RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 WDR33Q9C0J8 1336 aaKnown RBP17.92■□□□□ 0.46
ATG4B-220ENST00000482507 MSNP26038 577 aaKnown RBP17.92■□□□□ 0.46
ATG4B-220ENST00000482507 SLC39A6Q13433 755 aa17.92■□□□□ 0.46
ATG4B-220ENST00000482507 EXOC5O00471 708 aa17.91■□□□□ 0.46
ATG4B-220ENST00000482507 OFD1O75665 1012 aa17.91■□□□□ 0.46
ATG4B-220ENST00000482507 CWF19L2Q2TBE0 894 aaKnown RBP17.91■□□□□ 0.46
ATG4B-220ENST00000482507 PCDH11XQ9BZA7 1347 aa17.91■□□□□ 0.46
ATG4B-220ENST00000482507 PCDH11YQ9BZA8 1340 aa17.91■□□□□ 0.46
ATG4B-220ENST00000482507 PLCH1Q4KWH8 1693 aa17.91■□□□□ 0.46
ATG4B-220ENST00000482507 KDM6AO15550 1401 aaPredicted RBP17.91■□□□□ 0.46
ATG4B-220ENST00000482507 OS9Q13438 667 aaPredicted RBP17.91■□□□□ 0.46
ATG4B-220ENST00000482507 DCAF5Q96JK2 942 aa17.91■□□□□ 0.46
ATG4B-220ENST00000482507 DBF4Q9UBU7 674 aaPredicted RBP17.91■□□□□ 0.46
ATG4B-220ENST00000482507 TTC41PQ6P2S7 1318 aa17.91■□□□□ 0.46
ATG4B-220ENST00000482507 A0A0G2JS52 829 aa17.9■□□□□ 0.46
ATG4B-220ENST00000482507 GIGYF1O75420 1035 aaPredicted RBP17.9■□□□□ 0.46
ATG4B-220ENST00000482507 GLRX3O76003 335 aaKnown RBP17.9■□□□□ 0.46
ATG4B-220ENST00000482507 ADCK5Q3MIX3 580 aa17.9■□□□□ 0.46
ATG4B-220ENST00000482507 HSP90AB4PQ58FF6 505 aa17.9■□□□□ 0.46
ATG4B-220ENST00000482507 KIAA1211Q6ZU35 1233 aa17.9■□□□□ 0.46
ATG4B-220ENST00000482507 CNPY2Q9Y2B0 182 aa17.9■□□□□ 0.46
ATG4B-220ENST00000482507 VPS72Q15906 364 aa17.89■□□□□ 0.45
ATG4B-220ENST00000482507 KAZALD1Q96I82 304 aa17.89■□□□□ 0.45
ATG4B-220ENST00000482507 TSPY26PQ9H489 355 aa17.89■□□□□ 0.45
ATG4B-220ENST00000482507 LIMCH1Q9UPQ0 1083 aa17.89■□□□□ 0.45
ATG4B-220ENST00000482507 TCHHQ07283 1943 aa17.89■□□□□ 0.45
ATG4B-220ENST00000482507 HEG1Q9ULI3 1381 aa17.89■□□□□ 0.45
ATG4B-220ENST00000482507 CASTP20810 708 aaKnown RBP17.89■□□□□ 0.45
ATG4B-220ENST00000482507 SYT1P21579 422 aa17.89■□□□□ 0.45
ATG4B-220ENST00000482507 SLC52A2Q9HAB3 445 aa17.89■□□□□ 0.45
ATG4B-220ENST00000482507 CABP4P57796 275 aa17.88■□□□□ 0.45
ATG4B-220ENST00000482507 TMEM87AQ8NBN3 555 aa17.88■□□□□ 0.45
ATG4B-220ENST00000482507 ECHDC1Q9NTX5 307 aa17.88■□□□□ 0.45
ATG4B-220ENST00000482507 HYPKQ9NX55 129 aa17.88■□□□□ 0.45
ATG4B-220ENST00000482507 C9orf78Q9NZ63 289 aaPredicted RBP17.88■□□□□ 0.45
ATG4B-220ENST00000482507 ZSCAN22P10073 491 aaPredicted RBP17.88■□□□□ 0.45
ATG4B-220ENST00000482507 COL9A3Q14050 684 aaPredicted RBP17.88■□□□□ 0.45
ATG4B-220ENST00000482507 DDB1Q16531 1140 aa17.88■□□□□ 0.45
ATG4B-220ENST00000482507 KSR2Q6VAB6 950 aa17.88■□□□□ 0.45
ATG4B-220ENST00000482507 CLASRPQ8N2M8 674 aaKnown RBP17.88■□□□□ 0.45
ATG4B-220ENST00000482507 DIAPH3Q9NSV4 1193 aa17.88■□□□□ 0.45
ATG4B-220ENST00000482507 ZNF500O60304 480 aaPredicted RBP17.87■□□□□ 0.45
ATG4B-220ENST00000482507 ALDH1L1O75891 902 aa17.87■□□□□ 0.45
ATG4B-220ENST00000482507 DISP2A7MBM2 1401 aa17.87■□□□□ 0.45
ATG4B-220ENST00000482507 STX6O43752 255 aa17.87■□□□□ 0.45
ATG4B-220ENST00000482507 ST3GAL1Q11201 340 aa17.87■□□□□ 0.45
ATG4B-220ENST00000482507 PRPF40BQ6NWY9 871 aaKnown RBP17.87■□□□□ 0.45
ATG4B-220ENST00000482507 SUCLG2Q96I99 432 aa17.87■□□□□ 0.45
ATG4B-220ENST00000482507 ZKSCAN5Q9Y2L8 839 aa17.87■□□□□ 0.45
ATG4B-220ENST00000482507 THRAP3Q9Y2W1 955 aaKnown RBP17.87■□□□□ 0.45
ATG4B-220ENST00000482507 TPRNQ4KMQ1 711 aa17.86■□□□□ 0.45
ATG4B-220ENST00000482507 SASH1O94885 1247 aa17.86■□□□□ 0.45
ATG4B-220ENST00000482507 FAM182BQ5T319 152 aa17.86■□□□□ 0.45
ATG4B-220ENST00000482507 JAKMIP1Q96N16 626 aaKnown RBP17.86■□□□□ 0.45
ATG4B-220ENST00000482507 AACSQ86V21 672 aa17.85■□□□□ 0.45
ATG4B-220ENST00000482507 UBE2Q2Q8WVN8 375 aa17.85■□□□□ 0.45
ATG4B-220ENST00000482507 KCNB2Q92953 911 aa17.85■□□□□ 0.45
ATG4B-220ENST00000482507 SYAP1Q96A49 352 aaPredicted RBP17.85■□□□□ 0.45
ATG4B-220ENST00000482507 SYTL4Q96C24 671 aaPredicted RBP17.85■□□□□ 0.45
ATG4B-220ENST00000482507 CHMP4AQ9BY43 222 aa17.85■□□□□ 0.45
ATG4B-220ENST00000482507 IFIT2P09913 472 aaKnown RBP17.84■□□□□ 0.45
ATG4B-220ENST00000482507 CCDC83Q8IWF9 413 aa17.84■□□□□ 0.45
ATG4B-220ENST00000482507 MARCH10Q8NA82 808 aaPredicted RBP17.84■□□□□ 0.45
ATG4B-220ENST00000482507 QTRT2Q9H974 415 aaKnown RBP17.84■□□□□ 0.45
ATG4B-220ENST00000482507 NRAPQ86VF7 1730 aa17.84■□□□□ 0.45
ATG4B-220ENST00000482507 F13A1P00488 732 aa17.84■□□□□ 0.45
ATG4B-220ENST00000482507 NECTIN1Q15223 517 aa17.84■□□□□ 0.45
ATG4B-220ENST00000482507 NKX1-1Q15270 411 aaPredicted RBP17.84■□□□□ 0.45
ATG4B-220ENST00000482507 BARGINQ6ZT62 677 aa17.84■□□□□ 0.45
ATG4B-220ENST00000482507 EAF2Q96CJ1 260 aaPredicted RBP17.84■□□□□ 0.45
ATG4B-220ENST00000482507 GJD4Q96KN9 370 aaPredicted RBP17.84■□□□□ 0.45
ATG4B-220ENST00000482507 FAM227BQ96M60 508 aa17.84■□□□□ 0.45
ATG4B-220ENST00000482507 BICC1Q9H694 974 aaKnown RBP17.84■□□□□ 0.45
ATG4B-220ENST00000482507 TLR7Q9NYK1 1049 aaKnown RBP17.84■□□□□ 0.45
ATG4B-220ENST00000482507 SMC3Q9UQE7 1217 aa17.84■□□□□ 0.45
ATG4B-220ENST00000482507 TPM2P07951 284 aa17.83■□□□□ 0.45
ATG4B-220ENST00000482507 PDIA6Q15084 440 aa17.83■□□□□ 0.45
ATG4B-220ENST00000482507 ZSWIM6Q9HCJ5 1215 aa17.83■□□□□ 0.45
ATG4B-220ENST00000482507 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.83■□□□□ 0.45
ATG4B-220ENST00000482507 ZNF790Q6PG37 636 aa17.83■□□□□ 0.44
ATG4B-220ENST00000482507 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.83■□□□□ 0.44
ATG4B-220ENST00000482507 ACSBG1Q96GR2 724 aa17.83■□□□□ 0.44
ATG4B-220ENST00000482507 PDRG1Q9NUG6 133 aa17.83■□□□□ 0.44
ATG4B-220ENST00000482507 GRM8O00222 908 aa17.82■□□□□ 0.44
ATG4B-220ENST00000482507 GJB2P29033 226 aa17.82■□□□□ 0.44
ATG4B-220ENST00000482507 AIMP1Q12904 312 aaKnown RBP17.82■□□□□ 0.44
ATG4B-220ENST00000482507 VPS53Q5VIR6 699 aa17.82■□□□□ 0.44
ATG4B-220ENST00000482507 FBXO41Q8TF61 875 aa17.82■□□□□ 0.44
ATG4B-220ENST00000482507 RUFY2Q8WXA3 655 aa17.82■□□□□ 0.44
ATG4B-220ENST00000482507 CCDC8Q9H0W5 538 aaPredicted RBP17.82■□□□□ 0.44
ATG4B-220ENST00000482507 UTYO14607 1347 aa17.82■□□□□ 0.44
ATG4B-220ENST00000482507 CCDC171Q6TFL3 1326 aa17.82■□□□□ 0.44
ATG4B-220ENST00000482507 LINS1Q8NG48 757 aa17.82■□□□□ 0.44
ATG4B-220ENST00000482507 EVI5LQ96CN4 794 aa17.82■□□□□ 0.44
ATG4B-220ENST00000482507 CCDC39Q9UFE4 941 aa17.82■□□□□ 0.44
ATG4B-220ENST00000482507 FIBPO43427 364 aa17.81■□□□□ 0.44
ATG4B-220ENST00000482507 IGKV5-2P06315 115 aa17.81■□□□□ 0.44
ATG4B-220ENST00000482507 NMIQ13287 307 aaPredicted RBP17.81■□□□□ 0.44
ATG4B-220ENST00000482507 ME3Q16798 604 aa17.81■□□□□ 0.44
ATG4B-220ENST00000482507 ERC1Q8IUD2 1116 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms