RNA–Protein interactions for RNA: ENST00000481296.1

KDM4A-204, Transcript of lysine demethylase 4A, humanhuman

TSL 2

Gene KDM4A, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4A-204ENST00000481296 CWC25Q9NXE8 425 aaPredicted RBP12.11□□□□□ -0.47
KDM4A-204ENST00000481296 DDX19BQ9UMR2 479 aa12.11□□□□□ -0.47
KDM4A-204ENST00000481296 NIP7Q9Y221 180 aaKnown RBP eCLIP12.11□□□□□ -0.47
KDM4A-204ENST00000481296 R3HDM1Q15032 1099 aaKnown RBP12.1□□□□□ -0.47
KDM4A-204ENST00000481296 ZNF34Q8IZ26 560 aa12.1□□□□□ -0.47
KDM4A-204ENST00000481296 CCDC191Q8NCU4 936 aa12.1□□□□□ -0.47
KDM4A-204ENST00000481296 KIAA1551Q9HCM1 1747 aa12.09□□□□□ -0.47
KDM4A-204ENST00000481296 GCKRQ14397 625 aa12.09□□□□□ -0.47
KDM4A-204ENST00000481296 PARP10Q53GL7 1025 aa12.09□□□□□ -0.47
KDM4A-204ENST00000481296 MSL1Q68DK7 614 aa12.09□□□□□ -0.47
KDM4A-204ENST00000481296 BICDL1Q6ZP65 573 aa12.09□□□□□ -0.47
KDM4A-204ENST00000481296 NLRP10Q86W26 655 aa12.09□□□□□ -0.47
KDM4A-204ENST00000481296 TAF1P21675 1872 aa12.08□□□□□ -0.48
KDM4A-204ENST00000481296 PSDA5PKW4 1024 aaPredicted RBP12.08□□□□□ -0.48
KDM4A-204ENST00000481296 GRM8O00222 908 aa12.08□□□□□ -0.48
KDM4A-204ENST00000481296 SOCS7O14512 581 aa12.08□□□□□ -0.48
KDM4A-204ENST00000481296 TRIM28Q13263 835 aaKnown RBP12.08□□□□□ -0.48
KDM4A-204ENST00000481296 NFIXQ14938 502 aa12.08□□□□□ -0.48
KDM4A-204ENST00000481296 SETDB2Q96T68 719 aa12.08□□□□□ -0.48
KDM4A-204ENST00000481296 MEIS3Q99687 375 aa12.08□□□□□ -0.48
KDM4A-204ENST00000481296 PDGFDQ9GZP0 370 aaPredicted RBP12.08□□□□□ -0.48
KDM4A-204ENST00000481296 C9orf78Q9NZ63 289 aaPredicted RBP12.08□□□□□ -0.48
KDM4A-204ENST00000481296 ABCC12Q96J65 1359 aa12.07□□□□□ -0.48
KDM4A-204ENST00000481296 FAM177BA6PVY3 158 aa12.07□□□□□ -0.48
KDM4A-204ENST00000481296 NTSR2O95665 410 aa12.07□□□□□ -0.48
KDM4A-204ENST00000481296 UBTFL1P0CB47 393 aaPredicted RBP12.07□□□□□ -0.48
KDM4A-204ENST00000481296 BRCA1P38398 1863 aaKnown RBP12.07□□□□□ -0.48
KDM4A-204ENST00000481296 RIC1Q4ADV7 1423 aa12.07□□□□□ -0.48
KDM4A-204ENST00000481296 PPP1R42Q7Z4L9 355 aa12.07□□□□□ -0.48
KDM4A-204ENST00000481296 NLGN1Q8N2Q7 840 aa12.07□□□□□ -0.48
KDM4A-204ENST00000481296 EXOC6Q8TAG9 804 aa12.07□□□□□ -0.48
KDM4A-204ENST00000481296 SLC16A10Q8TF71 515 aa12.07□□□□□ -0.48
KDM4A-204ENST00000481296 CHMP4BQ9H444 224 aaKnown RBP12.07□□□□□ -0.48
KDM4A-204ENST00000481296 LRP5O75197 1615 aa12.07□□□□□ -0.48
KDM4A-204ENST00000481296 UTYO14607 1347 aa12.07□□□□□ -0.48
KDM4A-204ENST00000481296 PCCAP05165 728 aaPredicted RBP12.06□□□□□ -0.48
KDM4A-204ENST00000481296 GNAI3P08754 354 aa12.06□□□□□ -0.48
KDM4A-204ENST00000481296 DDR1Q08345 913 aa12.06□□□□□ -0.48
KDM4A-204ENST00000481296 SUSD4Q5VX71 490 aa12.06□□□□□ -0.48
KDM4A-204ENST00000481296 UBE3BQ7Z3V4 1068 aa12.06□□□□□ -0.48
KDM4A-204ENST00000481296 NBPF5PQ86XG9 351 aaPredicted RBP12.06□□□□□ -0.48
KDM4A-204ENST00000481296 UTP14AQ9BVJ6 771 aaKnown RBP12.06□□□□□ -0.48
KDM4A-204ENST00000481296 NYXQ9GZU5 481 aa12.06□□□□□ -0.48
KDM4A-204ENST00000481296 TRMT112Q9UI30 125 aaKnown RBP12.06□□□□□ -0.48
KDM4A-204ENST00000481296 SH3TC1Q8TE82 1336 aa12.06□□□□□ -0.48
KDM4A-204ENST00000481296 CDHR2Q9BYE9 1310 aa12.06□□□□□ -0.48
KDM4A-204ENST00000481296 POLRMTO00411 1230 aaKnown RBP12.05□□□□□ -0.48
KDM4A-204ENST00000481296 NPHP1O15259 732 aa12.05□□□□□ -0.48
KDM4A-204ENST00000481296 MMP10P09238 476 aa12.05□□□□□ -0.48
KDM4A-204ENST00000481296 NBPF7P0C2Y1 421 aaPredicted RBP12.05□□□□□ -0.48
KDM4A-204ENST00000481296 RTL5Q5HYW3 569 aaPredicted RBP12.05□□□□□ -0.48
KDM4A-204ENST00000481296 CNBD1Q8NA66 436 aa12.05□□□□□ -0.48
KDM4A-204ENST00000481296 ZBTB38Q8NAP3 1195 aaPredicted RBP12.05□□□□□ -0.48
KDM4A-204ENST00000481296 MTFR1LQ9H019 292 aa12.05□□□□□ -0.48
KDM4A-204ENST00000481296 USP44Q9H0E7 712 aa12.05□□□□□ -0.48
KDM4A-204ENST00000481296 LRRC37AA6NMS7 1700 aa12.05□□□□□ -0.48
KDM4A-204ENST00000481296 C10orf71Q711Q0 1435 aa12.04□□□□□ -0.48
KDM4A-204ENST00000481296 ZBTB7BO15156 539 aaPredicted RBP12.04□□□□□ -0.48
KDM4A-204ENST00000481296 ZBTB7AO95365 584 aa12.04□□□□□ -0.48
KDM4A-204ENST00000481296 TM4SF1P30408 202 aa12.04□□□□□ -0.48
KDM4A-204ENST00000481296 CASP7P55210 303 aa12.04□□□□□ -0.48
KDM4A-204ENST00000481296 NUTM1Q86Y26 1132 aa12.04□□□□□ -0.48
KDM4A-204ENST00000481296 JARID2Q92833 1246 aaPredicted RBP12.04□□□□□ -0.48
KDM4A-204ENST00000481296 FAM89AQ96GI7 184 aa12.04□□□□□ -0.48
KDM4A-204ENST00000481296 C1orf115Q9H7X2 142 aa12.04□□□□□ -0.48
KDM4A-204ENST00000481296 LRRFIP2Q9Y608 721 aaKnown RBP12.04□□□□□ -0.48
KDM4A-204ENST00000481296 PARP3Q9Y6F1 533 aa12.04□□□□□ -0.48
KDM4A-204ENST00000481296 H7C1W4 665 aa12.03□□□□□ -0.48
KDM4A-204ENST00000481296 GNAI2P04899 355 aa12.03□□□□□ -0.48
KDM4A-204ENST00000481296 SERPINB2P05120 415 aa12.03□□□□□ -0.48
KDM4A-204ENST00000481296 GTF2E1P29083 439 aaPredicted RBP12.03□□□□□ -0.48
KDM4A-204ENST00000481296 ST5P78524 1137 aa12.03□□□□□ -0.48
KDM4A-204ENST00000481296 SUCLG2Q96I99 432 aa12.03□□□□□ -0.48
KDM4A-204ENST00000481296 ZBTB40Q9NUA8 1239 aa12.03□□□□□ -0.48
KDM4A-204ENST00000481296 HDAC5Q9UQL6 1122 aa12.03□□□□□ -0.48
KDM4A-204ENST00000481296 IRS4O14654 1257 aaPredicted RBP12.02□□□□□ -0.49
KDM4A-204ENST00000481296 HSP90B1P14625 803 aaKnown RBP12.02□□□□□ -0.49
KDM4A-204ENST00000481296 AAMPQ13685 434 aa12.02□□□□□ -0.49
KDM4A-204ENST00000481296 ERFEQ4G0M1 354 aa12.02□□□□□ -0.49
KDM4A-204ENST00000481296 PRR5LQ6MZQ0 368 aa12.02□□□□□ -0.49
KDM4A-204ENST00000481296 TPTE2Q6XPS3 522 aa12.02□□□□□ -0.49
KDM4A-204ENST00000481296 COL4A1P02462 1669 aa12.02□□□□□ -0.49
KDM4A-204ENST00000481296 ARAP2Q8WZ64 1704 aa12.01□□□□□ -0.49
KDM4A-204ENST00000481296 POLD1P28340 1107 aa12.01□□□□□ -0.49
KDM4A-204ENST00000481296 SYNE4Q8N205 404 aa12.01□□□□□ -0.49
KDM4A-204ENST00000481296 PLA2G12BQ9BX93 195 aa12.01□□□□□ -0.49
KDM4A-204ENST00000481296 BICC1Q9H694 974 aaKnown RBP12.01□□□□□ -0.49
KDM4A-204ENST00000481296 PDE8AO60658 829 aa12□□□□□ -0.49
KDM4A-204ENST00000481296 HCLS1P14317 486 aaPredicted RBP12□□□□□ -0.49
KDM4A-204ENST00000481296 CTSWP56202 376 aa12□□□□□ -0.49
KDM4A-204ENST00000481296 CCDC24Q8N4L8 307 aa12□□□□□ -0.49
KDM4A-204ENST00000481296 KAZALD1Q96I82 304 aa12□□□□□ -0.49
KDM4A-204ENST00000481296 ATF5Q9Y2D1 282 aaPredicted RBP12□□□□□ -0.49
KDM4A-204ENST00000481296 ARFGEF1Q9Y6D6 1849 aa12□□□□□ -0.49
KDM4A-204ENST00000481296 RABL6Q3YEC7 729 aaPredicted RBP11.99□□□□□ -0.49
KDM4A-204ENST00000481296 EPHA10Q5JZY3 1008 aa11.99□□□□□ -0.49
KDM4A-204ENST00000481296 ERICH6BQ5W0A0 696 aa11.99□□□□□ -0.49
KDM4A-204ENST00000481296 CEP85Q6P2H3 762 aa11.99□□□□□ -0.49
KDM4A-204ENST00000481296 ANKRD44Q8N8A2 993 aa11.99□□□□□ -0.49
KDM4A-204ENST00000481296 MYH13Q9UKX3 1938 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms