RNA–Protein interactions for RNA: ENST00000479958.6

COMMD3-212, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-212ENST00000479958 CNTNAP5Q8WYK1 1306 aa10.37□□□□□ -0.75
COMMD3-212ENST00000479958 DGKZQ13574 1117 aa10.37□□□□□ -0.75
COMMD3-212ENST00000479958 TMEM164Q5U3C3 297 aa10.37□□□□□ -0.75
COMMD3-212ENST00000479958 MYO19Q96H55 970 aa10.37□□□□□ -0.75
COMMD3-212ENST00000479958 EFCC1Q9HA90 598 aa10.37□□□□□ -0.75
COMMD3-212ENST00000479958 SIN3BO75182 1162 aa10.36□□□□□ -0.75
COMMD3-212ENST00000479958 GDF11O95390 407 aa10.36□□□□□ -0.75
COMMD3-212ENST00000479958 KLK14Q9P0G3 267 aa10.36□□□□□ -0.75
COMMD3-212ENST00000479958 KLF15Q9UIH9 416 aa10.36□□□□□ -0.75
COMMD3-212ENST00000479958 FKBP5Q13451 457 aaPredicted RBP10.35□□□□□ -0.75
COMMD3-212ENST00000479958 CLP1Q92989 425 aaKnown RBP10.35□□□□□ -0.75
COMMD3-212ENST00000479958 SLC30A3Q99726 388 aa10.35□□□□□ -0.75
COMMD3-212ENST00000479958 QTRT2Q9H974 415 aaKnown RBP10.35□□□□□ -0.75
COMMD3-212ENST00000479958 PTCD1O75127 700 aaKnown RBP10.34□□□□□ -0.75
COMMD3-212ENST00000479958 FCHSD1Q86WN1 690 aa10.34□□□□□ -0.75
COMMD3-212ENST00000479958 COL26A1Q96A83 441 aa10.34□□□□□ -0.75
COMMD3-212ENST00000479958 ELOA3CA0A087WX78 387 aaPredicted RBP10.33□□□□□ -0.76
COMMD3-212ENST00000479958 ELOA3DA6NLF2 546 aaPredicted RBP10.33□□□□□ -0.76
COMMD3-212ENST00000479958 OCLNQ16625 522 aa10.33□□□□□ -0.76
COMMD3-212ENST00000479958 ELOA3BQ3SY89 546 aa10.33□□□□□ -0.76
COMMD3-212ENST00000479958 ELOA3Q8NG57 546 aa10.33□□□□□ -0.76
COMMD3-212ENST00000479958 IFT43Q96FT9 208 aa10.33□□□□□ -0.76
COMMD3-212ENST00000479958 CXXC1Q9P0U4 656 aaPredicted RBP10.33□□□□□ -0.76
COMMD3-212ENST00000479958 MICAL2O94851 1124 aa10.33□□□□□ -0.76
COMMD3-212ENST00000479958 PNMA5Q96PV4 448 aa10.33□□□□□ -0.76
COMMD3-212ENST00000479958 DMGDHQ9UI17 866 aaKnown RBP10.33□□□□□ -0.76
COMMD3-212ENST00000479958 BCS1LQ9Y276 419 aa10.33□□□□□ -0.76
COMMD3-212ENST00000479958 IDH3AP50213 366 aa10.32□□□□□ -0.76
COMMD3-212ENST00000479958 ARSDP51689 593 aa10.32□□□□□ -0.76
COMMD3-212ENST00000479958 SNRPNP63162 240 aaKnown RBP10.32□□□□□ -0.76
COMMD3-212ENST00000479958 GRIN2CQ14957 1233 aa10.32□□□□□ -0.76
COMMD3-212ENST00000479958 CHSY3Q70JA7 882 aa10.32□□□□□ -0.76
COMMD3-212ENST00000479958 BHMTQ93088 406 aa10.32□□□□□ -0.76
COMMD3-212ENST00000479958 C1orf115Q9H7X2 142 aa10.32□□□□□ -0.76
COMMD3-212ENST00000479958 C11orf16Q9NQ32 467 aa10.32□□□□□ -0.76
COMMD3-212ENST00000479958 ADARB2-AS1A8MUL3 147 aa10.31□□□□□ -0.76
COMMD3-212ENST00000479958 CCINQ13939 588 aa10.31□□□□□ -0.76
COMMD3-212ENST00000479958 COX20Q5RI15 118 aa10.31□□□□□ -0.76
COMMD3-212ENST00000479958 C16orf46Q6P387 395 aa10.31□□□□□ -0.76
COMMD3-212ENST00000479958 BRD2P25440 801 aaKnown RBP10.3□□□□□ -0.76
COMMD3-212ENST00000479958 INPP5BP32019 993 aa10.3□□□□□ -0.76
COMMD3-212ENST00000479958 GSK3AP49840 483 aa10.3□□□□□ -0.76
COMMD3-212ENST00000479958 TNFRSF25Q93038 417 aa10.3□□□□□ -0.76
COMMD3-212ENST00000479958 LRFN2Q9ULH4 789 aa10.3□□□□□ -0.76
COMMD3-212ENST00000479958 GSX2Q9BZM3 304 aa10.29□□□□□ -0.76
COMMD3-212ENST00000479958 ATP2B4P23634 1241 aa10.28□□□□□ -0.76
COMMD3-212ENST00000479958 RAB44Q7Z6P3 723 aaPredicted RBP10.28□□□□□ -0.76
COMMD3-212ENST00000479958 MKNK1Q9BUB5 465 aa10.28□□□□□ -0.76
COMMD3-212ENST00000479958 GNB5O14775 395 aa10.27□□□□□ -0.77
COMMD3-212ENST00000479958 LINC00114Q6XXX2 140 aa10.27□□□□□ -0.77
COMMD3-212ENST00000479958 ALYREFQ86V81 257 aaKnown RBP10.27□□□□□ -0.77
COMMD3-212ENST00000479958 IGFLR1Q9H665 355 aa10.27□□□□□ -0.77
COMMD3-212ENST00000479958 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.27□□□□□ -0.77
COMMD3-212ENST00000479958 NAA30Q147X3 362 aaPredicted RBP10.26□□□□□ -0.77
COMMD3-212ENST00000479958 TREML1Q86YW5 311 aa10.26□□□□□ -0.77
COMMD3-212ENST00000479958 FAM13BQ9NYF5 915 aa10.26□□□□□ -0.77
COMMD3-212ENST00000479958 NOP53Q9NZM5 478 aaKnown RBP10.26□□□□□ -0.77
COMMD3-212ENST00000479958 ADH7P40394 386 aa10.25□□□□□ -0.77
COMMD3-212ENST00000479958 DGKGP49619 791 aa10.25□□□□□ -0.77
COMMD3-212ENST00000479958 PCSK7Q16549 785 aa10.25□□□□□ -0.77
COMMD3-212ENST00000479958 UBE2OQ9C0C9 1292 aaKnown RBP10.25□□□□□ -0.77
COMMD3-212ENST00000479958 TBC1D8BQ0IIM8 1120 aa10.24□□□□□ -0.77
COMMD3-212ENST00000479958 KCTD17Q8N5Z5 321 aa10.24□□□□□ -0.77
COMMD3-212ENST00000479958 SAP130Q9H0E3 1048 aa10.24□□□□□ -0.77
COMMD3-212ENST00000479958 RTCBQ9Y3I0 505 aaKnown RBP10.24□□□□□ -0.77
COMMD3-212ENST00000479958 OPLAHO14841 1288 aa10.24□□□□□ -0.77
COMMD3-212ENST00000479958 HOXB4P17483 251 aaPredicted RBP10.24□□□□□ -0.77
COMMD3-212ENST00000479958 ARID4AP29374 1257 aaPredicted RBP10.24□□□□□ -0.77
COMMD3-212ENST00000479958 CMTR1Q8N1G2 835 aaKnown RBP10.24□□□□□ -0.77
COMMD3-212ENST00000479958 MDFIQ99750 246 aa10.24□□□□□ -0.77
COMMD3-212ENST00000479958 NFKB1P19838 968 aa10.23□□□□□ -0.77
COMMD3-212ENST00000479958 DCAF5Q96JK2 942 aa10.23□□□□□ -0.77
COMMD3-212ENST00000479958 SPDYE3A6NKU9 549 aa10.22□□□□□ -0.77
COMMD3-212ENST00000479958 SUPT5HO00267 1087 aaKnown RBP10.22□□□□□ -0.77
COMMD3-212ENST00000479958 RGL4Q8IZJ4 473 aa10.22□□□□□ -0.77
COMMD3-212ENST00000479958 STIM2Q9P246 746 aa10.22□□□□□ -0.77
COMMD3-212ENST00000479958 MAP3K6O95382 1288 aa10.21□□□□□ -0.78
COMMD3-212ENST00000479958 CAPN12Q6ZSI9 719 aa10.21□□□□□ -0.78
COMMD3-212ENST00000479958 PIK3R5Q8WYR1 880 aa10.21□□□□□ -0.78
COMMD3-212ENST00000479958 M0R082 166 aa10.2□□□□□ -0.78
COMMD3-212ENST00000479958 XYLBO75191 536 aa10.2□□□□□ -0.78
COMMD3-212ENST00000479958 SASH3O75995 380 aa10.2□□□□□ -0.78
COMMD3-212ENST00000479958 KRT25Q7Z3Z0 450 aa10.2□□□□□ -0.78
COMMD3-212ENST00000479958 ABTB2Q8N961 1025 aa10.2□□□□□ -0.78
COMMD3-212ENST00000479958 ZNF417Q8TAU3 575 aa10.2□□□□□ -0.78
COMMD3-212ENST00000479958 ZNF587Q96SQ5 575 aaPredicted RBP10.2□□□□□ -0.78
COMMD3-212ENST00000479958 MTMR7Q9Y216 660 aa10.2□□□□□ -0.78
COMMD3-212ENST00000479958 EGFRP00533 1210 aa10.19□□□□□ -0.78
COMMD3-212ENST00000479958 IGHA1P01876 353 aa10.19□□□□□ -0.78
COMMD3-212ENST00000479958 RARAP10276 462 aa10.19□□□□□ -0.78
COMMD3-212ENST00000479958 TARSP26639 723 aaKnown RBP10.19□□□□□ -0.78
COMMD3-212ENST00000479958 ETFBKMTQ8IXQ9 262 aa10.19□□□□□ -0.78
COMMD3-212ENST00000479958 MICALL1Q8N3F8 863 aa10.19□□□□□ -0.78
COMMD3-212ENST00000479958 PRDM6Q9NQX0 595 aa10.19□□□□□ -0.78
COMMD3-212ENST00000479958 DNAJB12Q9NXW2 375 aaKnown RBP10.19□□□□□ -0.78
COMMD3-212ENST00000479958 SLAIN2Q9P270 581 aa10.19□□□□□ -0.78
COMMD3-212ENST00000479958 TMEM88BA6NKF7 163 aa10.18□□□□□ -0.78
COMMD3-212ENST00000479958 GRNP28799 593 aaKnown RBP10.18□□□□□ -0.78
COMMD3-212ENST00000479958 ARID3AQ99856 593 aa10.18□□□□□ -0.78
COMMD3-212ENST00000479958 PLVAPQ9BX97 442 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms