RNA–Protein interactions for RNA: ENST00000479219.5

USP30-206, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 1 (best)

Gene USP30, Length 2,906 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-206ENST00000479219 UBR2Q8IWV8 1755 aa10.17□□□□□ -0.78
USP30-206ENST00000479219 MAP4K4O95819 1239 aaPredicted RBP10.17□□□□□ -0.78
USP30-206ENST00000479219 RNF20Q5VTR2 975 aa10.17□□□□□ -0.78
USP30-206ENST00000479219 PSMA5P28066 241 aa10.17□□□□□ -0.78
USP30-206ENST00000479219 CSPP1Q1MSJ5 1256 aa10.17□□□□□ -0.78
USP30-206ENST00000479219 HS1BP3Q53T59 392 aa10.17□□□□□ -0.78
USP30-206ENST00000479219 CYP46A1Q9Y6A2 500 aa10.17□□□□□ -0.78
USP30-206ENST00000479219 CCDC171Q6TFL3 1326 aa10.16□□□□□ -0.78
USP30-206ENST00000479219 ANKRD13DQ6ZTN6 518 aa10.16□□□□□ -0.78
USP30-206ENST00000479219 TMEM87AQ8NBN3 555 aa10.16□□□□□ -0.78
USP30-206ENST00000479219 NFATC2IPQ8NCF5 419 aa10.16□□□□□ -0.78
USP30-206ENST00000479219 IL25Q9H293 177 aa10.16□□□□□ -0.78
USP30-206ENST00000479219 COPRSQ9NQ92 184 aa10.16□□□□□ -0.78
USP30-206ENST00000479219 IGKV5-2P06315 115 aa10.16□□□□□ -0.78
USP30-206ENST00000479219 AIMP1Q12904 312 aaKnown RBP10.16□□□□□ -0.78
USP30-206ENST00000479219 LRSAM1Q6UWE0 723 aa10.16□□□□□ -0.78
USP30-206ENST00000479219 GPT2Q8TD30 523 aa10.16□□□□□ -0.78
USP30-206ENST00000479219 XAGE3Q8WTP9 111 aa10.16□□□□□ -0.78
USP30-206ENST00000479219 KAZALD1Q96I82 304 aa10.16□□□□□ -0.78
USP30-206ENST00000479219 SPATA31A3Q5VYP0 1347 aa10.15□□□□□ -0.78
USP30-206ENST00000479219 PRAMEF22A3QJZ6 481 aa10.15□□□□□ -0.78
USP30-206ENST00000479219 ANKRD1Q15327 319 aa10.15□□□□□ -0.78
USP30-206ENST00000479219 ZSWIM6Q9HCJ5 1215 aa10.15□□□□□ -0.78
USP30-206ENST00000479219 HMG20BQ9P0W2 317 aa10.15□□□□□ -0.78
USP30-206ENST00000479219 SASH1O94885 1247 aa10.15□□□□□ -0.78
USP30-206ENST00000479219 CASTP20810 708 aaKnown RBP10.15□□□□□ -0.78
USP30-206ENST00000479219 AK2P54819 239 aa10.15□□□□□ -0.78
USP30-206ENST00000479219 COPS6Q7L5N1 327 aa10.15□□□□□ -0.78
USP30-206ENST00000479219 ZNF496Q96IT1 587 aaPredicted RBP10.15□□□□□ -0.78
USP30-206ENST00000479219 PA2G4Q9UQ80 394 aaKnown RBP10.15□□□□□ -0.78
USP30-206ENST00000479219 PAPPAQ13219 1627 aa10.15□□□□□ -0.78
USP30-206ENST00000479219 NUP188Q5SRE5 1749 aa10.15□□□□□ -0.79
USP30-206ENST00000479219 GLI3P10071 1580 aa10.15□□□□□ -0.79
USP30-206ENST00000479219 RABL6Q3YEC7 729 aaPredicted RBP10.14□□□□□ -0.79
USP30-206ENST00000479219 MYD88Q99836 296 aa10.14□□□□□ -0.79
USP30-206ENST00000479219 SMC3Q9UQE7 1217 aa10.14□□□□□ -0.79
USP30-206ENST00000479219 PCDH11XQ9BZA7 1347 aa10.14□□□□□ -0.79
USP30-206ENST00000479219 PCDH11YQ9BZA8 1340 aa10.14□□□□□ -0.79
USP30-206ENST00000479219 LETM1O95202 739 aaPredicted RBP10.14□□□□□ -0.79
USP30-206ENST00000479219 CABP4P57796 275 aa10.14□□□□□ -0.79
USP30-206ENST00000479219 SLC39A6Q13433 755 aa10.14□□□□□ -0.79
USP30-206ENST00000479219 NECTIN1Q15223 517 aa10.14□□□□□ -0.79
USP30-206ENST00000479219 RUFY3Q7L099 469 aa10.14□□□□□ -0.79
USP30-206ENST00000479219 PLBD2Q8NHP8 589 aa10.14□□□□□ -0.79
USP30-206ENST00000479219 MAP4K1Q92918 833 aa10.14□□□□□ -0.79
USP30-206ENST00000479219 EAF2Q96CJ1 260 aaPredicted RBP10.14□□□□□ -0.79
USP30-206ENST00000479219 ALDH8A1Q9H2A2 487 aaPredicted RBP10.14□□□□□ -0.79
USP30-206ENST00000479219 PDRG1Q9NUG6 133 aa10.14□□□□□ -0.79
USP30-206ENST00000479219 JCADQ9P266 1359 aa10.14□□□□□ -0.79
USP30-206ENST00000479219 ZSCAN22P10073 491 aaPredicted RBP10.13□□□□□ -0.79
USP30-206ENST00000479219 MYL6BP14649 208 aa10.13□□□□□ -0.79
USP30-206ENST00000479219 KCNJ4P48050 445 aa10.13□□□□□ -0.79
USP30-206ENST00000479219 TAF7LQ5H9L4 462 aa10.13□□□□□ -0.79
USP30-206ENST00000479219 NOL8Q76FK4 1167 aaKnown RBP10.13□□□□□ -0.79
USP30-206ENST00000479219 LRP10Q7Z4F1 713 aa10.13□□□□□ -0.79
USP30-206ENST00000479219 JAKMIP1Q96N16 626 aaKnown RBP10.13□□□□□ -0.79
USP30-206ENST00000479219 RPAP1Q9BWH6 1393 aaPredicted RBP10.13□□□□□ -0.79
USP30-206ENST00000479219 MED23Q9ULK4 1368 aa10.13□□□□□ -0.79
USP30-206ENST00000479219 SPEF2Q9C093 1822 aa10.13□□□□□ -0.79
USP30-206ENST00000479219 STX6O43752 255 aa10.13□□□□□ -0.79
USP30-206ENST00000479219 KRT32Q14532 448 aa10.13□□□□□ -0.79
USP30-206ENST00000479219 RASEFQ8IZ41 740 aa10.13□□□□□ -0.79
USP30-206ENST00000479219 FSD1Q9BTV5 496 aa10.13□□□□□ -0.79
USP30-206ENST00000479219 XIRP1Q702N8 1843 aaKnown RBP10.13□□□□□ -0.79
USP30-206ENST00000479219 TCHHQ07283 1943 aa10.13□□□□□ -0.79
USP30-206ENST00000479219 CYP27B1O15528 508 aa10.13□□□□□ -0.79
USP30-206ENST00000479219 ATP5JP18859 108 aa10.13□□□□□ -0.79
USP30-206ENST00000479219 PRPF40BQ6NWY9 871 aaKnown RBP10.13□□□□□ -0.79
USP30-206ENST00000479219 FAM184AQ8NB25 1140 aa10.13□□□□□ -0.79
USP30-206ENST00000479219 ERVV-2B6SEH9 535 aa10.12□□□□□ -0.79
USP30-206ENST00000479219 PDCP20941 246 aa10.12□□□□□ -0.79
USP30-206ENST00000479219 RBM10P98175 930 aaKnown RBP10.12□□□□□ -0.79
USP30-206ENST00000479219 TSGA10IPQ3SY00 556 aa10.12□□□□□ -0.79
USP30-206ENST00000479219 MTERF4Q7Z6M4 381 aaKnown RBP10.12□□□□□ -0.79
USP30-206ENST00000479219 RBM8AQ9Y5S9 174 aaKnown RBP10.12□□□□□ -0.79
USP30-206ENST00000479219 NMIQ13287 307 aaPredicted RBP10.12□□□□□ -0.79
USP30-206ENST00000479219 CREB3L3Q68CJ9 461 aa10.12□□□□□ -0.79
USP30-206ENST00000479219 TMEM63CQ9P1W3 806 aa10.12□□□□□ -0.79
USP30-206ENST00000479219 WDR17Q8IZU2 1322 aa10.12□□□□□ -0.79
USP30-206ENST00000479219 ABCA3Q99758 1704 aa10.11□□□□□ -0.79
USP30-206ENST00000479219 ZNF500O60304 480 aaPredicted RBP10.11□□□□□ -0.79
USP30-206ENST00000479219 PRIM1P49642 420 aaKnown RBP10.11□□□□□ -0.79
USP30-206ENST00000479219 PTH1RQ03431 593 aa10.11□□□□□ -0.79
USP30-206ENST00000479219 F13A1P00488 732 aa10.11□□□□□ -0.79
USP30-206ENST00000479219 UBE2HP62256 183 aa10.11□□□□□ -0.79
USP30-206ENST00000479219 CCDC8Q9H0W5 538 aaPredicted RBP10.11□□□□□ -0.79
USP30-206ENST00000479219 NOL7Q9UMY1 257 aaKnown RBP10.11□□□□□ -0.79
USP30-206ENST00000479219 SYT1P21579 422 aa10.1□□□□□ -0.79
USP30-206ENST00000479219 TNNI3KQ59H18 835 aa10.1□□□□□ -0.79
USP30-206ENST00000479219 BLOC1S2Q6QNY1 142 aa10.1□□□□□ -0.79
USP30-206ENST00000479219 PDLIM2Q96JY6 352 aa10.1□□□□□ -0.79
USP30-206ENST00000479219 SIL1Q9H173 461 aa10.1□□□□□ -0.79
USP30-206ENST00000479219 TSPY26PQ9H489 355 aa10.1□□□□□ -0.79
USP30-206ENST00000479219 GPR108Q9NPR9 543 aa10.1□□□□□ -0.79
USP30-206ENST00000479219 USP16Q9Y5T5 823 aa10.1□□□□□ -0.79
USP30-206ENST00000479219 FPGT-TNNI3KV9GXZ4 949 aa10.1□□□□□ -0.79
USP30-206ENST00000479219 TJP1Q07157 1748 aa10.1□□□□□ -0.79
USP30-206ENST00000479219 SYCE3A1L190 88 aa10.1□□□□□ -0.79
USP30-206ENST00000479219 RFX5P48382 616 aaPredicted RBP10.1□□□□□ -0.79
USP30-206ENST00000479219 FOXD4L5Q5VV16 416 aaPredicted RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms