RNA–Protein interactions for RNA: ENST00000479412.2

NOTCH2-203, Transcript of notch 2, humanhuman

TSL 1 (best)

Gene NOTCH2, Length 3,221 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH2-203ENST00000479412 MYD88Q99836 296 aa16.56■□□□□ 0.24
NOTCH2-203ENST00000479412 LMTK3Q96Q04 1460 aa16.56■□□□□ 0.24
NOTCH2-203ENST00000479412 HCLS1P14317 486 aaPredicted RBP16.56■□□□□ 0.24
NOTCH2-203ENST00000479412 ZDHHC9Q9Y397 364 aa16.56■□□□□ 0.24
NOTCH2-203ENST00000479412 BMP2KLQ5H9B9 411 aa16.55■□□□□ 0.24
NOTCH2-203ENST00000479412 NPHP1O15259 732 aa16.55■□□□□ 0.24
NOTCH2-203ENST00000479412 DTNBO60941 627 aa16.55■□□□□ 0.24
NOTCH2-203ENST00000479412 A1BGP04217 495 aa16.55■□□□□ 0.24
NOTCH2-203ENST00000479412 ZNF592Q92610 1267 aa16.55■□□□□ 0.24
NOTCH2-203ENST00000479412 ZCRB1Q8TBF4 217 aaKnown RBP16.55■□□□□ 0.24
NOTCH2-203ENST00000479412 LRRCC1Q9C099 1032 aa16.55■□□□□ 0.24
NOTCH2-203ENST00000479412 ZBTB3Q9H5J0 574 aa16.55■□□□□ 0.24
NOTCH2-203ENST00000479412 BEND3Q5T5X7 828 aa16.54■□□□□ 0.24
NOTCH2-203ENST00000479412 SOS1Q07889 1333 aaPredicted RBP16.54■□□□□ 0.24
NOTCH2-203ENST00000479412 GADD45BO75293 160 aaPredicted RBP16.54■□□□□ 0.24
NOTCH2-203ENST00000479412 RABEP1Q15276 862 aa16.54■□□□□ 0.24
NOTCH2-203ENST00000479412 TAF3Q5VWG9 929 aa16.54■□□□□ 0.24
NOTCH2-203ENST00000479412 DIAPH3Q9NSV4 1193 aa16.54■□□□□ 0.24
NOTCH2-203ENST00000479412 VIRMAQ69YN4 1812 aaKnown RBP16.54■□□□□ 0.24
NOTCH2-203ENST00000479412 TTC22Q5TAA0 569 aa16.53■□□□□ 0.24
NOTCH2-203ENST00000479412 UNC5CLQ8IV45 518 aa16.53■□□□□ 0.24
NOTCH2-203ENST00000479412 CDC45O75419 566 aa16.53■□□□□ 0.24
NOTCH2-203ENST00000479412 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.53■□□□□ 0.24
NOTCH2-203ENST00000479412 PYCARDQ9ULZ3 195 aa16.53■□□□□ 0.24
NOTCH2-203ENST00000479412 V9GYY5 206 aaPredicted RBP16.53■□□□□ 0.24
NOTCH2-203ENST00000479412 TRIM34Q9BYJ4 488 aa16.53■□□□□ 0.24
NOTCH2-203ENST00000479412 EP400Q96L91 3159 aa16.52■□□□□ 0.24
NOTCH2-203ENST00000479412 ADCY9O60503 1353 aa16.52■□□□□ 0.24
NOTCH2-203ENST00000479412 CLEC17AQ6ZS10 378 aa16.52■□□□□ 0.24
NOTCH2-203ENST00000479412 KDM6AO15550 1401 aaPredicted RBP16.52■□□□□ 0.24
NOTCH2-203ENST00000479412 ST18O60284 1047 aa16.52■□□□□ 0.23
NOTCH2-203ENST00000479412 PDE1AP54750 535 aa16.51■□□□□ 0.23
NOTCH2-203ENST00000479412 ATP8B2P98198 1209 aa16.51■□□□□ 0.23
NOTCH2-203ENST00000479412 C16orf45Q96MC5 204 aaPredicted RBP16.51■□□□□ 0.23
NOTCH2-203ENST00000479412 UBE3BQ7Z3V4 1068 aa16.51■□□□□ 0.23
NOTCH2-203ENST00000479412 OGFRQ9NZT2 677 aa16.51■□□□□ 0.23
NOTCH2-203ENST00000479412 NDUFB9Q9Y6M9 179 aa16.51■□□□□ 0.23
NOTCH2-203ENST00000479412 MBD3O95983 291 aa16.5■□□□□ 0.23
NOTCH2-203ENST00000479412 DCAF5Q96JK2 942 aa16.5■□□□□ 0.23
NOTCH2-203ENST00000479412 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.5■□□□□ 0.23
NOTCH2-203ENST00000479412 MX1P20591 662 aa16.5■□□□□ 0.23
NOTCH2-203ENST00000479412 IL2RBP14784 551 aa16.49■□□□□ 0.23
NOTCH2-203ENST00000479412 NEK4P51957 841 aa16.49■□□□□ 0.23
NOTCH2-203ENST00000479412 KSR2Q6VAB6 950 aa16.49■□□□□ 0.23
NOTCH2-203ENST00000479412 SYAP1Q96A49 352 aaPredicted RBP16.49■□□□□ 0.23
NOTCH2-203ENST00000479412 ACSBG1Q96GR2 724 aa16.49■□□□□ 0.23
NOTCH2-203ENST00000479412 SUCLG2Q96I99 432 aa16.49■□□□□ 0.23
NOTCH2-203ENST00000479412 BICC1Q9H694 974 aaKnown RBP16.49■□□□□ 0.23
NOTCH2-203ENST00000479412 PDIA6Q15084 440 aa16.49■□□□□ 0.23
NOTCH2-203ENST00000479412 TTLL7Q6ZT98 887 aa16.49■□□□□ 0.23
NOTCH2-203ENST00000479412 ASAP1Q9ULH1 1129 aa16.49■□□□□ 0.23
NOTCH2-203ENST00000479412 WDR17Q8IZU2 1322 aa16.49■□□□□ 0.23
NOTCH2-203ENST00000479412 GTF2F1P35269 517 aaKnown RBP eCLIP16.49■□□□□ 0.23
NOTCH2-203ENST00000479412 CCDC8Q9H0W5 538 aaPredicted RBP16.49■□□□□ 0.23
NOTCH2-203ENST00000479412 CYP2E1P05181 493 aaPredicted RBP16.48■□□□□ 0.23
NOTCH2-203ENST00000479412 TIGD1Q96MW7 591 aa16.48■□□□□ 0.23
NOTCH2-203ENST00000479412 DRC7Q8IY82 874 aa16.48■□□□□ 0.23
NOTCH2-203ENST00000479412 CHMP4CQ96CF2 233 aa16.48■□□□□ 0.23
NOTCH2-203ENST00000479412 FMNL2Q96PY5 1086 aa16.48■□□□□ 0.23
NOTCH2-203ENST00000479412 ANO2Q9NQ90 1003 aa16.48■□□□□ 0.23
NOTCH2-203ENST00000479412 DDX21Q9NR30 783 aaKnown RBP eCLIP16.48■□□□□ 0.23
NOTCH2-203ENST00000479412 IGKV5-2P06315 115 aa16.47■□□□□ 0.23
NOTCH2-203ENST00000479412 LARP6Q9BRS8 491 aaKnown RBP16.47■□□□□ 0.23
NOTCH2-203ENST00000479412 CWC22Q9HCG8 908 aaKnown RBP16.47■□□□□ 0.23
NOTCH2-203ENST00000479412 SNRPA1P09661 255 aaKnown RBP16.47■□□□□ 0.23
NOTCH2-203ENST00000479412 TNNT3P45378 269 aaPredicted RBP16.47■□□□□ 0.23
NOTCH2-203ENST00000479412 EPHA10Q5JZY3 1008 aa16.47■□□□□ 0.23
NOTCH2-203ENST00000479412 ANKRD13DQ6ZTN6 518 aa16.47■□□□□ 0.23
NOTCH2-203ENST00000479412 CCDC66A2RUB6 948 aa16.47■□□□□ 0.23
NOTCH2-203ENST00000479412 KCNQ4P56696 695 aa16.47■□□□□ 0.23
NOTCH2-203ENST00000479412 NEXNQ0ZGT2 675 aa16.47■□□□□ 0.23
NOTCH2-203ENST00000479412 RHPN1Q8TCX5 695 aa16.47■□□□□ 0.23
NOTCH2-203ENST00000479412 ST7Q9NRC1 585 aa16.47■□□□□ 0.23
NOTCH2-203ENST00000479412 SOS2Q07890 1332 aaPredicted RBP16.47■□□□□ 0.23
NOTCH2-203ENST00000479412 SLIT3O75094 1523 aa16.46■□□□□ 0.23
NOTCH2-203ENST00000479412 SLFN14P0C7P3 912 aa16.46■□□□□ 0.23
NOTCH2-203ENST00000479412 DDX58O95786 925 aaKnown RBP16.46■□□□□ 0.23
NOTCH2-203ENST00000479412 HYPKQ9NX55 129 aa16.46■□□□□ 0.23
NOTCH2-203ENST00000479412 CAMTA1Q9Y6Y1 1673 aa16.46■□□□□ 0.23
NOTCH2-203ENST00000479412 NCBP1Q09161 790 aaKnown RBP16.45■□□□□ 0.22
NOTCH2-203ENST00000479412 FAM182BQ5T319 152 aa16.45■□□□□ 0.22
NOTCH2-203ENST00000479412 IL25Q9H293 177 aa16.45■□□□□ 0.22
NOTCH2-203ENST00000479412 GRM8O00222 908 aa16.45■□□□□ 0.22
NOTCH2-203ENST00000479412 FEZ1Q99689 392 aa16.45■□□□□ 0.22
NOTCH2-203ENST00000479412 TRPM3Q9HCF6 1732 aaPredicted RBP16.45■□□□□ 0.22
NOTCH2-203ENST00000479412 GIMAP6Q6P9H5 292 aa16.45■□□□□ 0.22
NOTCH2-203ENST00000479412 USP48Q86UV5 1035 aa16.45■□□□□ 0.22
NOTCH2-203ENST00000479412 A0A087WZG4 1122 aa16.44■□□□□ 0.22
NOTCH2-203ENST00000479412 USP26Q9BXU7 913 aa16.44■□□□□ 0.22
NOTCH2-203ENST00000479412 TMX1Q9H3N1 280 aa16.44■□□□□ 0.22
NOTCH2-203ENST00000479412 GPTP24298 496 aa16.44■□□□□ 0.22
NOTCH2-203ENST00000479412 SRCAPQ6ZRS2 3230 aa16.44■□□□□ 0.22
NOTCH2-203ENST00000479412 NBPF26B4DH59 902 aa16.43■□□□□ 0.22
NOTCH2-203ENST00000479412 NBPF14Q5TI25 921 aa16.43■□□□□ 0.22
NOTCH2-203ENST00000479412 NBPF10Q6P3W6 841 aaKnown RBP16.43■□□□□ 0.22
NOTCH2-203ENST00000479412 AACSQ86V21 672 aa16.43■□□□□ 0.22
NOTCH2-203ENST00000479412 NBPF15Q8N660 670 aa16.43■□□□□ 0.22
NOTCH2-203ENST00000479412 TLR7Q9NYK1 1049 aaKnown RBP16.43■□□□□ 0.22
NOTCH2-203ENST00000479412 TMOD3Q9NYL9 352 aa16.43■□□□□ 0.22
NOTCH2-203ENST00000479412 IRX3P78415 501 aaPredicted RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms