RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 STARD3NLO95772 234 aa16.51■□□□□ 0.23
USP11-208ENST00000480104 ZNF157P51786 506 aaPredicted RBP16.51■□□□□ 0.23
USP11-208ENST00000480104 FBXO46Q6PJ61 603 aaPredicted RBP16.51■□□□□ 0.23
USP11-208ENST00000480104 ZNF296Q8WUU4 475 aaPredicted RBP16.51■□□□□ 0.23
USP11-208ENST00000480104 CARD14Q9BXL6 1004 aa16.51■□□□□ 0.23
USP11-208ENST00000480104 HIRAP54198 1017 aaPredicted RBP16.5■□□□□ 0.23
USP11-208ENST00000480104 NEUROD1Q13562 356 aa16.5■□□□□ 0.23
USP11-208ENST00000480104 TRPM4Q8TD43 1214 aa16.5■□□□□ 0.23
USP11-208ENST00000480104 ZC3H15Q8WU90 426 aaKnown RBP16.5■□□□□ 0.23
USP11-208ENST00000480104 AKAP11Q9UKA4 1901 aa16.5■□□□□ 0.23
USP11-208ENST00000480104 POTEFA5A3E0 1075 aa16.49■□□□□ 0.23
USP11-208ENST00000480104 SLC10A3P09131 477 aa16.49■□□□□ 0.23
USP11-208ENST00000480104 GMPSP49915 693 aaPredicted RBP16.49■□□□□ 0.23
USP11-208ENST00000480104 USP48Q86UV5 1035 aa16.49■□□□□ 0.23
USP11-208ENST00000480104 NIM1KQ8IY84 436 aa16.49■□□□□ 0.23
USP11-208ENST00000480104 UNC80Q8N2C7 3258 aa16.48■□□□□ 0.23
USP11-208ENST00000480104 KIAA0100Q14667 2235 aaKnown RBP16.48■□□□□ 0.23
USP11-208ENST00000480104 LGR6Q9HBX8 967 aa16.48■□□□□ 0.23
USP11-208ENST00000480104 GBA2Q9HCG7 927 aaPredicted RBP16.48■□□□□ 0.23
USP11-208ENST00000480104 ALDH1B1P30837 517 aa16.47■□□□□ 0.23
USP11-208ENST00000480104 SLC51AQ86UW1 340 aa16.47■□□□□ 0.23
USP11-208ENST00000480104 NPC1L1Q9UHC9 1359 aa16.47■□□□□ 0.23
USP11-208ENST00000480104 LAMA3Q16787 3333 aa16.47■□□□□ 0.23
USP11-208ENST00000480104 IL6STP40189 918 aaPredicted RBP16.46■□□□□ 0.23
USP11-208ENST00000480104 C2orf69Q8N8R5 385 aa16.46■□□□□ 0.23
USP11-208ENST00000480104 TNNT2P45379 298 aaPredicted RBP16.45■□□□□ 0.22
USP11-208ENST00000480104 CXCL9Q07325 125 aa16.45■□□□□ 0.22
USP11-208ENST00000480104 TBC1D8O95759 1140 aa16.44■□□□□ 0.22
USP11-208ENST00000480104 CC2D2BQ6DHV5 1058 aa16.44■□□□□ 0.22
USP11-208ENST00000480104 CDHR2Q9BYE9 1310 aa16.44■□□□□ 0.22
USP11-208ENST00000480104 UBR2Q8IWV8 1755 aa16.43■□□□□ 0.22
USP11-208ENST00000480104 SHTN1A0MZ66 631 aa16.43■□□□□ 0.22
USP11-208ENST00000480104 RNMTO43148 476 aaKnown RBP16.43■□□□□ 0.22
USP11-208ENST00000480104 PPIP5K2O43314 1243 aa16.43■□□□□ 0.22
USP11-208ENST00000480104 SLC24A1O60721 1099 aa16.43■□□□□ 0.22
USP11-208ENST00000480104 DZIP3Q86Y13 1208 aaKnown RBP16.43■□□□□ 0.22
USP11-208ENST00000480104 PITPNM2Q9BZ72 1349 aa16.43■□□□□ 0.22
USP11-208ENST00000480104 MNX1P50219 401 aaPredicted RBP16.42■□□□□ 0.22
USP11-208ENST00000480104 AOC3Q16853 763 aa16.42■□□□□ 0.22
USP11-208ENST00000480104 KRT26Q7Z3Y9 468 aa16.42■□□□□ 0.22
USP11-208ENST00000480104 NPM2Q86SE8 214 aaKnown RBP16.42■□□□□ 0.22
USP11-208ENST00000480104 REM2Q8IYK8 340 aaPredicted RBP16.42■□□□□ 0.22
USP11-208ENST00000480104 FAM177BA6PVY3 158 aa16.41■□□□□ 0.22
USP11-208ENST00000480104 A1BGP04217 495 aa16.41■□□□□ 0.22
USP11-208ENST00000480104 TPTE2Q6XPS3 522 aa16.41■□□□□ 0.22
USP11-208ENST00000480104 RASAL3Q86YV0 1011 aa16.41■□□□□ 0.22
USP11-208ENST00000480104 OTUD5Q96G74 571 aa16.41■□□□□ 0.22
USP11-208ENST00000480104 BCL2L13Q9BXK5 485 aa16.41■□□□□ 0.22
USP11-208ENST00000480104 ADM5C9JUS6 153 aa16.4■□□□□ 0.22
USP11-208ENST00000480104 GPR25O00155 361 aa16.4■□□□□ 0.22
USP11-208ENST00000480104 SULT6B1Q6IMI4 303 aa16.4■□□□□ 0.22
USP11-208ENST00000480104 TTC5Q8N0Z6 440 aa16.4■□□□□ 0.22
USP11-208ENST00000480104 ZNF496Q96IT1 587 aaPredicted RBP16.4■□□□□ 0.22
USP11-208ENST00000480104 ZNRF3Q9ULT6 936 aa16.4■□□□□ 0.22
USP11-208ENST00000480104 H0YGN5 161 aa16.39■□□□□ 0.21
USP11-208ENST00000480104 EN2P19622 333 aaPredicted RBP16.39■□□□□ 0.21
USP11-208ENST00000480104 CRY2Q49AN0 593 aa16.39■□□□□ 0.21
USP11-208ENST00000480104 INTS3Q68E01 1043 aaKnown RBP16.39■□□□□ 0.21
USP11-208ENST00000480104 VCANP13611 3396 aa16.39■□□□□ 0.21
USP11-208ENST00000480104 HEG1Q9ULI3 1381 aa16.38■□□□□ 0.21
USP11-208ENST00000480104 GRIPAP1Q4V328 841 aa16.38■□□□□ 0.21
USP11-208ENST00000480104 CLEC4GQ6UXB4 293 aa16.38■□□□□ 0.21
USP11-208ENST00000480104 NIP7Q9Y221 180 aaKnown RBP eCLIP16.38■□□□□ 0.21
USP11-208ENST00000480104 PAPPA2Q9BXP8 1791 aa16.38■□□□□ 0.21
USP11-208ENST00000480104 ABCC12Q96J65 1359 aa16.38■□□□□ 0.21
USP11-208ENST00000480104 TCERG1O14776 1098 aaKnown RBP16.37■□□□□ 0.21
USP11-208ENST00000480104 RAD17O75943 681 aa16.37■□□□□ 0.21
USP11-208ENST00000480104 NOM1Q5C9Z4 860 aaKnown RBP16.37■□□□□ 0.21
USP11-208ENST00000480104 CHRDL2Q6WN34 429 aa16.37■□□□□ 0.21
USP11-208ENST00000480104 CNOT7Q9UIV1 285 aaKnown RBP16.37■□□□□ 0.21
USP11-208ENST00000480104 ZNF652Q9Y2D9 606 aa16.37■□□□□ 0.21
USP11-208ENST00000480104 MICALL2Q8IY33 904 aa16.36■□□□□ 0.21
USP11-208ENST00000480104 TEX13AQ9BXU3 409 aaPredicted RBP16.36■□□□□ 0.21
USP11-208ENST00000480104 H7C1D1 291 aa16.35■□□□□ 0.21
USP11-208ENST00000480104 FKTNO75072 461 aa16.35■□□□□ 0.21
USP11-208ENST00000480104 PIP4K2AP48426 406 aaPredicted RBP16.35■□□□□ 0.21
USP11-208ENST00000480104 RBBP6Q7Z6E9 1792 aaKnown RBP16.35■□□□□ 0.21
USP11-208ENST00000480104 PPEF1O14829 653 aaPredicted RBP16.34■□□□□ 0.21
USP11-208ENST00000480104 EGFRP00533 1210 aa16.34■□□□□ 0.21
USP11-208ENST00000480104 SAMD7Q7Z3H4 446 aa16.34■□□□□ 0.21
USP11-208ENST00000480104 RPGRQ92834 1020 aaKnown RBP16.34■□□□□ 0.21
USP11-208ENST00000480104 RBM27Q9P2N5 1060 aaKnown RBP16.34■□□□□ 0.21
USP11-208ENST00000480104 GTF2E1P29083 439 aaPredicted RBP16.33■□□□□ 0.2
USP11-208ENST00000480104 HOXA10P31260 410 aaPredicted RBP16.33■□□□□ 0.2
USP11-208ENST00000480104 TNIP1Q15025 636 aa16.33■□□□□ 0.2
USP11-208ENST00000480104 TBC1D10BQ4KMP7 808 aaPredicted RBP16.33■□□□□ 0.2
USP11-208ENST00000480104 RIC1Q4ADV7 1423 aa16.33■□□□□ 0.2
USP11-208ENST00000480104 DCPSQ96C86 337 aaKnown RBP16.32■□□□□ 0.2
USP11-208ENST00000480104 VPS33BQ9H267 617 aa16.32■□□□□ 0.2
USP11-208ENST00000480104 R3HDMLQ9H3Y0 253 aa16.32■□□□□ 0.2
USP11-208ENST00000480104 KIF7Q2M1P5 1343 aa16.31■□□□□ 0.2
USP11-208ENST00000480104 ZNF790Q6PG37 636 aa16.31■□□□□ 0.2
USP11-208ENST00000480104 NUTM1Q86Y26 1132 aa16.31■□□□□ 0.2
USP11-208ENST00000480104 CDCA5Q96FF9 252 aa16.31■□□□□ 0.2
USP11-208ENST00000480104 TRIM17Q9Y577 477 aa16.31■□□□□ 0.2
USP11-208ENST00000480104 CDCA8Q53HL2 280 aa16.3■□□□□ 0.2
USP11-208ENST00000480104 OTOP1Q7RTM1 612 aa16.3■□□□□ 0.2
USP11-208ENST00000480104 ZBTB12Q9Y330 459 aaPredicted RBP16.3■□□□□ 0.2
USP11-208ENST00000480104 SPTBN5Q9NRC6 3674 aaKnown RBP16.3■□□□□ 0.2
USP11-208ENST00000480104 PRAMEF22A3QJZ6 481 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms