RNA–Protein interactions for RNA: ENST00000479653.5

CCDC18-208, Transcript of coiled-coil domain containing 18, humanhuman

TSL 3

Gene CCDC18, Length 541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-208ENST00000479653 TEFQ10587 303 aa15.17■□□□□ 0.02
CCDC18-208ENST00000479653 CLEC4GQ6UXB4 293 aa15.17■□□□□ 0.02
CCDC18-208ENST00000479653 NBPF15Q8N660 670 aa15.17■□□□□ 0.02
CCDC18-208ENST00000479653 NIP7Q9Y221 180 aaKnown RBP eCLIP15.17■□□□□ 0.02
CCDC18-208ENST00000479653 MRC1P22897 1456 aa15.16■□□□□ 0.02
CCDC18-208ENST00000479653 TCERG1O14776 1098 aaKnown RBP15.16■□□□□ 0.02
CCDC18-208ENST00000479653 TRPA1O75762 1119 aa15.16■□□□□ 0.02
CCDC18-208ENST00000479653 HUNKP57058 714 aa15.16■□□□□ 0.02
CCDC18-208ENST00000479653 CC2D2BQ6DHV5 1058 aa15.16■□□□□ 0.02
CCDC18-208ENST00000479653 NIM1KQ8IY84 436 aa15.16■□□□□ 0.02
CCDC18-208ENST00000479653 GCC1Q96CN9 775 aa15.16■□□□□ 0.02
CCDC18-208ENST00000479653 FMNL2Q96PY5 1086 aa15.16■□□□□ 0.02
CCDC18-208ENST00000479653 GPRC5DQ9NZD1 345 aa15.16■□□□□ 0.02
CCDC18-208ENST00000479653 CDC37L1Q7L3B6 337 aa15.15■□□□□ 0.02
CCDC18-208ENST00000479653 PANK3Q9H999 370 aa15.14■□□□□ 0.01
CCDC18-208ENST00000479653 SAGE1Q9NXZ1 904 aa15.14■□□□□ 0.01
CCDC18-208ENST00000479653 SCN7AQ01118 1682 aa15.13■□□□□ 0.01
CCDC18-208ENST00000479653 PPIP5K2O43314 1243 aa15.13■□□□□ 0.01
CCDC18-208ENST00000479653 KIF23Q02241 960 aaPredicted RBP15.13■□□□□ 0.01
CCDC18-208ENST00000479653 CTU1Q7Z7A3 348 aaKnown RBP15.13■□□□□ 0.01
CCDC18-208ENST00000479653 RNF186Q9NXI6 227 aa15.13■□□□□ 0.01
CCDC18-208ENST00000479653 ARFGEF2Q9Y6D5 1785 aa15.12■□□□□ 0.01
CCDC18-208ENST00000479653 NPM3O75607 178 aaKnown RBP15.12■□□□□ 0.01
CCDC18-208ENST00000479653 GMPSP49915 693 aaPredicted RBP15.12■□□□□ 0.01
CCDC18-208ENST00000479653 RGMBQ6NW40 437 aa15.12■□□□□ 0.01
CCDC18-208ENST00000479653 USP48Q86UV5 1035 aa15.12■□□□□ 0.01
CCDC18-208ENST00000479653 RPGRQ92834 1020 aaKnown RBP15.12■□□□□ 0.01
CCDC18-208ENST00000479653 HPS5Q9UPZ3 1129 aa15.12■□□□□ 0.01
CCDC18-208ENST00000479653 USP16Q9Y5T5 823 aa15.12■□□□□ 0.01
CCDC18-208ENST00000479653 COL4A5P29400 1685 aa15.12■□□□□ 0.01
CCDC18-208ENST00000479653 CXCL9Q07325 125 aa15.11■□□□□ 0.01
CCDC18-208ENST00000479653 AOC3Q16853 763 aa15.11■□□□□ 0.01
CCDC18-208ENST00000479653 GRIPAP1Q4V328 841 aa15.11■□□□□ 0.01
CCDC18-208ENST00000479653 HABP4Q5JVS0 413 aaKnown RBP15.11■□□□□ 0.01
CCDC18-208ENST00000479653 DLK2Q6UY11 383 aa15.11■□□□□ 0.01
CCDC18-208ENST00000479653 IL17REQ8NFR9 667 aa15.11■□□□□ 0.01
CCDC18-208ENST00000479653 ZC3H15Q8WU90 426 aaKnown RBP15.11■□□□□ 0.01
CCDC18-208ENST00000479653 BCL2L13Q9BXK5 485 aa15.11■□□□□ 0.01
CCDC18-208ENST00000479653 TMX4Q9H1E5 349 aaPredicted RBP15.11■□□□□ 0.01
CCDC18-208ENST00000479653 PGAP2Q9UHJ9 254 aa15.11■□□□□ 0.01
CCDC18-208ENST00000479653 KCNQ3O43525 872 aa15.1■□□□□ 0.01
CCDC18-208ENST00000479653 ZNF157P51786 506 aaPredicted RBP15.1■□□□□ 0.01
CCDC18-208ENST00000479653 HIRAP54198 1017 aaPredicted RBP15.1■□□□□ 0.01
CCDC18-208ENST00000479653 CCDC102AQ96A19 550 aa15.1■□□□□ 0.01
CCDC18-208ENST00000479653 TRPM7Q96QT4 1865 aa15.1■□□□□ 0.01
CCDC18-208ENST00000479653 NPC1L1Q9UHC9 1359 aa15.1■□□□□ 0.01
CCDC18-208ENST00000479653 SNED1Q8TER0 1413 aa15.09■□□□□ 0.01
CCDC18-208ENST00000479653 FAM155AB1AL88 458 aaPredicted RBP15.09■□□□□ 0.01
CCDC18-208ENST00000479653 CRY2Q49AN0 593 aa15.09■□□□□ 0.01
CCDC18-208ENST00000479653 SLC51AQ86UW1 340 aa15.09■□□□□ 0.01
CCDC18-208ENST00000479653 NUTM1Q86Y26 1132 aa15.09■□□□□ 0.01
CCDC18-208ENST00000479653 ZNRF3Q9ULT6 936 aa15.09■□□□□ 0.01
CCDC18-208ENST00000479653 PRAMEF22A3QJZ6 481 aa15.08■□□□□ 0
CCDC18-208ENST00000479653 BTBD11A6QL63 1104 aa15.08■□□□□ 0
CCDC18-208ENST00000479653 GNAT3A8MTJ3 354 aa15.08■□□□□ 0
CCDC18-208ENST00000479653 PPEF1O14829 653 aaPredicted RBP15.08■□□□□ 0
CCDC18-208ENST00000479653 HLFQ16534 295 aa15.08■□□□□ 0
CCDC18-208ENST00000479653 C2orf69Q8N8R5 385 aa15.08■□□□□ 0
CCDC18-208ENST00000479653 RAD17O75943 681 aa15.07■□□□□ 0
CCDC18-208ENST00000479653 TRPM4Q8TD43 1214 aa15.07■□□□□ 0
CCDC18-208ENST00000479653 RBM17Q96I25 401 aaKnown RBP15.07■□□□□ 0
CCDC18-208ENST00000479653 NYXQ9GZU5 481 aa15.07■□□□□ 0
CCDC18-208ENST00000479653 GBA2Q9HCG7 927 aaPredicted RBP15.07■□□□□ 0
CCDC18-208ENST00000479653 HDAC9Q9UKV0 1011 aa15.07■□□□□ 0
CCDC18-208ENST00000479653 H7C1D1 291 aa15.06■□□□□ 0
CCDC18-208ENST00000479653 HOXA10P31260 410 aaPredicted RBP15.06■□□□□ 0
CCDC18-208ENST00000479653 PKN2Q16513 984 aaKnown RBP15.06■□□□□ 0
CCDC18-208ENST00000479653 CSRNP1Q96S65 589 aa15.06■□□□□ 0
CCDC18-208ENST00000479653 CNOT7Q9UIV1 285 aaKnown RBP15.06■□□□□ 0
CCDC18-208ENST00000479653 UBR2Q8IWV8 1755 aa15.06■□□□□ 0
CCDC18-208ENST00000479653 TNIP1Q15025 636 aa15.05■□□□□ -0
CCDC18-208ENST00000479653 ABCC12Q96J65 1359 aa15.04■□□□□ -0
CCDC18-208ENST00000479653 SHTN1A0MZ66 631 aa15.04■□□□□ -0
CCDC18-208ENST00000479653 DIAPH1O60610 1272 aaKnown RBP15.04■□□□□ -0
CCDC18-208ENST00000479653 SNRPA1P09661 255 aaKnown RBP15.04■□□□□ -0
CCDC18-208ENST00000479653 KRT26Q7Z3Y9 468 aa15.04■□□□□ -0
CCDC18-208ENST00000479653 NGEFQ8N5V2 710 aa15.04■□□□□ -0
CCDC18-208ENST00000479653 GAS2L2Q8NHY3 880 aa15.04■□□□□ -0
CCDC18-208ENST00000479653 CRAMP1Q96RY5 1269 aa15.04■□□□□ -0
CCDC18-208ENST00000479653 VPS33BQ9H267 617 aa15.04■□□□□ -0
CCDC18-208ENST00000479653 KNSTRNQ9Y448 316 aa15.04■□□□□ -0
CCDC18-208ENST00000479653 BCORQ6W2J9 1755 aa15.03■□□□□ -0
CCDC18-208ENST00000479653 CDHR2Q9BYE9 1310 aa15.03■□□□□ -0
CCDC18-208ENST00000479653 NBPF26B4DH59 902 aa15.03■□□□□ -0
CCDC18-208ENST00000479653 RGL2O15211 777 aa15.03■□□□□ -0
CCDC18-208ENST00000479653 NBPF10Q6P3W6 841 aaKnown RBP15.03■□□□□ -0
CCDC18-208ENST00000479653 SUPT20HQ8NEM7 779 aa15.03■□□□□ -0
CCDC18-208ENST00000479653 MICALL2Q8IY33 904 aa15.02■□□□□ -0
CCDC18-208ENST00000479653 KIF7Q2M1P5 1343 aa15.01□□□□□ -0.01
CCDC18-208ENST00000479653 ADM5C9JUS6 153 aa15.01□□□□□ -0.01
CCDC18-208ENST00000479653 SLC10A3P09131 477 aa15.01□□□□□ -0.01
CCDC18-208ENST00000479653 TBC1D10BQ4KMP7 808 aaPredicted RBP15.01□□□□□ -0.01
CCDC18-208ENST00000479653 RBM26Q5T8P6 1007 aaKnown RBP15.01□□□□□ -0.01
CCDC18-208ENST00000479653 DPP8Q6V1X1 898 aaPredicted RBP15.01□□□□□ -0.01
CCDC18-208ENST00000479653 SAMD7Q7Z3H4 446 aa15.01□□□□□ -0.01
CCDC18-208ENST00000479653 ZNF296Q8WUU4 475 aaPredicted RBP15.01□□□□□ -0.01
CCDC18-208ENST00000479653 DCPSQ96C86 337 aaKnown RBP15.01□□□□□ -0.01
CCDC18-208ENST00000479653 ATP6V0A2Q9Y487 856 aa15.01□□□□□ -0.01
CCDC18-208ENST00000479653 U2SURPO15042 1029 aaKnown RBP15□□□□□ -0.01
CCDC18-208ENST00000479653 TBC1D8O95759 1140 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms