RNA–Protein interactions for RNA: ENST00000479003.5

CHKB-208, Transcript of choline kinase beta, human

TSL 2

Gene CHKB, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHKB-208	ENST00000479003	PANK2	Q9BZ23	570 aa		33.44	■■■□□ 2.94
CHKB-208	ENST00000479003	IL1RAPL2	Q9NP60	686 aa		33.44	■■■□□ 2.94
CHKB-208	ENST00000479003	RHPN1	Q8TCX5	695 aa		33.43	■■■□□ 2.94
CHKB-208	ENST00000479003	IL17RA	Q96F46	866 aa		33.43	■■■□□ 2.94
CHKB-208	ENST00000479003	TEX13A	Q9BXU3	409 aa	Predicted RBP	33.43	■■■□□ 2.94
CHKB-208	ENST00000479003	ARFGEF2	Q9Y6D5	1785 aa		33.43	■■■□□ 2.94
CHKB-208	ENST00000479003	LINS1	Q8NG48	757 aa		33.43	■■■□□ 2.94
CHKB-208	ENST00000479003	SRGAP3	O43295	1099 aa		33.42	■■■□□ 2.94
CHKB-208	ENST00000479003	ALDH1L1	O75891	902 aa		33.42	■■■□□ 2.94
CHKB-208	ENST00000479003	TJP1	Q07157	1748 aa		33.42	■■■□□ 2.94
CHKB-208	ENST00000479003	EPB41L2	O43491	1005 aa	Known RBP	33.41	■■■□□ 2.94
CHKB-208	ENST00000479003	IGKV5-2	P06315	115 aa		33.41	■■■□□ 2.94
CHKB-208	ENST00000479003	MCM2	P49736	904 aa		33.41	■■■□□ 2.94
CHKB-208	ENST00000479003	ZGPAT	Q8N5A5	531 aa	Known RBP	33.41	■■■□□ 2.94
CHKB-208	ENST00000479003	NEK4	P51957	841 aa		33.41	■■■□□ 2.94
CHKB-208	ENST00000479003	TTLL7	Q6ZT98	887 aa		33.41	■■■□□ 2.94
CHKB-208	ENST00000479003	KIF1BP	Q96EK5	621 aa		33.41	■■■□□ 2.94
CHKB-208	ENST00000479003	METTL22	Q9BUU2	404 aa	Predicted RBP	33.41	■■■□□ 2.94
CHKB-208	ENST00000479003	KLHL40	Q2TBA0	621 aa		33.4	■■■□□ 2.94
CHKB-208	ENST00000479003	STARD3NL	O95772	234 aa		33.4	■■■□□ 2.94
CHKB-208	ENST00000479003	NUTM1	Q86Y26	1132 aa		33.4	■■■□□ 2.94
CHKB-208	ENST00000479003	ANO2	Q9NQ90	1003 aa		33.4	■■■□□ 2.94
CHKB-208	ENST00000479003	FAM182B	Q5T319	152 aa		33.39	■■■□□ 2.94
CHKB-208	ENST00000479003	MYD88	Q99836	296 aa		33.39	■■■□□ 2.94
CHKB-208	ENST00000479003	PKP1	Q13835	747 aa		33.38	■■■□□ 2.93
CHKB-208	ENST00000479003	PLBD2	Q8NHP8	589 aa		33.38	■■■□□ 2.93
CHKB-208	ENST00000479003	QTRT2	Q9H974	415 aa	Known RBP	33.38	■■■□□ 2.93
CHKB-208	ENST00000479003	PI4K2B	Q8TCG2	481 aa		33.38	■■■□□ 2.93
CHKB-208	ENST00000479003	PALD1	Q9ULE6	856 aa		33.38	■■■□□ 2.93
CHKB-208	ENST00000479003	CYP19A1	P11511	503 aa	Predicted RBP	33.37	■■■□□ 2.93
CHKB-208	ENST00000479003	NEXN	Q0ZGT2	675 aa		33.37	■■■□□ 2.93
CHKB-208	ENST00000479003	HSP90AB4P	Q58FF6	505 aa		33.37	■■■□□ 2.93
CHKB-208	ENST00000479003	GAS2L3	Q86XJ1	694 aa		33.37	■■■□□ 2.93
CHKB-208	ENST00000479003	NUP188	Q5SRE5	1749 aa		33.36	■■■□□ 2.93
CHKB-208	ENST00000479003	ONECUT3	O60422	494 aa	Predicted RBP	33.36	■■■□□ 2.93
CHKB-208	ENST00000479003	TMX3	Q96JJ7	454 aa		33.36	■■■□□ 2.93
CHKB-208	ENST00000479003	C9orf78	Q9NZ63	289 aa	Predicted RBP	33.36	■■■□□ 2.93
CHKB-208	ENST00000479003	NEURL1B	A8MQ27	555 aa		33.35	■■■□□ 2.93
CHKB-208	ENST00000479003	MTX1	Q13505	466 aa		33.35	■■■□□ 2.93
CHKB-208	ENST00000479003	PALLD	Q8WX93	1383 aa		33.35	■■■□□ 2.93
CHKB-208	ENST00000479003	ZNF330	Q9Y3S2	320 aa	Predicted RBP	33.35	■■■□□ 2.93
CHKB-208	ENST00000479003	PTF1A	Q7RTS3	328 aa		33.35	■■■□□ 2.93
CHKB-208	ENST00000479003	DDX49	Q9Y6V7	483 aa	Known RBP	33.35	■■■□□ 2.93
CHKB-208	ENST00000479003	MCTP1	Q6DN14	999 aa		33.34	■■■□□ 2.93
CHKB-208	ENST00000479003	SEPT12	Q8IYM1	358 aa		33.34	■■■□□ 2.93
CHKB-208	ENST00000479003	ZDHHC9	Q9Y397	364 aa		33.34	■■■□□ 2.93
CHKB-208	ENST00000479003	CUL4A	Q13619	759 aa		33.33	■■■□□ 2.93
CHKB-208	ENST00000479003	LOC102724428	A0A0B4J2F2	783 aa		33.32	■■■□□ 2.93
CHKB-208	ENST00000479003	GRM8	O00222	908 aa		33.32	■■■□□ 2.93
CHKB-208	ENST00000479003	SIK1	P57059	783 aa		33.32	■■■□□ 2.93
CHKB-208	ENST00000479003	ZBTB3	Q9H5J0	574 aa		33.32	■■■□□ 2.93
CHKB-208	ENST00000479003	USP42	Q9H9J4	1324 aa	Known RBP	33.32	■■■□□ 2.92
CHKB-208	ENST00000479003	LMBRD1	Q9NUN5	540 aa		33.32	■■■□□ 2.92
CHKB-208	ENST00000479003	ZBTB1	Q9Y2K1	713 aa		33.32	■■■□□ 2.92
CHKB-208	ENST00000479003	AFDN	P55196	1824 aa	Known RBP	33.31	■■■□□ 2.92
CHKB-208	ENST00000479003	ATP5J2-PTCD1	G3V325	749 aa		33.31	■■■□□ 2.92
CHKB-208	ENST00000479003	ATP6V1A	P38606	617 aa		33.31	■■■□□ 2.92
CHKB-208	ENST00000479003	GCKR	Q14397	625 aa		33.31	■■■□□ 2.92
CHKB-208	ENST00000479003	IL25	Q9H293	177 aa		33.3	■■■□□ 2.92
CHKB-208	ENST00000479003	UTY	O14607	1347 aa		33.3	■■■□□ 2.92
CHKB-208	ENST00000479003	HSPA4	P34932	840 aa		33.29	■■■□□ 2.92
CHKB-208	ENST00000479003	EP400	Q96L91	3159 aa		33.28	■■■□□ 2.92
CHKB-208	ENST00000479003	ITPK1	Q13572	414 aa		33.28	■■■□□ 2.92
CHKB-208	ENST00000479003	CNTROB	Q8N137	903 aa		33.28	■■■□□ 2.92
CHKB-208	ENST00000479003	INTS4	Q96HW7	963 aa	Known RBP	33.28	■■■□□ 2.92
CHKB-208	ENST00000479003	RRAGD	Q9NQL2	400 aa	Predicted RBP	33.28	■■■□□ 2.92
CHKB-208	ENST00000479003	NHS	Q6T4R5	1651 aa		33.27	■■■□□ 2.92
CHKB-208	ENST00000479003	SMARCC1	Q92922	1105 aa	Predicted RBP	33.27	■■■□□ 2.92
CHKB-208	ENST00000479003	HDAC5	Q9UQL6	1122 aa		33.27	■■■□□ 2.92
CHKB-208	ENST00000479003	TTC41P	Q6P2S7	1318 aa		33.27	■■■□□ 2.92
CHKB-208	ENST00000479003	CIC	Q96RK0	1608 aa	Predicted RBP	33.26	■■■□□ 2.92
CHKB-208	ENST00000479003	SGSM2	O43147	1006 aa		33.26	■■■□□ 2.92
CHKB-208	ENST00000479003	UBE2Q2	Q8WVN8	375 aa		33.26	■■■□□ 2.92
CHKB-208	ENST00000479003	MAP4K4	O95819	1239 aa	Predicted RBP	33.26	■■■□□ 2.91
CHKB-208	ENST00000479003	SUCLG2	Q96I99	432 aa		33.25	■■■□□ 2.91
CHKB-208	ENST00000479003	BTAF1	O14981	1849 aa		33.25	■■■□□ 2.91
CHKB-208	ENST00000479003	KAZALD1	Q96I82	304 aa		33.25	■■■□□ 2.91
CHKB-208	ENST00000479003	RAD50	Q92878	1312 aa		33.24	■■■□□ 2.91
CHKB-208	ENST00000479003	OS9	Q13438	667 aa	Predicted RBP	33.22	■■■□□ 2.91
CHKB-208	ENST00000479003	JARID2	Q92833	1246 aa	Predicted RBP	33.22	■■■□□ 2.91
CHKB-208	ENST00000479003	GLRX3	O76003	335 aa	Known RBP	33.22	■■■□□ 2.91
CHKB-208	ENST00000479003	CRKL	P46109	303 aa	Known RBP	33.22	■■■□□ 2.91
CHKB-208	ENST00000479003	INTS5	Q6P9B9	1019 aa	Known RBP	33.22	■■■□□ 2.91
CHKB-208	ENST00000479003	KIF6	Q6ZMV9	814 aa		33.22	■■■□□ 2.91
CHKB-208	ENST00000479003	SBF2	Q86WG5	1849 aa		33.21	■■■□□ 2.91
CHKB-208	ENST00000479003	ZNF445	P59923	1031 aa		33.21	■■■□□ 2.91
CHKB-208	ENST00000479003	BICC1	Q9H694	974 aa	Known RBP	33.2	■■■□□ 2.91
CHKB-208	ENST00000479003	MYH14	Q7Z406	1995 aa	Known RBP	33.2	■■■□□ 2.91
CHKB-208	ENST00000479003	BRD1	O95696	1058 aa		33.2	■■■□□ 2.9
CHKB-208	ENST00000479003	ERC1	Q8IUD2	1116 aa		33.2	■■■□□ 2.9
CHKB-208	ENST00000479003	CLASRP	Q8N2M8	674 aa	Known RBP	33.2	■■■□□ 2.9
CHKB-208	ENST00000479003	LSG1	Q9H089	658 aa	Known RBP	33.2	■■■□□ 2.9
CHKB-208	ENST00000479003	CCDC87	Q9NVE4	849 aa		33.2	■■■□□ 2.9
CHKB-208	ENST00000479003	IL6ST	P40189	918 aa	Predicted RBP	33.19	■■■□□ 2.9
CHKB-208	ENST00000479003	UPF3B	Q9BZI7	483 aa	Known RBP	33.19	■■■□□ 2.9
CHKB-208	ENST00000479003	COL5A3	P25940	1745 aa	Predicted RBP	33.19	■■■□□ 2.9
CHKB-208	ENST00000479003		A0A087WZG4	1122 aa		33.19	■■■□□ 2.9
CHKB-208	ENST00000479003	UBE3B	Q7Z3V4	1068 aa		33.19	■■■□□ 2.9
CHKB-208	ENST00000479003	MAP3K15	Q6ZN16	1313 aa		33.18	■■■□□ 2.9
CHKB-208	ENST00000479003	RREB1	Q92766	1687 aa		33.18	■■■□□ 2.9

Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms