RNA–Protein interactions for RNA: ENST00000479591.1

TM9SF4-206, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2

Gene TM9SF4, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-206ENST00000479591 ZNF34Q8IZ26 560 aa14.88□□□□□ -0.03
TM9SF4-206ENST00000479591 KAZALD1Q96I82 304 aa14.88□□□□□ -0.03
TM9SF4-206ENST00000479591 EP400Q96L91 3159 aa14.87□□□□□ -0.03
TM9SF4-206ENST00000479591 PCCAP05165 728 aaPredicted RBP14.87□□□□□ -0.03
TM9SF4-206ENST00000479591 PARP10Q53GL7 1025 aa14.87□□□□□ -0.03
TM9SF4-206ENST00000479591 ZBTB38Q8NAP3 1195 aaPredicted RBP14.87□□□□□ -0.03
TM9SF4-206ENST00000479591 BICC1Q9H694 974 aaKnown RBP14.87□□□□□ -0.03
TM9SF4-206ENST00000479591 NARFQ9UHQ1 456 aa14.87□□□□□ -0.03
TM9SF4-206ENST00000479591 UBR3Q6ZT12 1888 aa14.86□□□□□ -0.03
TM9SF4-206ENST00000479591 RABL6Q3YEC7 729 aaPredicted RBP14.86□□□□□ -0.03
TM9SF4-206ENST00000479591 CHD1LQ86WJ1 897 aa14.86□□□□□ -0.03
TM9SF4-206ENST00000479591 ZBTB47Q9UFB7 747 aaPredicted RBP14.86□□□□□ -0.03
TM9SF4-206ENST00000479591 CDHR2Q9BYE9 1310 aa14.86□□□□□ -0.03
TM9SF4-206ENST00000479591 C4AP0C0L4 1744 aa14.86□□□□□ -0.03
TM9SF4-206ENST00000479591 ZPR1O75312 459 aa14.85□□□□□ -0.03
TM9SF4-206ENST00000479591 GPTP24298 496 aa14.85□□□□□ -0.03
TM9SF4-206ENST00000479591 HSP90AB4PQ58FF6 505 aa14.85□□□□□ -0.03
TM9SF4-206ENST00000479591 TRAPPC3LQ5T215 181 aa14.85□□□□□ -0.03
TM9SF4-206ENST00000479591 ANKRD45Q5TZF3 282 aa14.85□□□□□ -0.03
TM9SF4-206ENST00000479591 PLA2G12BQ9BX93 195 aa14.85□□□□□ -0.03
TM9SF4-206ENST00000479591 RAB11FIP3O75154 756 aa14.84□□□□□ -0.03
TM9SF4-206ENST00000479591 SSFA2P28290 1259 aa14.84□□□□□ -0.03
TM9SF4-206ENST00000479591 PROM2Q8N271 834 aa14.84□□□□□ -0.03
TM9SF4-206ENST00000479591 ARHGEF1Q92888 912 aaKnown RBP14.84□□□□□ -0.03
TM9SF4-206ENST00000479591 UBN2Q6ZU65 1347 aa14.84□□□□□ -0.03
TM9SF4-206ENST00000479591 HSP90B1P14625 803 aaKnown RBP14.83□□□□□ -0.04
TM9SF4-206ENST00000479591 RFC4P35249 363 aa14.83□□□□□ -0.04
TM9SF4-206ENST00000479591 RGS3P49796 1198 aa14.83□□□□□ -0.04
TM9SF4-206ENST00000479591 FOXO4P98177 505 aa14.83□□□□□ -0.04
TM9SF4-206ENST00000479591 EPHA10Q5JZY3 1008 aa14.83□□□□□ -0.04
TM9SF4-206ENST00000479591 TRMT112Q9UI30 125 aaKnown RBP14.83□□□□□ -0.04
TM9SF4-206ENST00000479591 NIP7Q9Y221 180 aaKnown RBP eCLIP14.83□□□□□ -0.04
TM9SF4-206ENST00000479591 NOP58Q9Y2X3 529 aaKnown RBP14.83□□□□□ -0.04
TM9SF4-206ENST00000479591 SURF6O75683 361 aaKnown RBP14.82□□□□□ -0.04
TM9SF4-206ENST00000479591 USPL1Q5W0Q7 1092 aa14.82□□□□□ -0.04
TM9SF4-206ENST00000479591 JARID2Q92833 1246 aaPredicted RBP14.82□□□□□ -0.04
TM9SF4-206ENST00000479591 FAM89AQ96GI7 184 aa14.82□□□□□ -0.04
TM9SF4-206ENST00000479591 UTP14AQ9BVJ6 771 aaKnown RBP14.82□□□□□ -0.04
TM9SF4-206ENST00000479591 LNPKQ9C0E8 428 aa14.82□□□□□ -0.04
TM9SF4-206ENST00000479591 EXOC6BQ9Y2D4 811 aa14.82□□□□□ -0.04
TM9SF4-206ENST00000479591 USP42Q9H9J4 1324 aaKnown RBP14.82□□□□□ -0.04
TM9SF4-206ENST00000479591 LAMB2P55268 1798 aa14.81□□□□□ -0.04
TM9SF4-206ENST00000479591 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.81□□□□□ -0.04
TM9SF4-206ENST00000479591 RTL5Q5HYW3 569 aaPredicted RBP14.81□□□□□ -0.04
TM9SF4-206ENST00000479591 SUSD4Q5VX71 490 aa14.81□□□□□ -0.04
TM9SF4-206ENST00000479591 LMBR1LQ6UX01 489 aa14.81□□□□□ -0.04
TM9SF4-206ENST00000479591 SKAP1Q86WV1 359 aa14.81□□□□□ -0.04
TM9SF4-206ENST00000479591 ERC1Q8IUD2 1116 aa14.81□□□□□ -0.04
TM9SF4-206ENST00000479591 LRRCC1Q9C099 1032 aa14.81□□□□□ -0.04
TM9SF4-206ENST00000479591 BCL2L12Q9HB09 334 aa14.81□□□□□ -0.04
TM9SF4-206ENST00000479591 MYH3P11055 1940 aa14.81□□□□□ -0.04
TM9SF4-206ENST00000479591 SH3TC1Q8TE82 1336 aa14.81□□□□□ -0.04
TM9SF4-206ENST00000479591 COL24A1Q17RW2 1714 aa14.8□□□□□ -0.04
TM9SF4-206ENST00000479591 IRS4O14654 1257 aaPredicted RBP14.8□□□□□ -0.04
TM9SF4-206ENST00000479591 PHF14O94880 888 aa14.8□□□□□ -0.04
TM9SF4-206ENST00000479591 PDE4AP27815 886 aa14.8□□□□□ -0.04
TM9SF4-206ENST00000479591 SF3B2Q13435 895 aaKnown RBP14.8□□□□□ -0.04
TM9SF4-206ENST00000479591 AMIGO3Q86WK7 504 aa14.8□□□□□ -0.04
TM9SF4-206ENST00000479591 KIF1BPQ96EK5 621 aa14.8□□□□□ -0.04
TM9SF4-206ENST00000479591 COPRSQ9NQ92 184 aa14.8□□□□□ -0.04
TM9SF4-206ENST00000479591 PDE8AO60658 829 aa14.79□□□□□ -0.04
TM9SF4-206ENST00000479591 NTSR2O95665 410 aa14.79□□□□□ -0.04
TM9SF4-206ENST00000479591 CSF1RP07333 972 aa14.79□□□□□ -0.04
TM9SF4-206ENST00000479591 FLAD1Q8NFF5 587 aa14.79□□□□□ -0.04
TM9SF4-206ENST00000479591 AKT1S1Q96B36 256 aa14.79□□□□□ -0.04
TM9SF4-206ENST00000479591 NYXQ9GZU5 481 aa14.79□□□□□ -0.04
TM9SF4-206ENST00000479591 SRP68Q9UHB9 627 aaKnown RBP14.79□□□□□ -0.04
TM9SF4-206ENST00000479591 BAG6P46379 1132 aa14.78□□□□□ -0.04
TM9SF4-206ENST00000479591 RFX5P48382 616 aaPredicted RBP14.78□□□□□ -0.04
TM9SF4-206ENST00000479591 G3BP1Q13283 466 aaKnown RBP eCLIP14.78□□□□□ -0.04
TM9SF4-206ENST00000479591 OS9Q13438 667 aaPredicted RBP14.78□□□□□ -0.04
TM9SF4-206ENST00000479591 TBC1D9BQ66K14 1250 aa14.78□□□□□ -0.04
TM9SF4-206ENST00000479591 SMIM5Q71RC9 77 aa14.78□□□□□ -0.04
TM9SF4-206ENST00000479591 UPF1Q92900 1129 aaKnown RBP eCLIP14.78□□□□□ -0.042e-54■■■■■ 95.7
TM9SF4-206ENST00000479591 SETDB2Q96T68 719 aa14.78□□□□□ -0.04
TM9SF4-206ENST00000479591 DDX60Q8IY21 1712 aaKnown RBP14.78□□□□□ -0.04
TM9SF4-206ENST00000479591 APBB1O00213 710 aa14.77□□□□□ -0.05
TM9SF4-206ENST00000479591 CTSWP56202 376 aa14.77□□□□□ -0.05
TM9SF4-206ENST00000479591 PTPN12Q05209 780 aaKnown RBP14.77□□□□□ -0.05
TM9SF4-206ENST00000479591 CCDC125Q86Z20 511 aa14.77□□□□□ -0.05
TM9SF4-206ENST00000479591 RHPN1Q8TCX5 695 aa14.77□□□□□ -0.05
TM9SF4-206ENST00000479591 CAMKK2Q96RR4 588 aa14.77□□□□□ -0.05
TM9SF4-206ENST00000479591 TFCP2L1Q9NZI6 479 aa14.77□□□□□ -0.05
TM9SF4-206ENST00000479591 PA2G4Q9UQ80 394 aaKnown RBP14.77□□□□□ -0.05
TM9SF4-206ENST00000479591 CHMP3Q9Y3E7 222 aa14.77□□□□□ -0.05
TM9SF4-206ENST00000479591 TUBGCP6Q96RT7 1819 aa14.76□□□□□ -0.05
TM9SF4-206ENST00000479591 SMARCA5O60264 1052 aaPredicted RBP14.76□□□□□ -0.05
TM9SF4-206ENST00000479591 ZNF827Q17R98 1081 aa14.76□□□□□ -0.05
TM9SF4-206ENST00000479591 CCDC57Q2TAC2 916 aa14.76□□□□□ -0.05
TM9SF4-206ENST00000479591 TTLL11Q8NHH1 800 aa14.76□□□□□ -0.05
TM9SF4-206ENST00000479591 FBXO3Q9UK99 471 aa14.76□□□□□ -0.05
TM9SF4-206ENST00000479591 CARMIL3Q8ND23 1372 aa14.75□□□□□ -0.05
TM9SF4-206ENST00000479591 FAM177BA6PVY3 158 aa14.75□□□□□ -0.05
TM9SF4-206ENST00000479591 EN1Q05925 392 aaPredicted RBP14.75□□□□□ -0.05
TM9SF4-206ENST00000479591 IFIT5Q13325 482 aaKnown RBP14.75□□□□□ -0.05
TM9SF4-206ENST00000479591 EZH2Q15910 746 aaKnown RBP14.75□□□□□ -0.05
TM9SF4-206ENST00000479591 TPTE2Q6XPS3 522 aa14.75□□□□□ -0.05
TM9SF4-206ENST00000479591 SYNE4Q8N205 404 aa14.75□□□□□ -0.05
TM9SF4-206ENST00000479591 QSER1Q2KHR3 1735 aa14.75□□□□□ -0.05
TM9SF4-206ENST00000479591 GYS1P13807 737 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms