.04
CREM-233	ENST00000482646	MYH3	P11055	1940 aa		27.78	■■■□□ 2.04
CREM-233	ENST00000482646	GRM8	O00222	908 aa		27.77	■■■□□ 2.04
CREM-233	ENST00000482646	HSPA6	P17066	643 aa		27.77	■■■□□ 2.04
CREM-233	ENST00000482646	IRX6	P78412	446 aa	Predicted RBP	27.77	■■■□□ 2.04
CREM-233	ENST00000482646	C9orf131	Q5VYM1	1079 aa		27.76	■■■□□ 2.03
CREM-233	ENST00000482646	UTP14A	Q9BVJ6	771 aa	Known RBP	27.76	■■■□□ 2.03
CREM-233	ENST00000482646	NYX	Q9GZU5	481 aa		27.76	■■■□□ 2.03
CREM-233	ENST00000482646	DDX60	Q8IY21	1712 aa	Known RBP	27.75	■■■□□ 2.03
CREM-233	ENST00000482646	SERPINB2	P05120	415 aa		27.75	■■■□□ 2.03
CREM-233	ENST00000482646	SUSD4	Q5VX71	490 aa		27.75	■■■□□ 2.03
CREM-233	ENST00000482646	PCCA	P05165	728 aa	Predicted RBP	27.74	■■■□□ 2.03
CREM-233	ENST00000482646	GNAI3	P08754	354 aa		27.74	■■■□□ 2.03
CREM-233	ENST00000482646	MEIS3	Q99687	375 aa		27.74	■■■□□ 2.03
CREM-233	ENST00000482646	TRMT112	Q9UI30	125 aa	Known RBP	27.74	■■■□□ 2.03
CREM-233	ENST00000482646	UTY	O14607	1347 aa		27.73	■■■□□ 2.03
CREM-233	ENST00000482646	FAM177B	A6PVY3	158 aa		27.73	■■■□□ 2.03
CREM-233	ENST00000482646	NTSR2	O95665	410 aa		27.73	■■■□□ 2.03
CREM-233	ENST00000482646	UBTFL1	P0CB47	393 aa	Predicted RBP	27.73	■■■□□ 2.03
CREM-233	ENST00000482646	NBPF5P	Q86XG9	351 aa	Predicted RBP	27.73	■■■□□ 2.03
CREM-233	ENST00000482646	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	27.73	■■■□□ 2.03
CREM-233	ENST00000482646	USP44	Q9H0E7	712 aa		27.73	■■■□□ 2.03
CREM-233	ENST00000482646	SH3TC1	Q8TE82	1336 aa		27.72	■■■□□ 2.03
CREM-233	ENST00000482646	ZBTB7B	O15156	539 aa	Predicted RBP	27.72	■■■□□ 2.03
CREM-233	ENST00000482646	UBE3B	Q7Z3V4	1068 aa		27.72	■■■□□ 2.03
CREM-233	ENST00000482646	HDAC5	Q9UQL6	1122 aa		27.72	■■■□□ 2.03
CREM-233	ENST00000482646		H7C1W4	665 aa		27.71	■■■□□ 2.03
CREM-233	ENST00000482646	NPHP1	O15259	732 aa		27.71	■■■□□ 2.03
CREM-233	ENST00000482646	RNF181	Q9P0P0	153 aa		27.71	■■■□□ 2.03
CREM-233	ENST00000482646	CDHR2	Q9BYE9	1310 aa		27.7	■■■□□ 2.03
CREM-233	ENST00000482646	TOMM70	O94826	608 aa		27.7	■■■□□ 2.02
CREM-233	ENST00000482646	TPTE2	Q6XPS3	522 aa		27.7	■■■□□ 2.02
CREM-233	ENST00000482646	CNBD1	Q8NA66	436 aa		27.7	■■■□□ 2.02
CREM-233	ENST00000482646	CEP350	Q5VT06	3117 aa		27.7	■■■□□ 2.02
CREM-233	ENST00000482646	NBPF7	P0C2Y1	421 aa	Predicted RBP	27.69	■■■□□ 2.02
CREM-233	ENST00000482646	GTF2E1	P29083	439 aa	Predicted RBP	27.69	■■■□□ 2.02
CREM-233	ENST00000482646	EXOC6	Q8TAG9	804 aa		27.69	■■■□□ 2.02
CREM-233	ENST00000482646	FAM89A	Q96GI7	184 aa		27.69	■■■□□ 2.02
CREM-233	ENST00000482646	HSP90B1	P14625	803 aa	Known RBP	27.68	■■■□□ 2.02
CREM-233	ENST00000482646	CASP7	P55210	303 aa		27.68	■■■□□ 2.02
CREM-233	ENST00000482646	AAMP	Q13685	434 aa		27.68	■■■□□ 2.02

Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms