RNA–Protein interactions for RNA: ENST00000479341.1

RUNX3-204, Transcript of runt related transcription factor 3, humanhuman

TSL 1 (best)

Gene RUNX3, Length 284 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-204ENST00000479341 MTFR1LQ9H019 292 aa23.54■■□□□ 1.36
RUNX3-204ENST00000479341 CWC25Q9NXE8 425 aaPredicted RBP23.54■■□□□ 1.36
RUNX3-204ENST00000479341 PPP1R1BQ9UD71 204 aaPredicted RBP23.54■■□□□ 1.36
RUNX3-204ENST00000479341 N4BP2Q86UW6 1770 aaPredicted RBP23.53■■□□□ 1.36
RUNX3-204ENST00000479341 ZBTB7AO95365 584 aa23.53■■□□□ 1.36
RUNX3-204ENST00000479341 SPON1Q9HCB6 807 aa23.53■■□□□ 1.36
RUNX3-204ENST00000479341 POLRMTO00411 1230 aaKnown RBP23.52■■□□□ 1.36
RUNX3-204ENST00000479341 MMP10P09238 476 aa23.52■■□□□ 1.36
RUNX3-204ENST00000479341 CARMIL3Q8ND23 1372 aa23.52■■□□□ 1.36
RUNX3-204ENST00000479341 MVPQ14764 893 aaKnown RBP23.51■■□□□ 1.35
RUNX3-204ENST00000479341 PPP1R42Q7Z4L9 355 aa23.51■■□□□ 1.35
RUNX3-204ENST00000479341 UTP14AQ9BVJ6 771 aaKnown RBP23.51■■□□□ 1.35
RUNX3-204ENST00000479341 COG6Q9Y2V7 657 aa23.51■■□□□ 1.35
RUNX3-204ENST00000479341 COL24A1Q17RW2 1714 aa23.5■■□□□ 1.35
RUNX3-204ENST00000479341 H7C1W4 665 aa23.5■■□□□ 1.35
RUNX3-204ENST00000479341 NTSR2O95665 410 aa23.5■■□□□ 1.35
RUNX3-204ENST00000479341 SERPINB2P05120 415 aa23.5■■□□□ 1.35
RUNX3-204ENST00000479341 ITPRIPQ8IWB1 547 aa23.5■■□□□ 1.35
RUNX3-204ENST00000479341 USP44Q9H0E7 712 aa23.5■■□□□ 1.35
RUNX3-204ENST00000479341 PCCAP05165 728 aaPredicted RBP23.49■■□□□ 1.35
RUNX3-204ENST00000479341 ZBTB38Q8NAP3 1195 aaPredicted RBP23.49■■□□□ 1.35
RUNX3-204ENST00000479341 ATF5Q9Y2D1 282 aaPredicted RBP23.49■■□□□ 1.35
RUNX3-204ENST00000479341 UTYO14607 1347 aa23.49■■□□□ 1.35
RUNX3-204ENST00000479341 AFDNP55196 1824 aaKnown RBP23.49■■□□□ 1.35
RUNX3-204ENST00000479341 FAM177BA6PVY3 158 aa23.48■■□□□ 1.35
RUNX3-204ENST00000479341 GRM8O00222 908 aa23.48■■□□□ 1.35
RUNX3-204ENST00000479341 CASP7P55210 303 aa23.48■■□□□ 1.35
RUNX3-204ENST00000479341 TPTE2Q6XPS3 522 aa23.48■■□□□ 1.35
RUNX3-204ENST00000479341 NBPF5PQ86XG9 351 aaPredicted RBP23.48■■□□□ 1.35
RUNX3-204ENST00000479341 NYXQ9GZU5 481 aa23.48■■□□□ 1.35
RUNX3-204ENST00000479341 TRMT112Q9UI30 125 aaKnown RBP23.48■■□□□ 1.35
RUNX3-204ENST00000479341 PARP3Q9Y6F1 533 aa23.48■■□□□ 1.35
RUNX3-204ENST00000479341 ZBTB7BO15156 539 aaPredicted RBP23.47■■□□□ 1.35
RUNX3-204ENST00000479341 SGIP1Q9BQI5 828 aa23.47■■□□□ 1.35
RUNX3-204ENST00000479341 C9orf78Q9NZ63 289 aaPredicted RBP23.47■■□□□ 1.35
RUNX3-204ENST00000479341 SYNE4Q8N205 404 aa23.46■■□□□ 1.35
RUNX3-204ENST00000479341 SH3TC1Q8TE82 1336 aa23.46■■□□□ 1.35
RUNX3-204ENST00000479341 JARID2Q92833 1246 aaPredicted RBP23.46■■□□□ 1.35
RUNX3-204ENST00000479341 FAM89AQ96GI7 184 aa23.46■■□□□ 1.35
RUNX3-204ENST00000479341 CRBNQ96SW2 442 aa23.46■■□□□ 1.35
RUNX3-204ENST00000479341 MEIS3Q99687 375 aa23.46■■□□□ 1.35
RUNX3-204ENST00000479341 DDX19BQ9UMR2 479 aa23.46■■□□□ 1.35
RUNX3-204ENST00000479341 NBPF7P0C2Y1 421 aaPredicted RBP23.45■■□□□ 1.34
RUNX3-204ENST00000479341 SLC10A5Q5PT55 438 aa23.45■■□□□ 1.34
RUNX3-204ENST00000479341 PRR5LQ6MZQ0 368 aa23.45■■□□□ 1.34
RUNX3-204ENST00000479341 NUTM1Q86Y26 1132 aa23.45■■□□□ 1.34
RUNX3-204ENST00000479341 NRXN2Q9P2S2 1712 aa23.45■■□□□ 1.34
RUNX3-204ENST00000479341 CDHR2Q9BYE9 1310 aa23.44■■□□□ 1.34
RUNX3-204ENST00000479341 DCAF8L1A6NGE4 600 aa23.44■■□□□ 1.34
RUNX3-204ENST00000479341 PTGER2P43116 358 aa23.44■■□□□ 1.34
RUNX3-204ENST00000479341 ERFEQ4G0M1 354 aa23.44■■□□□ 1.34
RUNX3-204ENST00000479341 UBE3BQ7Z3V4 1068 aa23.44■■□□□ 1.34
RUNX3-204ENST00000479341 CNBD1Q8NA66 436 aa23.44■■□□□ 1.34
RUNX3-204ENST00000479341 POLD1P28340 1107 aa23.43■■□□□ 1.34
RUNX3-204ENST00000479341 RTL5Q5HYW3 569 aaPredicted RBP23.43■■□□□ 1.34
RUNX3-204ENST00000479341 GNAI3P08754 354 aa23.42■■□□□ 1.34
RUNX3-204ENST00000479341 GTF2E1P29083 439 aaPredicted RBP23.42■■□□□ 1.34
RUNX3-204ENST00000479341 ABCC12Q96J65 1359 aa23.41■■□□□ 1.34
RUNX3-204ENST00000479341 IRS4O14654 1257 aaPredicted RBP23.41■■□□□ 1.34
RUNX3-204ENST00000479341 UBTFL1P0CB47 393 aaPredicted RBP23.41■■□□□ 1.34
RUNX3-204ENST00000479341 IRX6P78412 446 aaPredicted RBP23.41■■□□□ 1.34
RUNX3-204ENST00000479341 CHMP4BQ9H444 224 aaKnown RBP23.41■■□□□ 1.34
RUNX3-204ENST00000479341 ZBTB40Q9NUA8 1239 aa23.41■■□□□ 1.34
RUNX3-204ENST00000479341 CCDC24Q8N4L8 307 aa23.4■■□□□ 1.34
RUNX3-204ENST00000479341 KAZALD1Q96I82 304 aa23.4■■□□□ 1.34
RUNX3-204ENST00000479341 SUCLG2Q96I99 432 aa23.4■■□□□ 1.34
RUNX3-204ENST00000479341 PLA2G12BQ9BX93 195 aa23.4■■□□□ 1.34
RUNX3-204ENST00000479341 HCLS1P14317 486 aaPredicted RBP23.39■■□□□ 1.33
RUNX3-204ENST00000479341 ST5P78524 1137 aa23.39■■□□□ 1.33
RUNX3-204ENST00000479341 NPHP1O15259 732 aa23.38■■□□□ 1.33
RUNX3-204ENST00000479341 EXOC6Q8TAG9 804 aa23.38■■□□□ 1.33
RUNX3-204ENST00000479341 HDAC5Q9UQL6 1122 aa23.38■■□□□ 1.33
RUNX3-204ENST00000479341 RIC1Q4ADV7 1423 aa23.38■■□□□ 1.33
RUNX3-204ENST00000479341 PDE8AO60658 829 aa23.37■■□□□ 1.33
RUNX3-204ENST00000479341 GNAI2P04899 355 aa23.37■■□□□ 1.33
RUNX3-204ENST00000479341 HSP90B1P14625 803 aaKnown RBP23.37■■□□□ 1.33
RUNX3-204ENST00000479341 YY1P25490 414 aa23.37■■□□□ 1.33
RUNX3-204ENST00000479341 FOXO4P98177 505 aa23.37■■□□□ 1.33
RUNX3-204ENST00000479341 EPHA10Q5JZY3 1008 aa23.37■■□□□ 1.33
RUNX3-204ENST00000479341 BRIP1Q9BX63 1249 aa23.37■■□□□ 1.33
RUNX3-204ENST00000479341 LRRFIP2Q9Y608 721 aaKnown RBP23.36■■□□□ 1.33
RUNX3-204ENST00000479341 C3orf67Q6ZVT6 689 aa23.35■■□□□ 1.33
RUNX3-204ENST00000479341 DDX60Q8IY21 1712 aaKnown RBP23.35■■□□□ 1.33
RUNX3-204ENST00000479341 C10orf71Q711Q0 1435 aa23.34■■□□□ 1.33
RUNX3-204ENST00000479341 KLRG2A4D1S0 409 aaPredicted RBP23.34■■□□□ 1.33
RUNX3-204ENST00000479341 CSF1RP07333 972 aa23.34■■□□□ 1.33
RUNX3-204ENST00000479341 SF3B3Q15393 1217 aaKnown RBP23.34■■□□□ 1.33
RUNX3-204ENST00000479341 RABL6Q3YEC7 729 aaPredicted RBP23.34■■□□□ 1.33
RUNX3-204ENST00000479341 ANKRD44Q8N8A2 993 aa23.34■■□□□ 1.33
RUNX3-204ENST00000479341 NLRP3Q96P20 1036 aa23.34■■□□□ 1.33
RUNX3-204ENST00000479341 LAMB2P55268 1798 aa23.33■■□□□ 1.33
RUNX3-204ENST00000479341 CTSWP56202 376 aa23.33■■□□□ 1.33
RUNX3-204ENST00000479341 AAMPQ13685 434 aa23.33■■□□□ 1.33
RUNX3-204ENST00000479341 BICC1Q9H694 974 aaKnown RBP23.33■■□□□ 1.33
RUNX3-204ENST00000479341 C1orf115Q9H7X2 142 aa23.33■■□□□ 1.33
RUNX3-204ENST00000479341 ANKRD31Q8N7Z5 1873 aa23.32■■□□□ 1.32
RUNX3-204ENST00000479341 NEFLP07196 543 aa23.32■■□□□ 1.32
RUNX3-204ENST00000479341 TTLL11Q8NHH1 800 aa23.32■■□□□ 1.32
RUNX3-204ENST00000479341 PDE6BP35913 854 aa23.31■■□□□ 1.32
RUNX3-204ENST00000479341 CRY2Q49AN0 593 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms