RNA–Protein interactions for RNA: ENST00000480382.1

CCM2-212, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-212ENST00000480382 RIC1Q4ADV7 1423 aa15.47■□□□□ 0.07
CCM2-212ENST00000480382 PPP1R42Q7Z4L9 355 aa15.47■□□□□ 0.07
CCM2-212ENST00000480382 NLRP10Q86W26 655 aa15.47■□□□□ 0.07
CCM2-212ENST00000480382 BCS1LQ9Y276 419 aa15.47■□□□□ 0.07
CCM2-212ENST00000480382 H0YIN7 160 aa15.46■□□□□ 0.07
CCM2-212ENST00000480382 MYD88Q99836 296 aa15.46■□□□□ 0.07
CCM2-212ENST00000480382 ISCA1Q9BUE6 129 aa15.46■□□□□ 0.07
CCM2-212ENST00000480382 UTP14AQ9BVJ6 771 aaKnown RBP15.46■□□□□ 0.07
CCM2-212ENST00000480382 PIM2Q9P1W9 311 aa15.46■□□□□ 0.07
CCM2-212ENST00000480382 MAP3K2Q9Y2U5 619 aa15.46■□□□□ 0.07
CCM2-212ENST00000480382 PI4KAP2A4QPH2 592 aa15.45■□□□□ 0.06
CCM2-212ENST00000480382 FKBP5Q13451 457 aaPredicted RBP15.45■□□□□ 0.06
CCM2-212ENST00000480382 KSR2Q6VAB6 950 aa15.45■□□□□ 0.06
CCM2-212ENST00000480382 PI4KAP1Q8N8J0 262 aa15.45■□□□□ 0.06
CCM2-212ENST00000480382 RNF123Q5XPI4 1314 aa15.44■□□□□ 0.06
CCM2-212ENST00000480382 ZBED9Q6R2W3 1325 aa15.44■□□□□ 0.06
CCM2-212ENST00000480382 ZNF622Q969S3 477 aaKnown RBP eCLIP15.44■□□□□ 0.06
CCM2-212ENST00000480382 METTL22Q9BUU2 404 aaPredicted RBP15.44■□□□□ 0.06
CCM2-212ENST00000480382 PDZRN3Q9UPQ7 1066 aa15.44■□□□□ 0.06
CCM2-212ENST00000480382 SLX4Q8IY92 1834 aa15.44■□□□□ 0.06
CCM2-212ENST00000480382 GRIN3BO60391 1043 aa15.43■□□□□ 0.06
CCM2-212ENST00000480382 SRGNP10124 158 aa15.43■□□□□ 0.06
CCM2-212ENST00000480382 DALRD3Q5D0E6 543 aaKnown RBP15.43■□□□□ 0.06
CCM2-212ENST00000480382 TRMT112Q9UI30 125 aaKnown RBP15.43■□□□□ 0.06
CCM2-212ENST00000480382 KLRG2A4D1S0 409 aaPredicted RBP15.42■□□□□ 0.06
CCM2-212ENST00000480382 SYNE4Q8N205 404 aa15.42■□□□□ 0.06
CCM2-212ENST00000480382 MASTLQ96GX5 879 aa15.42■□□□□ 0.06
CCM2-212ENST00000480382 BCL2L13Q9BXK5 485 aa15.42■□□□□ 0.06
CCM2-212ENST00000480382 SH3TC1Q8TE82 1336 aa15.42■□□□□ 0.06
CCM2-212ENST00000480382 IGKV5-2P06315 115 aa15.41■□□□□ 0.06
CCM2-212ENST00000480382 TRIM28Q13263 835 aaKnown RBP15.41■□□□□ 0.06
CCM2-212ENST00000480382 STYK1Q6J9G0 422 aa15.41■□□□□ 0.06
CCM2-212ENST00000480382 C3orf67Q6ZVT6 689 aa15.41■□□□□ 0.06
CCM2-212ENST00000480382 MRPL50Q8N5N7 158 aaKnown RBP15.41■□□□□ 0.06
CCM2-212ENST00000480382 TTLL6Q8N841 843 aa15.41■□□□□ 0.06
CCM2-212ENST00000480382 SSH1Q8WYL5 1049 aa15.41■□□□□ 0.06
CCM2-212ENST00000480382 FAM89AQ96GI7 184 aa15.41■□□□□ 0.06
CCM2-212ENST00000480382 MYH3P11055 1940 aa15.41■□□□□ 0.06
CCM2-212ENST00000480382 TAF1P21675 1872 aa15.4■□□□□ 0.06
CCM2-212ENST00000480382 HCLS1P14317 486 aaPredicted RBP15.4■□□□□ 0.06
CCM2-212ENST00000480382 NPR1P16066 1061 aa15.4■□□□□ 0.06
CCM2-212ENST00000480382 NEXNQ0ZGT2 675 aa15.4■□□□□ 0.06
CCM2-212ENST00000480382 CWF19L2Q2TBE0 894 aaKnown RBP15.4■□□□□ 0.06
CCM2-212ENST00000480382 CRY2Q49AN0 593 aa15.4■□□□□ 0.06
CCM2-212ENST00000480382 RTL5Q5HYW3 569 aaPredicted RBP15.4■□□□□ 0.06
CCM2-212ENST00000480382 CCDC191Q8NCU4 936 aa15.4■□□□□ 0.06
CCM2-212ENST00000480382 DNAAF4Q8WXU2 420 aa15.4■□□□□ 0.06
CCM2-212ENST00000480382 CWC25Q9NXE8 425 aaPredicted RBP15.4■□□□□ 0.06
CCM2-212ENST00000480382 FER1L6Q2WGJ9 1857 aa15.4■□□□□ 0.06
CCM2-212ENST00000480382 F6X3S4 739 aa15.39■□□□□ 0.05
CCM2-212ENST00000480382 CT47B1P0C2W7 299 aaPredicted RBP15.39■□□□□ 0.05
CCM2-212ENST00000480382 ALDH1L2Q3SY69 923 aa15.39■□□□□ 0.05
CCM2-212ENST00000480382 PRPF40BQ6NWY9 871 aaKnown RBP15.39■□□□□ 0.05
CCM2-212ENST00000480382 CNKSR1Q969H4 720 aa15.39■□□□□ 0.05
CCM2-212ENST00000480382 SMC4Q9NTJ3 1288 aa15.39■□□□□ 0.05
CCM2-212ENST00000480382 SBF1O95248 1867 aa15.38■□□□□ 0.05
CCM2-212ENST00000480382 NEURL1BA8MQ27 555 aa15.38■□□□□ 0.05
CCM2-212ENST00000480382 SLC10A5Q5PT55 438 aa15.38■□□□□ 0.05
CCM2-212ENST00000480382 ZBTB38Q8NAP3 1195 aaPredicted RBP15.38■□□□□ 0.05
CCM2-212ENST00000480382 RPGRQ92834 1020 aaKnown RBP15.38■□□□□ 0.05
CCM2-212ENST00000480382 NLRP3Q96P20 1036 aa15.38■□□□□ 0.05
CCM2-212ENST00000480382 ZNF219Q9P2Y4 722 aaPredicted RBP15.38■□□□□ 0.05
CCM2-212ENST00000480382 PCCAP05165 728 aaPredicted RBP15.37■□□□□ 0.05
CCM2-212ENST00000480382 ARHGAP27Q6ZUM4 889 aa15.37■□□□□ 0.05
CCM2-212ENST00000480382 JARID2Q92833 1246 aaPredicted RBP15.37■□□□□ 0.05
CCM2-212ENST00000480382 COL4A1P02462 1669 aa15.37■□□□□ 0.05
CCM2-212ENST00000480382 CCDC88AQ3V6T2 1871 aa15.37■□□□□ 0.05
CCM2-212ENST00000480382 IRS4O14654 1257 aaPredicted RBP15.36■□□□□ 0.05
CCM2-212ENST00000480382 C21orf2O43822 256 aa15.36■□□□□ 0.05
CCM2-212ENST00000480382 TIAM2Q8IVF5 1701 aa15.36■□□□□ 0.05
CCM2-212ENST00000480382 PTPRCP08575 1304 aa15.36■□□□□ 0.05
CCM2-212ENST00000480382 YY1P25490 414 aa15.35■□□□□ 0.05
CCM2-212ENST00000480382 HOXA10P31260 410 aaPredicted RBP15.35■□□□□ 0.05
CCM2-212ENST00000480382 RARSP54136 660 aaKnown RBP15.35■□□□□ 0.05
CCM2-212ENST00000480382 RASSF7Q02833 373 aa15.35■□□□□ 0.05
CCM2-212ENST00000480382 BEND3Q5T5X7 828 aa15.35■□□□□ 0.05
CCM2-212ENST00000480382 SLC4A10Q6U841 1118 aa15.35■□□□□ 0.05
CCM2-212ENST00000480382 LINS1Q8NG48 757 aa15.35■□□□□ 0.05
CCM2-212ENST00000480382 SPEF2Q9C093 1822 aa15.35■□□□□ 0.05
CCM2-212ENST00000480382 ABCC4O15439 1325 aa15.35■□□□□ 0.05
CCM2-212ENST00000480382 LRRC37AA6NMS7 1700 aa15.34■□□□□ 0.05
CCM2-212ENST00000480382 ALDH1B1P30837 517 aa15.34■□□□□ 0.05
CCM2-212ENST00000480382 GCKRQ14397 625 aa15.34■□□□□ 0.05
CCM2-212ENST00000480382 RBM17Q96I25 401 aaKnown RBP15.34■□□□□ 0.05
CCM2-212ENST00000480382 CDHR2Q9BYE9 1310 aa15.34■□□□□ 0.05
CCM2-212ENST00000480382 OLFM4Q6UX06 510 aa15.33■□□□□ 0.04
CCM2-212ENST00000480382 UBE3BQ7Z3V4 1068 aa15.33■□□□□ 0.04
CCM2-212ENST00000480382 SLC51AQ86UW1 340 aa15.33■□□□□ 0.04
CCM2-212ENST00000480382 CRAMP1Q96RY5 1269 aa15.33■□□□□ 0.04
CCM2-212ENST00000480382 NFKBIEO00221 500 aa15.32■□□□□ 0.04
CCM2-212ENST00000480382 PPEF1O14829 653 aaPredicted RBP15.32■□□□□ 0.04
CCM2-212ENST00000480382 C7orf43Q8WVR3 580 aa15.32■□□□□ 0.04
CCM2-212ENST00000480382 DICER1Q9UPY3 1922 aaKnown RBP15.32■□□□□ 0.04
CCM2-212ENST00000480382 H7C1W4 665 aa15.31■□□□□ 0.04
CCM2-212ENST00000480382 PDE8AO60658 829 aa15.31■□□□□ 0.04
CCM2-212ENST00000480382 HSP90B1P14625 803 aaKnown RBP15.31■□□□□ 0.04
CCM2-212ENST00000480382 BRPF1P55201 1214 aaPredicted RBP15.31■□□□□ 0.04
CCM2-212ENST00000480382 CASP7P55210 303 aa15.31■□□□□ 0.04
CCM2-212ENST00000480382 SF3B3Q15393 1217 aaKnown RBP15.31■□□□□ 0.04
CCM2-212ENST00000480382 CCDC93Q567U6 631 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms