RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 RFX5P48382 616 aaPredicted RBP17.61■□□□□ 0.41
CHD3-211ENST00000481999 PTPN12Q05209 780 aaKnown RBP17.61■□□□□ 0.41
CHD3-211ENST00000481999 IFIT2P09913 472 aaKnown RBP17.61■□□□□ 0.41
CHD3-211ENST00000481999 HSP90AB4PQ58FF6 505 aa17.61■□□□□ 0.41
CHD3-211ENST00000481999 ZBTB1Q9Y2K1 713 aa17.61■□□□□ 0.41
CHD3-211ENST00000481999 DDB1Q16531 1140 aa17.6■□□□□ 0.41
CHD3-211ENST00000481999 HLFQ16534 295 aa17.6■□□□□ 0.41
CHD3-211ENST00000481999 MARCH10Q8NA82 808 aaPredicted RBP17.6■□□□□ 0.41
CHD3-211ENST00000481999 NUP188Q5SRE5 1749 aa17.6■□□□□ 0.41
CHD3-211ENST00000481999 GPTP24298 496 aa17.6■□□□□ 0.41
CHD3-211ENST00000481999 EDC3Q96F86 508 aaKnown RBP17.6■□□□□ 0.41
CHD3-211ENST00000481999 ZNF594Q96JF6 807 aaPredicted RBP17.6■□□□□ 0.41
CHD3-211ENST00000481999 TRAK2O60296 914 aa17.59■□□□□ 0.41
CHD3-211ENST00000481999 FOXO4P98177 505 aa17.59■□□□□ 0.41
CHD3-211ENST00000481999 CWC27Q6UX04 472 aaKnown RBP17.59■□□□□ 0.41
CHD3-211ENST00000481999 CWC25Q9NXE8 425 aaPredicted RBP17.59■□□□□ 0.41
CHD3-211ENST00000481999 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.59■□□□□ 0.41
CHD3-211ENST00000481999 REC8O95072 547 aa17.59■□□□□ 0.41
CHD3-211ENST00000481999 TFCP2Q12800 502 aa17.59■□□□□ 0.41
CHD3-211ENST00000481999 FAM89AQ96GI7 184 aa17.59■□□□□ 0.41
CHD3-211ENST00000481999 AK9Q5TCS8 1911 aa17.59■□□□□ 0.41
CHD3-211ENST00000481999 ERBB4Q15303 1308 aa17.58■□□□□ 0.41
CHD3-211ENST00000481999 KCNQ2O43526 872 aa17.58■□□□□ 0.41
CHD3-211ENST00000481999 NGLY1Q96IV0 654 aa17.58■□□□□ 0.41
CHD3-211ENST00000481999 DOT1LQ8TEK3 1739 aa17.58■□□□□ 0.4
CHD3-211ENST00000481999 H7C1W4 665 aa17.58■□□□□ 0.4
CHD3-211ENST00000481999 K7ELQ4 463 aaPredicted RBP17.58■□□□□ 0.4
CHD3-211ENST00000481999 CHGBP05060 677 aa17.58■□□□□ 0.4
CHD3-211ENST00000481999 KCNQ4P56696 695 aa17.58■□□□□ 0.4
CHD3-211ENST00000481999 FAM98CQ17RN3 349 aaKnown RBP17.58■□□□□ 0.4
CHD3-211ENST00000481999 RABL6Q3YEC7 729 aaPredicted RBP17.58■□□□□ 0.4
CHD3-211ENST00000481999 BOLA2Q9H3K6 86 aa17.58■□□□□ 0.4
CHD3-211ENST00000481999 ECHDC1Q9NTX5 307 aa17.58■□□□□ 0.4
CHD3-211ENST00000481999 TBC1D2BQ9UPU7 963 aa17.57■□□□□ 0.4
CHD3-211ENST00000481999 TJP1Q07157 1748 aa17.57■□□□□ 0.4
CHD3-211ENST00000481999 NRAPQ86VF7 1730 aa17.57■□□□□ 0.4
CHD3-211ENST00000481999 GOLGA6L3A6NEY3 463 aa17.57■□□□□ 0.4
CHD3-211ENST00000481999 HSP90AA1P07900 732 aaKnown RBP17.57■□□□□ 0.4
CHD3-211ENST00000481999 CYP19A1P11511 503 aaPredicted RBP17.57■□□□□ 0.4
CHD3-211ENST00000481999 FAM182BQ5T319 152 aa17.56■□□□□ 0.4
CHD3-211ENST00000481999 PTF1AQ7RTS3 328 aa17.56■□□□□ 0.4
CHD3-211ENST00000481999 HDAC5Q9UQL6 1122 aa17.56■□□□□ 0.4
CHD3-211ENST00000481999 AOX1Q06278 1338 aa17.56■□□□□ 0.4
CHD3-211ENST00000481999 FSD2A1L4K1 749 aa17.56■□□□□ 0.4
CHD3-211ENST00000481999 STARD3NLO95772 234 aa17.56■□□□□ 0.4
CHD3-211ENST00000481999 ERC1Q8IUD2 1116 aa17.56■□□□□ 0.4
CHD3-211ENST00000481999 SPATA31A5Q5VU36 1347 aa17.56■□□□□ 0.4
CHD3-211ENST00000481999 SPATA31A7Q8IWB4 1347 aa17.56■□□□□ 0.4
CHD3-211ENST00000481999 GLRX3O76003 335 aaKnown RBP17.55■□□□□ 0.4
CHD3-211ENST00000481999 NOL8Q76FK4 1167 aaKnown RBP17.55■□□□□ 0.4
CHD3-211ENST00000481999 GBP4Q96PP9 640 aa17.55■□□□□ 0.4
CHD3-211ENST00000481999 COPRSQ9NQ92 184 aa17.55■□□□□ 0.4
CHD3-211ENST00000481999 DBNLQ9UJU6 430 aaKnown RBP17.55■□□□□ 0.4
CHD3-211ENST00000481999 WNK3Q9BYP7 1800 aa17.55■□□□□ 0.4
CHD3-211ENST00000481999 RAB3GAP1Q15042 981 aa17.55■□□□□ 0.4
CHD3-211ENST00000481999 LRRC24Q50LG9 513 aa17.55■□□□□ 0.4
CHD3-211ENST00000481999 CNTROBQ8N137 903 aa17.55■□□□□ 0.4
CHD3-211ENST00000481999 AFF2P51816 1311 aa17.55■□□□□ 0.4
CHD3-211ENST00000481999 TNPO1Q92973 898 aaKnown RBP17.54■□□□□ 0.4
CHD3-211ENST00000481999 PUS3Q9BZE2 481 aaKnown RBP17.54■□□□□ 0.4
CHD3-211ENST00000481999 TTC41PQ6P2S7 1318 aa17.54■□□□□ 0.4
CHD3-211ENST00000481999 USP42Q9H9J4 1324 aaKnown RBP17.54■□□□□ 0.4
CHD3-211ENST00000481999 SLIT2O94813 1529 aa17.54■□□□□ 0.4
CHD3-211ENST00000481999 TCIRG1Q13488 830 aa17.54■□□□□ 0.4
CHD3-211ENST00000481999 RABEP1Q15276 862 aa17.54■□□□□ 0.4
CHD3-211ENST00000481999 SMIM5Q71RC9 77 aa17.54■□□□□ 0.4
CHD3-211ENST00000481999 FAM43AQ8N2R8 423 aa17.54■□□□□ 0.4
CHD3-211ENST00000481999 CCDC191Q8NCU4 936 aa17.54■□□□□ 0.4
CHD3-211ENST00000481999 UPF3BQ9BZI7 483 aaKnown RBP17.54■□□□□ 0.4
CHD3-211ENST00000481999 GZF1Q9H116 711 aaPredicted RBP17.54■□□□□ 0.4
CHD3-211ENST00000481999 PTMSP20962 102 aa17.53■□□□□ 0.4
CHD3-211ENST00000481999 VSIG10Q8N0Z9 540 aa17.53■□□□□ 0.4
CHD3-211ENST00000481999 FNBP4Q8N3X1 1017 aaPredicted RBP17.53■□□□□ 0.4
CHD3-211ENST00000481999 DBNDD2Q9BQY9 259 aa17.53■□□□□ 0.4
CHD3-211ENST00000481999 ISCA1Q9BUE6 129 aa17.53■□□□□ 0.4
CHD3-211ENST00000481999 FAM227BQ96M60 508 aa17.53■□□□□ 0.4
CHD3-211ENST00000481999 TNNI3KQ59H18 835 aa17.52■□□□□ 0.4
CHD3-211ENST00000481999 KIF6Q6ZMV9 814 aa17.52■□□□□ 0.4
CHD3-211ENST00000481999 FPGT-TNNI3KV9GXZ4 949 aa17.52■□□□□ 0.4
CHD3-211ENST00000481999 FAM177BA6PVY3 158 aa17.52■□□□□ 0.39
CHD3-211ENST00000481999 SGSM2O43147 1006 aa17.52■□□□□ 0.39
CHD3-211ENST00000481999 ATG9AQ7Z3C6 839 aa17.52■□□□□ 0.39
CHD3-211ENST00000481999 NEK4P51957 841 aa17.51■□□□□ 0.39
CHD3-211ENST00000481999 TIMM10P62072 90 aa17.51■□□□□ 0.39
CHD3-211ENST00000481999 BCL9LQ86UU0 1499 aa17.51■□□□□ 0.39
CHD3-211ENST00000481999 USP21Q9UK80 565 aa17.51■□□□□ 0.39
CHD3-211ENST00000481999 MAP3K15Q6ZN16 1313 aa17.51■□□□□ 0.39
CHD3-211ENST00000481999 ATP6V1AP38606 617 aa17.51■□□□□ 0.39
CHD3-211ENST00000481999 ITPK1Q13572 414 aa17.51■□□□□ 0.39
CHD3-211ENST00000481999 PTH1RQ03431 593 aa17.5■□□□□ 0.39
CHD3-211ENST00000481999 SLFNL1Q499Z3 407 aa17.5■□□□□ 0.39
CHD3-211ENST00000481999 ISY1Q9ULR0 285 aaKnown RBP17.5■□□□□ 0.39
CHD3-211ENST00000481999 XRCC6P12956 609 aaKnown RBP eCLIP17.5■□□□□ 0.39
CHD3-211ENST00000481999 SKOR2Q2VWA4 1001 aaPredicted RBP17.5■□□□□ 0.39
CHD3-211ENST00000481999 ZGPATQ8N5A5 531 aaKnown RBP17.5■□□□□ 0.39
CHD3-211ENST00000481999 LARP6Q9BRS8 491 aaKnown RBP17.5■□□□□ 0.39
CHD3-211ENST00000481999 TEX13AQ9BXU3 409 aaPredicted RBP17.5■□□□□ 0.39
CHD3-211ENST00000481999 DIAPH3Q9NSV4 1193 aa17.5■□□□□ 0.39
CHD3-211ENST00000481999 COL9A3Q14050 684 aaPredicted RBP17.49■□□□□ 0.39
CHD3-211ENST00000481999 GIGYF2Q6Y7W6 1299 aaKnown RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms