RNA–Protein interactions for RNA: ENST00000480549.5

SH3D21-203, Transcript of SH3 domain containing 21, humanhuman

TSL 2

Gene SH3D21, Length 3,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-203ENST00000480549 NAP1L2Q9ULW6 460 aaPredicted RBP20.39■□□□□ 0.85
SH3D21-203ENST00000480549 RABL6Q3YEC7 729 aaPredicted RBP20.39■□□□□ 0.85
SH3D21-203ENST00000480549 UBE3BQ7Z3V4 1068 aa20.39■□□□□ 0.85
SH3D21-203ENST00000480549 K7ELQ4 463 aaPredicted RBP20.38■□□□□ 0.85
SH3D21-203ENST00000480549 MAP4K4O95819 1239 aaPredicted RBP20.38■□□□□ 0.85
SH3D21-203ENST00000480549 ASAP1Q9ULH1 1129 aa20.38■□□□□ 0.85
SH3D21-203ENST00000480549 GTF2E1P29083 439 aaPredicted RBP20.38■□□□□ 0.85
SH3D21-203ENST00000480549 A0A087WZG4 1122 aa20.38■□□□□ 0.85
SH3D21-203ENST00000480549 RFX5P48382 616 aaPredicted RBP20.38■□□□□ 0.85
SH3D21-203ENST00000480549 KLHDC4Q8TBB5 520 aa20.38■□□□□ 0.85
SH3D21-203ENST00000480549 G3BP1Q13283 466 aaKnown RBP eCLIP20.37■□□□□ 0.85
SH3D21-203ENST00000480549 IL25Q9H293 177 aa20.37■□□□□ 0.85
SH3D21-203ENST00000480549 ATG3Q9NT62 314 aa20.37■□□□□ 0.85
SH3D21-203ENST00000480549 CHMP5Q9NZZ3 219 aa20.37■□□□□ 0.85
SH3D21-203ENST00000480549 MCM4P33991 863 aa20.37■□□□□ 0.85
SH3D21-203ENST00000480549 BCL9O00512 1426 aa20.37■□□□□ 0.85
SH3D21-203ENST00000480549 TRAK2O60296 914 aa20.36■□□□□ 0.85
SH3D21-203ENST00000480549 GLRX3O76003 335 aaKnown RBP20.36■□□□□ 0.85
SH3D21-203ENST00000480549 SMAP1Q8IYB5 467 aaPredicted RBP20.36■□□□□ 0.85
SH3D21-203ENST00000480549 DOT1LQ8TEK3 1739 aa20.36■□□□□ 0.85
SH3D21-203ENST00000480549 SIL1Q9H173 461 aa20.36■□□□□ 0.85
SH3D21-203ENST00000480549 COPRSQ9NQ92 184 aa20.36■□□□□ 0.85
SH3D21-203ENST00000480549 ECHDC1Q9NTX5 307 aa20.36■□□□□ 0.85
SH3D21-203ENST00000480549 H7C1W4 665 aa20.35■□□□□ 0.85
SH3D21-203ENST00000480549 AACSQ86V21 672 aa20.35■□□□□ 0.85
SH3D21-203ENST00000480549 EAF2Q96CJ1 260 aaPredicted RBP20.35■□□□□ 0.85
SH3D21-203ENST00000480549 IFIT2P09913 472 aaKnown RBP20.35■□□□□ 0.85
SH3D21-203ENST00000480549 CNTROBQ8N137 903 aa20.35■□□□□ 0.85
SH3D21-203ENST00000480549 ZBTB3Q9H5J0 574 aa20.34■□□□□ 0.85
SH3D21-203ENST00000480549 PTPN12Q05209 780 aaKnown RBP20.34■□□□□ 0.85
SH3D21-203ENST00000480549 DNAJC10Q8IXB1 793 aa20.34■□□□□ 0.85
SH3D21-203ENST00000480549 CWC25Q9NXE8 425 aaPredicted RBP20.33■□□□□ 0.84
SH3D21-203ENST00000480549 EXOC5O00471 708 aa20.32■□□□□ 0.84
SH3D21-203ENST00000480549 FOXO4P98177 505 aa20.32■□□□□ 0.84
SH3D21-203ENST00000480549 ANO2Q9NQ90 1003 aa20.32■□□□□ 0.84
SH3D21-203ENST00000480549 GPATCH3Q96I76 525 aa20.32■□□□□ 0.84
SH3D21-203ENST00000480549 MAP7D2Q96T17 732 aa20.32■□□□□ 0.84
SH3D21-203ENST00000480549 TEX13AQ9BXU3 409 aaPredicted RBP20.32■□□□□ 0.84
SH3D21-203ENST00000480549 ADAMTS2O95450 1211 aa20.32■□□□□ 0.84
SH3D21-203ENST00000480549 TLR7Q9NYK1 1049 aaKnown RBP20.32■□□□□ 0.84
SH3D21-203ENST00000480549 NWD2Q9ULI1 1742 aa20.31■□□□□ 0.84
SH3D21-203ENST00000480549 IL17RAQ96F46 866 aa20.31■□□□□ 0.84
SH3D21-203ENST00000480549 SPATA31A1Q5TZJ5 1347 aa20.31■□□□□ 0.84
SH3D21-203ENST00000480549 SGSM2O43147 1006 aa20.31■□□□□ 0.84
SH3D21-203ENST00000480549 EPB41L2O43491 1005 aaKnown RBP20.31■□□□□ 0.84
SH3D21-203ENST00000480549 CCDC191Q8NCU4 936 aa20.31■□□□□ 0.84
SH3D21-203ENST00000480549 CCDC8Q9H0W5 538 aaPredicted RBP20.31■□□□□ 0.84
SH3D21-203ENST00000480549 PALD1Q9ULE6 856 aa20.31■□□□□ 0.84
SH3D21-203ENST00000480549 SLC4A9Q96Q91 983 aa20.3■□□□□ 0.84
SH3D21-203ENST00000480549 R3HCC1Q9Y3T6 440 aaKnown RBP20.3■□□□□ 0.84
SH3D21-203ENST00000480549 ISCA1Q9BUE6 129 aa20.3■□□□□ 0.84
SH3D21-203ENST00000480549 LMBR1LQ6UX01 489 aa20.29■□□□□ 0.84
SH3D21-203ENST00000480549 CIZ1Q9ULV3 898 aaPredicted RBP20.29■□□□□ 0.84
SH3D21-203ENST00000480549 KAT6BQ8WYB5 2073 aa20.29■□□□□ 0.84
SH3D21-203ENST00000480549 ANAPC15P60006 121 aa20.28■□□□□ 0.84
SH3D21-203ENST00000480549 MCCP23508 829 aa20.28■□□□□ 0.84
SH3D21-203ENST00000480549 ST18O60284 1047 aa20.28■□□□□ 0.84
SH3D21-203ENST00000480549 THRAP3Q9Y2W1 955 aaKnown RBP20.28■□□□□ 0.84
SH3D21-203ENST00000480549 ANKRD36CQ5JPF3 1778 aa20.27■□□□□ 0.84
SH3D21-203ENST00000480549 STARD3NLO95772 234 aa20.27■□□□□ 0.84
SH3D21-203ENST00000480549 CDCA7Q9BWT1 371 aaPredicted RBP20.27■□□□□ 0.84
SH3D21-203ENST00000480549 FOXD4L1Q9NU39 408 aa20.27■□□□□ 0.84
SH3D21-203ENST00000480549 TCIRG1Q13488 830 aa20.27■□□□□ 0.84
SH3D21-203ENST00000480549 EVI5LQ96CN4 794 aa20.27■□□□□ 0.84
SH3D21-203ENST00000480549 RAD50Q92878 1312 aa20.26■□□□□ 0.83
SH3D21-203ENST00000480549 OFD1O75665 1012 aa20.26■□□□□ 0.83
SH3D21-203ENST00000480549 LSG1Q9H089 658 aaKnown RBP20.26■□□□□ 0.83
SH3D21-203ENST00000480549 SLIT2O94813 1529 aa20.26■□□□□ 0.83
SH3D21-203ENST00000480549 HSPA4P34932 840 aa20.26■□□□□ 0.83
SH3D21-203ENST00000480549 TFCP2Q12800 502 aa20.26■□□□□ 0.83
SH3D21-203ENST00000480549 CYP19A1P11511 503 aaPredicted RBP20.26■□□□□ 0.83
SH3D21-203ENST00000480549 CWC27Q6UX04 472 aaKnown RBP20.26■□□□□ 0.83
SH3D21-203ENST00000480549 TNNI3KQ59H18 835 aa20.25■□□□□ 0.83
SH3D21-203ENST00000480549 FPGT-TNNI3KV9GXZ4 949 aa20.25■□□□□ 0.83
SH3D21-203ENST00000480549 ZNF330Q9Y3S2 320 aaPredicted RBP20.25■□□□□ 0.83
SH3D21-203ENST00000480549 PRIM1P49642 420 aaKnown RBP20.24■□□□□ 0.83
SH3D21-203ENST00000480549 TRIM28Q13263 835 aaKnown RBP20.24■□□□□ 0.83
SH3D21-203ENST00000480549 DBNLQ9UJU6 430 aaKnown RBP20.24■□□□□ 0.83
SH3D21-203ENST00000480549 SPATA31A5Q5VU36 1347 aa20.24■□□□□ 0.83
SH3D21-203ENST00000480549 SPATA31A7Q8IWB4 1347 aa20.24■□□□□ 0.83
SH3D21-203ENST00000480549 RAB3GAP1Q15042 981 aa20.24■□□□□ 0.83
SH3D21-203ENST00000480549 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.24■□□□□ 0.83
SH3D21-203ENST00000480549 SYTL4Q96C24 671 aaPredicted RBP20.24■□□□□ 0.83
SH3D21-203ENST00000480549 KIF6Q6ZMV9 814 aa20.24■□□□□ 0.83
SH3D21-203ENST00000480549 DIAPH3Q9NSV4 1193 aa20.24■□□□□ 0.83
SH3D21-203ENST00000480549 NUTM2BA6NNL0 878 aaPredicted RBP20.23■□□□□ 0.83
SH3D21-203ENST00000480549 NUTM2EB1AL46 878 aaPredicted RBP20.23■□□□□ 0.83
SH3D21-203ENST00000480549 PIP4K2BP78356 416 aa20.23■□□□□ 0.83
SH3D21-203ENST00000480549 NUTM2AQ8IVF1 878 aaPredicted RBP20.23■□□□□ 0.83
SH3D21-203ENST00000480549 MAP3K15Q6ZN16 1313 aa20.23■□□□□ 0.83
SH3D21-203ENST00000480549 MSNP26038 577 aaKnown RBP20.23■□□□□ 0.83
SH3D21-203ENST00000480549 NEK4P51957 841 aa20.23■□□□□ 0.83
SH3D21-203ENST00000480549 DDB1Q16531 1140 aa20.23■□□□□ 0.83
SH3D21-203ENST00000480549 ATG9AQ7Z3C6 839 aa20.23■□□□□ 0.83
SH3D21-203ENST00000480549 NUP98P52948 1817 aa20.23■□□□□ 0.83
SH3D21-203ENST00000480549 TOM1O60784 492 aa20.22■□□□□ 0.83
SH3D21-203ENST00000480549 BOLA2Q9H3K6 86 aa20.22■□□□□ 0.83
SH3D21-203ENST00000480549 CHMP3Q9Y3E7 222 aa20.22■□□□□ 0.83
SH3D21-203ENST00000480549 TAF7LQ5H9L4 462 aa20.22■□□□□ 0.83
SH3D21-203ENST00000480549 GAS2L3Q86XJ1 694 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms