RNA–Protein interactions for RNA: ENST00000480835.1

SNRNP200-205, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 540 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-205ENST00000480835 ADRA2BP18089 450 aa18.39■□□□□ 0.53
SNRNP200-205ENST00000480835 TXNRD1Q16881 649 aa18.39■□□□□ 0.53
SNRNP200-205ENST00000480835 RABL6Q3YEC7 729 aaPredicted RBP18.39■□□□□ 0.53
SNRNP200-205ENST00000480835 PARP10Q53GL7 1025 aa18.39■□□□□ 0.53
SNRNP200-205ENST00000480835 HSP90AB4PQ58FF6 505 aa18.39■□□□□ 0.53
SNRNP200-205ENST00000480835 ANKRD45Q5TZF3 282 aa18.39■□□□□ 0.53
SNRNP200-205ENST00000480835 NLRP10Q86W26 655 aa18.39■□□□□ 0.53
SNRNP200-205ENST00000480835 ZBTB38Q8NAP3 1195 aaPredicted RBP18.39■□□□□ 0.53
SNRNP200-205ENST00000480835 APBA3O96018 575 aa18.38■□□□□ 0.53
SNRNP200-205ENST00000480835 NARFQ9UHQ1 456 aa18.38■□□□□ 0.53
SNRNP200-205ENST00000480835 CDHR2Q9BYE9 1310 aa18.38■□□□□ 0.53
SNRNP200-205ENST00000480835 C4AP0C0L4 1744 aa18.37■□□□□ 0.53
SNRNP200-205ENST00000480835 RAB11FIP3O75154 756 aa18.37■□□□□ 0.53
SNRNP200-205ENST00000480835 PLA2G12BQ9BX93 195 aa18.37■□□□□ 0.53
SNRNP200-205ENST00000480835 MYH3P11055 1940 aa18.37■□□□□ 0.53
SNRNP200-205ENST00000480835 GPTP24298 496 aa18.36■□□□□ 0.53
SNRNP200-205ENST00000480835 RGS3P49796 1198 aa18.36■□□□□ 0.53
SNRNP200-205ENST00000480835 NOP58Q9Y2X3 529 aaKnown RBP18.36■□□□□ 0.53
SNRNP200-205ENST00000480835 ZPR1O75312 459 aa18.35■□□□□ 0.53
SNRNP200-205ENST00000480835 TRAPPC3LQ5T215 181 aa18.35■□□□□ 0.53
SNRNP200-205ENST00000480835 LNPKQ9C0E8 428 aa18.35■□□□□ 0.53
SNRNP200-205ENST00000480835 UBN2Q6ZU65 1347 aa18.34■□□□□ 0.53
SNRNP200-205ENST00000480835 SURF6O75683 361 aaKnown RBP18.34■□□□□ 0.53
SNRNP200-205ENST00000480835 HSP90B1P14625 803 aaKnown RBP18.34■□□□□ 0.53
SNRNP200-205ENST00000480835 SSFA2P28290 1259 aa18.34■□□□□ 0.53
SNRNP200-205ENST00000480835 FOXO4P98177 505 aa18.34■□□□□ 0.53
SNRNP200-205ENST00000480835 EPHA10Q5JZY3 1008 aa18.34■□□□□ 0.53
SNRNP200-205ENST00000480835 JARID2Q92833 1246 aaPredicted RBP18.34■□□□□ 0.53
SNRNP200-205ENST00000480835 TRMT112Q9UI30 125 aaKnown RBP18.34■□□□□ 0.53
SNRNP200-205ENST00000480835 LAMB2P55268 1798 aa18.33■□□□□ 0.53
SNRNP200-205ENST00000480835 PDE4AP27815 886 aa18.33■□□□□ 0.52
SNRNP200-205ENST00000480835 SKAP1Q86WV1 359 aa18.33■□□□□ 0.52
SNRNP200-205ENST00000480835 ERC1Q8IUD2 1116 aa18.33■□□□□ 0.52
SNRNP200-205ENST00000480835 PROM2Q8N271 834 aa18.33■□□□□ 0.52
SNRNP200-205ENST00000480835 ARHGEF1Q92888 912 aaKnown RBP18.33■□□□□ 0.52
SNRNP200-205ENST00000480835 UTP14AQ9BVJ6 771 aaKnown RBP18.33■□□□□ 0.52
SNRNP200-205ENST00000480835 LRRCC1Q9C099 1032 aa18.33■□□□□ 0.52
SNRNP200-205ENST00000480835 NIP7Q9Y221 180 aaKnown RBP eCLIP18.33■□□□□ 0.52
SNRNP200-205ENST00000480835 EXOC6BQ9Y2D4 811 aa18.33■□□□□ 0.52
SNRNP200-205ENST00000480835 RFC4P35249 363 aa18.32■□□□□ 0.52
SNRNP200-205ENST00000480835 LMBR1LQ6UX01 489 aa18.32■□□□□ 0.52
SNRNP200-205ENST00000480835 COL24A1Q17RW2 1714 aa18.32■□□□□ 0.52
SNRNP200-205ENST00000480835 SH3TC1Q8TE82 1336 aa18.31■□□□□ 0.52
SNRNP200-205ENST00000480835 USP42Q9H9J4 1324 aaKnown RBP18.31■□□□□ 0.52
SNRNP200-205ENST00000480835 USPL1Q5W0Q7 1092 aa18.31■□□□□ 0.52
SNRNP200-205ENST00000480835 KIF1BPQ96EK5 621 aa18.31■□□□□ 0.52
SNRNP200-205ENST00000480835 FAM89AQ96GI7 184 aa18.31■□□□□ 0.52
SNRNP200-205ENST00000480835 COPRSQ9NQ92 184 aa18.31■□□□□ 0.52
SNRNP200-205ENST00000480835 IRS4O14654 1257 aaPredicted RBP18.3■□□□□ 0.52
SNRNP200-205ENST00000480835 PDE8AO60658 829 aa18.3■□□□□ 0.52
SNRNP200-205ENST00000480835 RTL5Q5HYW3 569 aaPredicted RBP18.3■□□□□ 0.52
SNRNP200-205ENST00000480835 SUSD4Q5VX71 490 aa18.3■□□□□ 0.52
SNRNP200-205ENST00000480835 ILDR1Q86SU0 546 aaPredicted RBP18.3■□□□□ 0.52
SNRNP200-205ENST00000480835 BCL2L12Q9HB09 334 aa18.3■□□□□ 0.52
SNRNP200-205ENST00000480835 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.29■□□□□ 0.52
SNRNP200-205ENST00000480835 NTSR2O95665 410 aa18.29■□□□□ 0.52
SNRNP200-205ENST00000480835 CSF1RP07333 972 aa18.29■□□□□ 0.52
SNRNP200-205ENST00000480835 RFX5P48382 616 aaPredicted RBP18.29■□□□□ 0.52
SNRNP200-205ENST00000480835 G3BP1Q13283 466 aaKnown RBP eCLIP18.29■□□□□ 0.528e-10■■□□□ 12.6
SNRNP200-205ENST00000480835 OS9Q13438 667 aaPredicted RBP18.29■□□□□ 0.52
SNRNP200-205ENST00000480835 SRP68Q9UHB9 627 aaKnown RBP18.29■□□□□ 0.52
SNRNP200-205ENST00000480835 DDX60Q8IY21 1712 aaKnown RBP18.29■□□□□ 0.52
SNRNP200-205ENST00000480835 APBB1O00213 710 aa18.28■□□□□ 0.52
SNRNP200-205ENST00000480835 PHF14O94880 888 aa18.28■□□□□ 0.52
SNRNP200-205ENST00000480835 AMIGO3Q86WK7 504 aa18.28■□□□□ 0.52
SNRNP200-205ENST00000480835 FLAD1Q8NFF5 587 aa18.28■□□□□ 0.52
SNRNP200-205ENST00000480835 RHPN1Q8TCX5 695 aa18.28■□□□□ 0.52
SNRNP200-205ENST00000480835 AKT1S1Q96B36 256 aa18.28■□□□□ 0.52
SNRNP200-205ENST00000480835 NYXQ9GZU5 481 aa18.28■□□□□ 0.52
SNRNP200-205ENST00000480835 SMARCA5O60264 1052 aaPredicted RBP18.27■□□□□ 0.52
SNRNP200-205ENST00000480835 CTSWP56202 376 aa18.27■□□□□ 0.52
SNRNP200-205ENST00000480835 PTPN12Q05209 780 aaKnown RBP18.27■□□□□ 0.52
SNRNP200-205ENST00000480835 SF3B2Q13435 895 aaKnown RBP18.27■□□□□ 0.52
SNRNP200-205ENST00000480835 TBC1D9BQ66K14 1250 aa18.27■□□□□ 0.52
SNRNP200-205ENST00000480835 SMIM5Q71RC9 77 aa18.27■□□□□ 0.52
SNRNP200-205ENST00000480835 SETDB2Q96T68 719 aa18.27■□□□□ 0.52
SNRNP200-205ENST00000480835 FBXO3Q9UK99 471 aa18.27■□□□□ 0.52
SNRNP200-205ENST00000480835 PA2G4Q9UQ80 394 aaKnown RBP18.27■□□□□ 0.52
SNRNP200-205ENST00000480835 CHMP3Q9Y3E7 222 aa18.27■□□□□ 0.52
SNRNP200-205ENST00000480835 TUBGCP6Q96RT7 1819 aa18.27■□□□□ 0.52
SNRNP200-205ENST00000480835 CCDC57Q2TAC2 916 aa18.26■□□□□ 0.51
SNRNP200-205ENST00000480835 BAG6P46379 1132 aa18.25■□□□□ 0.51
SNRNP200-205ENST00000480835 PLEKHM2Q8IWE5 1019 aa18.25■□□□□ 0.51
SNRNP200-205ENST00000480835 TTLL11Q8NHH1 800 aa18.25■□□□□ 0.51
SNRNP200-205ENST00000480835 CAMKK2Q96RR4 588 aa18.25■□□□□ 0.51
SNRNP200-205ENST00000480835 QSER1Q2KHR3 1735 aa18.25■□□□□ 0.51
SNRNP200-205ENST00000480835 CIAO1O76071 339 aa18.24■□□□□ 0.51
SNRNP200-205ENST00000480835 IFIT5Q13325 482 aaKnown RBP18.24■□□□□ 0.51
SNRNP200-205ENST00000480835 SYNE4Q8N205 404 aa18.24■□□□□ 0.51
SNRNP200-205ENST00000480835 CLASRPQ8N2M8 674 aaKnown RBP18.24■□□□□ 0.51
SNRNP200-205ENST00000480835 OSBPL3Q9H4L5 887 aa18.24■□□□□ 0.51
SNRNP200-205ENST00000480835 TFCP2L1Q9NZI6 479 aa18.24■□□□□ 0.51
SNRNP200-205ENST00000480835 AOX1Q06278 1338 aa18.23■□□□□ 0.51
SNRNP200-205ENST00000480835 CARMIL3Q8ND23 1372 aa18.23■□□□□ 0.51
SNRNP200-205ENST00000480835 RTL9Q8NET4 1388 aa18.23■□□□□ 0.51
SNRNP200-205ENST00000480835 FAM177BA6PVY3 158 aa18.23■□□□□ 0.51
SNRNP200-205ENST00000480835 ZNF827Q17R98 1081 aa18.23■□□□□ 0.51
SNRNP200-205ENST00000480835 FAM161AQ3B820 660 aa18.23■□□□□ 0.51
SNRNP200-205ENST00000480835 SLC10A5Q5PT55 438 aa18.23■□□□□ 0.51
SNRNP200-205ENST00000480835 BICDL1Q6ZP65 573 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms