RNA–Protein interactions for RNA: ENST00000479535.2

SYCE1-205, Transcript of synaptonemal complex central element protein 1, humanhuman

TSL 5

Gene SYCE1, Length 2,479 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE1-205ENST00000479535 CASP7P55210 303 aa16.22■□□□□ 0.19
SYCE1-205ENST00000479535 EVA1CP58658 441 aa16.22■□□□□ 0.19
SYCE1-205ENST00000479535 ABCA3Q99758 1704 aa16.22■□□□□ 0.19
SYCE1-205ENST00000479535 ERBB4Q15303 1308 aa16.21■□□□□ 0.19
SYCE1-205ENST00000479535 TTLL7Q6ZT98 887 aa16.21■□□□□ 0.19
SYCE1-205ENST00000479535 INTS4Q96HW7 963 aaKnown RBP16.21■□□□□ 0.19
SYCE1-205ENST00000479535 AFDNP55196 1824 aaKnown RBP16.21■□□□□ 0.19
SYCE1-205ENST00000479535 KCPQ6ZWJ8 1503 aa16.21■□□□□ 0.19
SYCE1-205ENST00000479535 COL15A1P39059 1388 aa16.2■□□□□ 0.18
SYCE1-205ENST00000479535 FOXD4L5Q5VV16 416 aaPredicted RBP16.2■□□□□ 0.18
SYCE1-205ENST00000479535 FOXD4L4Q8WXT5 416 aaPredicted RBP16.2■□□□□ 0.18
SYCE1-205ENST00000479535 CHAMP1Q96JM3 812 aa16.2■□□□□ 0.18
SYCE1-205ENST00000479535 FAM227BQ96M60 508 aa16.2■□□□□ 0.18
SYCE1-205ENST00000479535 DDX49Q9Y6V7 483 aaKnown RBP16.2■□□□□ 0.18
SYCE1-205ENST00000479535 TTC14Q96N46 770 aa16.2■□□□□ 0.18
SYCE1-205ENST00000479535 PANK2Q9BZ23 570 aa16.2■□□□□ 0.18
SYCE1-205ENST00000479535 LMBRD1Q9NUN5 540 aa16.2■□□□□ 0.18
SYCE1-205ENST00000479535 UBR2Q8IWV8 1755 aa16.19■□□□□ 0.18
SYCE1-205ENST00000479535 TFCP2Q12800 502 aa16.19■□□□□ 0.18
SYCE1-205ENST00000479535 KLHL40Q2TBA0 621 aa16.19■□□□□ 0.18
SYCE1-205ENST00000479535 SHANK3Q9BYB0 1731 aa16.19■□□□□ 0.18
SYCE1-205ENST00000479535 NMIQ13287 307 aaPredicted RBP16.19■□□□□ 0.18
SYCE1-205ENST00000479535 GAS2L3Q86XJ1 694 aa16.19■□□□□ 0.18
SYCE1-205ENST00000479535 CPA1P15085 419 aa16.18■□□□□ 0.18
SYCE1-205ENST00000479535 MRE11P49959 708 aa16.18■□□□□ 0.18
SYCE1-205ENST00000479535 PRPF40BQ6NWY9 871 aaKnown RBP16.18■□□□□ 0.18
SYCE1-205ENST00000479535 LMBR1LQ6UX01 489 aa16.18■□□□□ 0.18
SYCE1-205ENST00000479535 DBNLQ9UJU6 430 aaKnown RBP16.18■□□□□ 0.18
SYCE1-205ENST00000479535 H7C1W4 665 aa16.18■□□□□ 0.18
SYCE1-205ENST00000479535 BRD1O95696 1058 aa16.18■□□□□ 0.18
SYCE1-205ENST00000479535 AK2P54819 239 aa16.18■□□□□ 0.18
SYCE1-205ENST00000479535 TNNI3KQ59H18 835 aa16.18■□□□□ 0.18
SYCE1-205ENST00000479535 LARP6Q9BRS8 491 aaKnown RBP16.18■□□□□ 0.18
SYCE1-205ENST00000479535 FSD1Q9BTV5 496 aa16.18■□□□□ 0.18
SYCE1-205ENST00000479535 ZBTB3Q9H5J0 574 aa16.18■□□□□ 0.18
SYCE1-205ENST00000479535 GRPEL1Q9HAV7 217 aa16.18■□□□□ 0.18
SYCE1-205ENST00000479535 FPGT-TNNI3KV9GXZ4 949 aa16.18■□□□□ 0.18
SYCE1-205ENST00000479535 PAPPAQ13219 1627 aa16.17■□□□□ 0.18
SYCE1-205ENST00000479535 CASTP20810 708 aaKnown RBP16.17■□□□□ 0.18
SYCE1-205ENST00000479535 FOXO4P98177 505 aa16.17■□□□□ 0.18
SYCE1-205ENST00000479535 ADCK5Q3MIX3 580 aa16.17■□□□□ 0.18
SYCE1-205ENST00000479535 CCDC171Q6TFL3 1326 aa16.17■□□□□ 0.18
SYCE1-205ENST00000479535 HIP1O00291 1037 aa16.17■□□□□ 0.18
SYCE1-205ENST00000479535 EDC3Q96F86 508 aaKnown RBP16.17■□□□□ 0.18
SYCE1-205ENST00000479535 TNS2Q63HR2 1409 aa16.16■□□□□ 0.18
SYCE1-205ENST00000479535 A0A0D9SFI3 127 aa16.16■□□□□ 0.18
SYCE1-205ENST00000479535 PRPF40AO75400 957 aaKnown RBP16.16■□□□□ 0.18
SYCE1-205ENST00000479535 NECTIN1Q15223 517 aa16.16■□□□□ 0.18
SYCE1-205ENST00000479535 RUFY3Q7L099 469 aa16.16■□□□□ 0.18
SYCE1-205ENST00000479535 CWC25Q9NXE8 425 aaPredicted RBP16.16■□□□□ 0.18
SYCE1-205ENST00000479535 ISY1Q9ULR0 285 aaKnown RBP16.16■□□□□ 0.18
SYCE1-205ENST00000479535 KCNB2Q92953 911 aa16.16■□□□□ 0.18
SYCE1-205ENST00000479535 CHMP3Q9Y3E7 222 aa16.16■□□□□ 0.18
SYCE1-205ENST00000479535 JAKMIP1Q96N16 626 aaKnown RBP16.15■□□□□ 0.18
SYCE1-205ENST00000479535 RBM8AQ9Y5S9 174 aaKnown RBP16.15■□□□□ 0.18
SYCE1-205ENST00000479535 NHSL1Q5SYE7 1610 aa16.15■□□□□ 0.18
SYCE1-205ENST00000479535 MAP4K1Q92918 833 aa16.14■□□□□ 0.18
SYCE1-205ENST00000479535 SNRKQ9NRH2 765 aa16.14■□□□□ 0.18
SYCE1-205ENST00000479535 TMOD3Q9NYL9 352 aa16.14■□□□□ 0.18
SYCE1-205ENST00000479535 LIMCH1Q9UPQ0 1083 aa16.14■□□□□ 0.18
SYCE1-205ENST00000479535 NDUFB9Q9Y6M9 179 aa16.14■□□□□ 0.18
SYCE1-205ENST00000479535 NUP188Q5SRE5 1749 aa16.14■□□□□ 0.17
SYCE1-205ENST00000479535 ATP5JP18859 108 aa16.14■□□□□ 0.17
SYCE1-205ENST00000479535 NCLP19338 710 aaKnown RBP16.14■□□□□ 0.17
SYCE1-205ENST00000479535 DBNDD2Q9BQY9 259 aa16.14■□□□□ 0.17
SYCE1-205ENST00000479535 BTG4Q9NY30 223 aa16.14■□□□□ 0.17
SYCE1-205ENST00000479535 TOGARAM1Q9Y4F4 1720 aa16.14■□□□□ 0.17
SYCE1-205ENST00000479535 KCNJ4P48050 445 aa16.13■□□□□ 0.17
SYCE1-205ENST00000479535 CREB3L3Q68CJ9 461 aa16.13■□□□□ 0.17
SYCE1-205ENST00000479535 CAVIN1Q6NZI2 390 aaKnown RBP16.13■□□□□ 0.17
SYCE1-205ENST00000479535 ZSWIM6Q9HCJ5 1215 aa16.13■□□□□ 0.17
SYCE1-205ENST00000479535 MED23Q9ULK4 1368 aa16.13■□□□□ 0.17
SYCE1-205ENST00000479535 ZNF589Q86UQ0 364 aaPredicted RBP16.12■□□□□ 0.17
SYCE1-205ENST00000479535 CCDC191Q8NCU4 936 aa16.12■□□□□ 0.17
SYCE1-205ENST00000479535 GPT2Q8TD30 523 aa16.12■□□□□ 0.17
SYCE1-205ENST00000479535 TM6SF1Q9BZW5 370 aa16.12■□□□□ 0.17
SYCE1-205ENST00000479535 ASAP1Q9ULH1 1129 aa16.12■□□□□ 0.17
SYCE1-205ENST00000479535 LARGE1O95461 756 aa16.12■□□□□ 0.17
SYCE1-205ENST00000479535 ZKSCAN1P17029 563 aaPredicted RBP16.12■□□□□ 0.17
SYCE1-205ENST00000479535 PIGBQ92521 554 aa16.12■□□□□ 0.17
SYCE1-205ENST00000479535 PDRG1Q9NUG6 133 aa16.12■□□□□ 0.17
SYCE1-205ENST00000479535 ZNF330Q9Y3S2 320 aaPredicted RBP16.12■□□□□ 0.17
SYCE1-205ENST00000479535 TJP1Q07157 1748 aa16.12■□□□□ 0.17
SYCE1-205ENST00000479535 VPS53Q5VIR6 699 aa16.11■□□□□ 0.17
SYCE1-205ENST00000479535 ATG9AQ7Z3C6 839 aa16.11■□□□□ 0.17
SYCE1-205ENST00000479535 SLC27A2O14975 620 aa16.11■□□□□ 0.17
SYCE1-205ENST00000479535 COL9A3Q14050 684 aaPredicted RBP16.11■□□□□ 0.17
SYCE1-205ENST00000479535 CYP46A1Q9Y6A2 500 aa16.11■□□□□ 0.17
SYCE1-205ENST00000479535 RPAP1Q9BWH6 1393 aaPredicted RBP16.11■□□□□ 0.17
SYCE1-205ENST00000479535 CHGBP05060 677 aa16.1■□□□□ 0.17
SYCE1-205ENST00000479535 DNAJC2Q99543 621 aaKnown RBP16.1■□□□□ 0.17
SYCE1-205ENST00000479535 CCDC9Q9Y3X0 531 aaKnown RBP16.1■□□□□ 0.17
SYCE1-205ENST00000479535 DNAJC10Q8IXB1 793 aa16.1■□□□□ 0.17
SYCE1-205ENST00000479535 ZSCAN23Q3MJ62 389 aa16.09■□□□□ 0.17
SYCE1-205ENST00000479535 FOXD4L6Q3SYB3 417 aaPredicted RBP16.09■□□□□ 0.17
SYCE1-205ENST00000479535 FOXD4L3Q6VB84 417 aaPredicted RBP16.09■□□□□ 0.17
SYCE1-205ENST00000479535 ZNF594Q96JF6 807 aaPredicted RBP16.09■□□□□ 0.17
SYCE1-205ENST00000479535 HAUS7Q99871 368 aa16.09■□□□□ 0.17
SYCE1-205ENST00000479535 NSFL1CQ9UNZ2 370 aaKnown RBP16.09■□□□□ 0.17
SYCE1-205ENST00000479535 TAF6LQ9Y6J9 622 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms