RNA–Protein interactions for RNA: ENST00000481453.5

MRPL28-209, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 2

Gene MRPL28, Length 2,229 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-209ENST00000481453 THRAP3Q9Y2W1 955 aaKnown RBP22.42■■□□□ 1.18
MRPL28-209ENST00000481453 G3BP1Q13283 466 aaKnown RBP eCLIP22.41■■□□□ 1.185e-9■□□□□ 10.7
MRPL28-209ENST00000481453 MAP4K4O95819 1239 aaPredicted RBP22.41■■□□□ 1.18
MRPL28-209ENST00000481453 SIL1Q9H173 461 aa22.41■■□□□ 1.18
MRPL28-209ENST00000481453 COPRSQ9NQ92 184 aa22.41■■□□□ 1.18
MRPL28-209ENST00000481453 CWC25Q9NXE8 425 aaPredicted RBP22.41■■□□□ 1.18
MRPL28-209ENST00000481453 SPATA31A5Q5VU36 1347 aa22.4■■□□□ 1.18
MRPL28-209ENST00000481453 SPATA31A7Q8IWB4 1347 aa22.4■■□□□ 1.18
MRPL28-209ENST00000481453 RABEP1Q15276 862 aa22.4■■□□□ 1.18
MRPL28-209ENST00000481453 FOXO4P98177 505 aa22.39■■□□□ 1.18
MRPL28-209ENST00000481453 EAF2Q96CJ1 260 aaPredicted RBP22.39■■□□□ 1.18
MRPL28-209ENST00000481453 PTPN12Q05209 780 aaKnown RBP22.39■■□□□ 1.17
MRPL28-209ENST00000481453 AACSQ86V21 672 aa22.39■■□□□ 1.17
MRPL28-209ENST00000481453 GLRX3O76003 335 aaKnown RBP22.38■■□□□ 1.17
MRPL28-209ENST00000481453 CCDC191Q8NCU4 936 aa22.38■■□□□ 1.17
MRPL28-209ENST00000481453 ISCA1Q9BUE6 129 aa22.38■■□□□ 1.17
MRPL28-209ENST00000481453 IL25Q9H293 177 aa22.38■■□□□ 1.17
MRPL28-209ENST00000481453 ECHDC1Q9NTX5 307 aa22.38■■□□□ 1.17
MRPL28-209ENST00000481453 IFIT2P09913 472 aaKnown RBP22.38■■□□□ 1.17
MRPL28-209ENST00000481453 PRIM1P49642 420 aaKnown RBP22.38■■□□□ 1.17
MRPL28-209ENST00000481453 ANO8Q9HCE9 1232 aaPredicted RBP22.38■■□□□ 1.17
MRPL28-209ENST00000481453 STARD3NLO95772 234 aa22.37■■□□□ 1.17
MRPL28-209ENST00000481453 PTMSP20962 102 aa22.37■■□□□ 1.17
MRPL28-209ENST00000481453 MRE11P49959 708 aa22.37■■□□□ 1.17
MRPL28-209ENST00000481453 CYP19A1P11511 503 aaPredicted RBP22.37■■□□□ 1.17
MRPL28-209ENST00000481453 DDB1Q16531 1140 aa22.37■■□□□ 1.17
MRPL28-209ENST00000481453 SYTL4Q96C24 671 aaPredicted RBP22.36■■□□□ 1.17
MRPL28-209ENST00000481453 PANK2Q9BZ23 570 aa22.36■■□□□ 1.17
MRPL28-209ENST00000481453 TLR7Q9NYK1 1049 aaKnown RBP22.36■■□□□ 1.17
MRPL28-209ENST00000481453 SKOR2Q2VWA4 1001 aaPredicted RBP22.35■■□□□ 1.17
MRPL28-209ENST00000481453 LMBR1LQ6UX01 489 aa22.35■■□□□ 1.17
MRPL28-209ENST00000481453 CNTROBQ8N137 903 aa22.35■■□□□ 1.17
MRPL28-209ENST00000481453 MARCH10Q8NA82 808 aaPredicted RBP22.35■■□□□ 1.17
MRPL28-209ENST00000481453 TCIRG1Q13488 830 aa22.35■■□□□ 1.17
MRPL28-209ENST00000481453 KAT6BQ8WYB5 2073 aa22.35■■□□□ 1.17
MRPL28-209ENST00000481453 BARGINQ6ZT62 677 aa22.34■■□□□ 1.17
MRPL28-209ENST00000481453 GPATCH3Q96I76 525 aa22.34■■□□□ 1.17
MRPL28-209ENST00000481453 CCDC8Q9H0W5 538 aaPredicted RBP22.34■■□□□ 1.17
MRPL28-209ENST00000481453 ZNF330Q9Y3S2 320 aaPredicted RBP22.34■■□□□ 1.17
MRPL28-209ENST00000481453 SSFA2P28290 1259 aa22.34■■□□□ 1.17
MRPL28-209ENST00000481453 ISY1Q9ULR0 285 aaKnown RBP22.34■■□□□ 1.17
MRPL28-209ENST00000481453 UBAP1LF5GYI3 381 aa22.33■■□□□ 1.17
MRPL28-209ENST00000481453 TRIM28Q13263 835 aaKnown RBP22.33■■□□□ 1.16
MRPL28-209ENST00000481453 KIF6Q6ZMV9 814 aa22.32■■□□□ 1.16
MRPL28-209ENST00000481453 GRPEL1Q9HAV7 217 aa22.32■■□□□ 1.16
MRPL28-209ENST00000481453 ANO2Q9NQ90 1003 aa22.32■■□□□ 1.16
MRPL28-209ENST00000481453 MAP3K15Q6ZN16 1313 aa22.32■■□□□ 1.16
MRPL28-209ENST00000481453 ZBTB1Q9Y2K1 713 aa22.31■■□□□ 1.16
MRPL28-209ENST00000481453 SGSM2O43147 1006 aa22.31■■□□□ 1.16
MRPL28-209ENST00000481453 GOLGA6L22H0YM25 854 aa22.3■■□□□ 1.16
MRPL28-209ENST00000481453 TFCP2Q12800 502 aa22.3■■□□□ 1.16
MRPL28-209ENST00000481453 PALD1Q9ULE6 856 aa22.3■■□□□ 1.16
MRPL28-209ENST00000481453 BCL9LQ86UU0 1499 aa22.3■■□□□ 1.16
MRPL28-209ENST00000481453 ANKRD36CQ5JPF3 1778 aa22.29■■□□□ 1.16
MRPL28-209ENST00000481453 IL17RAQ96F46 866 aa22.29■■□□□ 1.16
MRPL28-209ENST00000481453 ACSBG1Q96GR2 724 aa22.29■■□□□ 1.16
MRPL28-209ENST00000481453 RRAGDQ9NQL2 400 aaPredicted RBP22.29■■□□□ 1.16
MRPL28-209ENST00000481453 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.29■■□□□ 1.16
MRPL28-209ENST00000481453 CCDC9Q9Y3X0 531 aaKnown RBP22.29■■□□□ 1.16
MRPL28-209ENST00000481453 EPB41L2O43491 1005 aaKnown RBP22.29■■□□□ 1.16
MRPL28-209ENST00000481453 HLFQ16534 295 aa22.29■■□□□ 1.16
MRPL28-209ENST00000481453 TNNI3KQ59H18 835 aa22.29■■□□□ 1.16
MRPL28-209ENST00000481453 GIGYF2Q6Y7W6 1299 aaKnown RBP22.29■■□□□ 1.16
MRPL28-209ENST00000481453 CLEC17AQ6ZS10 378 aa22.29■■□□□ 1.16
MRPL28-209ENST00000481453 FPGT-TNNI3KV9GXZ4 949 aa22.29■■□□□ 1.16
MRPL28-209ENST00000481453 CICQ96RK0 1608 aaPredicted RBP22.28■■□□□ 1.16
MRPL28-209ENST00000481453 ST18O60284 1047 aa22.28■■□□□ 1.16
MRPL28-209ENST00000481453 ATG9AQ7Z3C6 839 aa22.28■■□□□ 1.16
MRPL28-209ENST00000481453 JCADQ9P266 1359 aa22.27■■□□□ 1.16
MRPL28-209ENST00000481453 EVI5LQ96CN4 794 aa22.27■■□□□ 1.16
MRPL28-209ENST00000481453 DBNLQ9UJU6 430 aaKnown RBP22.27■■□□□ 1.16
MRPL28-209ENST00000481453 CHMP3Q9Y3E7 222 aa22.27■■□□□ 1.16
MRPL28-209ENST00000481453 RREB1Q92766 1687 aa22.27■■□□□ 1.16
MRPL28-209ENST00000481453 BAG4O95429 457 aaKnown RBP22.26■■□□□ 1.15
MRPL28-209ENST00000481453 PCCAP05165 728 aaPredicted RBP22.26■■□□□ 1.15
MRPL28-209ENST00000481453 LSG1Q9H089 658 aaKnown RBP22.26■■□□□ 1.15
MRPL28-209ENST00000481453 ANAPC15P60006 121 aa22.26■■□□□ 1.15
MRPL28-209ENST00000481453 NUCB2P80303 420 aa22.26■■□□□ 1.15
MRPL28-209ENST00000481453 RAD50Q92878 1312 aa22.25■■□□□ 1.15
MRPL28-209ENST00000481453 CWC27Q6UX04 472 aaKnown RBP22.25■■□□□ 1.15
MRPL28-209ENST00000481453 NUP98P52948 1817 aa22.25■■□□□ 1.15
MRPL28-209ENST00000481453 MCCP23508 829 aa22.25■■□□□ 1.15
MRPL28-209ENST00000481453 IL6STP40189 918 aaPredicted RBP22.25■■□□□ 1.15
MRPL28-209ENST00000481453 ZBTB38Q8NAP3 1195 aaPredicted RBP22.25■■□□□ 1.15
MRPL28-209ENST00000481453 BOLA2Q9H3K6 86 aa22.25■■□□□ 1.15
MRPL28-209ENST00000481453 C8orf37Q96NL8 207 aa22.24■■□□□ 1.15
MRPL28-209ENST00000481453 PLA2G12BQ9BX93 195 aa22.24■■□□□ 1.15
MRPL28-209ENST00000481453 HSPA4P34932 840 aa22.23■■□□□ 1.15
MRPL28-209ENST00000481453 VPS72Q15906 364 aa22.23■■□□□ 1.15
MRPL28-209ENST00000481453 NLRP10Q86W26 655 aa22.23■■□□□ 1.15
MRPL28-209ENST00000481453 GAS2L3Q86XJ1 694 aa22.23■■□□□ 1.15
MRPL28-209ENST00000481453 FAM89AQ96GI7 184 aa22.23■■□□□ 1.15
MRPL28-209ENST00000481453 CWC22Q9HCG8 908 aaKnown RBP22.23■■□□□ 1.15
MRPL28-209ENST00000481453 INTS5Q6P9B9 1019 aaKnown RBP22.23■■□□□ 1.15
MRPL28-209ENST00000481453 ZNF594Q96JF6 807 aaPredicted RBP22.23■■□□□ 1.15
MRPL28-209ENST00000481453 DIAPH3Q9NSV4 1193 aa22.23■■□□□ 1.15
MRPL28-209ENST00000481453 ATP5JP18859 108 aa22.22■■□□□ 1.15
MRPL28-209ENST00000481453 FAM98CQ17RN3 349 aaKnown RBP22.22■■□□□ 1.15
MRPL28-209ENST00000481453 DBNDD2Q9BQY9 259 aa22.22■■□□□ 1.15
MRPL28-209ENST00000481453 A0A0G2JS52 829 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms