RNA–Protein interactions for RNA: ENST00000478245.1

TCTN3-205, Transcript of tectonic family member 3, humanhuman

TSL 2

Gene TCTN3, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTN3-205ENST00000478245 NIM1KQ8IY84 436 aa12.74□□□□□ -0.37
TCTN3-205ENST00000478245 GLIS2Q9BZE0 524 aaPredicted RBP12.74□□□□□ -0.37
TCTN3-205ENST00000478245 POLR2AP24928 1970 aaKnown RBP12.72□□□□□ -0.37
TCTN3-205ENST00000478245 GRIPAP1Q4V328 841 aa12.72□□□□□ -0.37
TCTN3-205ENST00000478245 RPGRQ92834 1020 aaKnown RBP12.72□□□□□ -0.37
TCTN3-205ENST00000478245 GPRC5DQ9NZD1 345 aa12.72□□□□□ -0.37
TCTN3-205ENST00000478245 GNAT3A8MTJ3 354 aa12.71□□□□□ -0.37
TCTN3-205ENST00000478245 HUNKP57058 714 aa12.71□□□□□ -0.37
TCTN3-205ENST00000478245 TRIM26Q12899 539 aaPredicted RBP12.71□□□□□ -0.37
TCTN3-205ENST00000478245 IL17REQ8NFR9 667 aa12.71□□□□□ -0.37
TCTN3-205ENST00000478245 ZIC5Q96T25 663 aa12.71□□□□□ -0.37
TCTN3-205ENST00000478245 KNSTRNQ9Y448 316 aa12.71□□□□□ -0.37
TCTN3-205ENST00000478245 USP16Q9Y5T5 823 aa12.71□□□□□ -0.37
TCTN3-205ENST00000478245 SNED1Q8TER0 1413 aa12.71□□□□□ -0.38
TCTN3-205ENST00000478245 BTBD11A6QL63 1104 aa12.7□□□□□ -0.38
TCTN3-205ENST00000478245 TCERG1O14776 1098 aaKnown RBP12.7□□□□□ -0.38
TCTN3-205ENST00000478245 PPIP5K2O43314 1243 aa12.7□□□□□ -0.38
TCTN3-205ENST00000478245 TMX4Q9H1E5 349 aaPredicted RBP12.7□□□□□ -0.38
TCTN3-205ENST00000478245 NUP98P52948 1817 aa12.69□□□□□ -0.38
TCTN3-205ENST00000478245 DIAPH1O60610 1272 aaKnown RBP12.69□□□□□ -0.38
TCTN3-205ENST00000478245 CDC37L1Q7L3B6 337 aa12.69□□□□□ -0.38
TCTN3-205ENST00000478245 GAS2L2Q8NHY3 880 aa12.69□□□□□ -0.38
TCTN3-205ENST00000478245 NYXQ9GZU5 481 aa12.69□□□□□ -0.38
TCTN3-205ENST00000478245 SAGE1Q9NXZ1 904 aa12.69□□□□□ -0.38
TCTN3-205ENST00000478245 NPC1L1Q9UHC9 1359 aa12.69□□□□□ -0.38
TCTN3-205ENST00000478245 RGL2O15211 777 aa12.68□□□□□ -0.38
TCTN3-205ENST00000478245 KCNQ3O43525 872 aa12.68□□□□□ -0.38
TCTN3-205ENST00000478245 TRPA1O75762 1119 aa12.68□□□□□ -0.38
TCTN3-205ENST00000478245 GMPSP49915 693 aaPredicted RBP12.68□□□□□ -0.38
TCTN3-205ENST00000478245 AOC3Q16853 763 aa12.68□□□□□ -0.38
TCTN3-205ENST00000478245 CRY2Q49AN0 593 aa12.68□□□□□ -0.38
TCTN3-205ENST00000478245 NBPF15Q8N660 670 aa12.68□□□□□ -0.38
TCTN3-205ENST00000478245 ZC3H15Q8WU90 426 aaKnown RBP12.68□□□□□ -0.38
TCTN3-205ENST00000478245 GCC1Q96CN9 775 aa12.68□□□□□ -0.38
TCTN3-205ENST00000478245 BCL2L13Q9BXK5 485 aa12.68□□□□□ -0.38
TCTN3-205ENST00000478245 PGAP2Q9UHJ9 254 aa12.68□□□□□ -0.38
TCTN3-205ENST00000478245 PPEF1O14829 653 aaPredicted RBP12.67□□□□□ -0.38
TCTN3-205ENST00000478245 CXCL9Q07325 125 aa12.67□□□□□ -0.38
TCTN3-205ENST00000478245 CTU1Q7Z7A3 348 aaKnown RBP12.67□□□□□ -0.38
TCTN3-205ENST00000478245 NUTM1Q86Y26 1132 aa12.67□□□□□ -0.38
TCTN3-205ENST00000478245 RBM17Q96I25 401 aaKnown RBP12.67□□□□□ -0.38
TCTN3-205ENST00000478245 ZNRF3Q9ULT6 936 aa12.67□□□□□ -0.38
TCTN3-205ENST00000478245 PRAMEF22A3QJZ6 481 aa12.66□□□□□ -0.38
TCTN3-205ENST00000478245 SNRPA1P09661 255 aaKnown RBP12.66□□□□□ -0.38
TCTN3-205ENST00000478245 HOXA10P31260 410 aaPredicted RBP12.66□□□□□ -0.38
TCTN3-205ENST00000478245 KIF23Q02241 960 aaPredicted RBP12.66□□□□□ -0.38
TCTN3-205ENST00000478245 HLFQ16534 295 aa12.66□□□□□ -0.38
TCTN3-205ENST00000478245 RGMBQ6NW40 437 aa12.66□□□□□ -0.38
TCTN3-205ENST00000478245 USP48Q86UV5 1035 aa12.66□□□□□ -0.38
TCTN3-205ENST00000478245 CCDC102AQ96A19 550 aa12.66□□□□□ -0.38
TCTN3-205ENST00000478245 RNF186Q9NXI6 227 aa12.66□□□□□ -0.38
TCTN3-205ENST00000478245 ABCC12Q96J65 1359 aa12.66□□□□□ -0.38
TCTN3-205ENST00000478245 ZNF157P51786 506 aaPredicted RBP12.65□□□□□ -0.38
TCTN3-205ENST00000478245 C2orf69Q8N8R5 385 aa12.65□□□□□ -0.38
TCTN3-205ENST00000478245 CRAMP1Q96RY5 1269 aa12.65□□□□□ -0.38
TCTN3-205ENST00000478245 VPS33BQ9H267 617 aa12.65□□□□□ -0.38
TCTN3-205ENST00000478245 CDHR2Q9BYE9 1310 aa12.64□□□□□ -0.39
TCTN3-205ENST00000478245 NBPF26B4DH59 902 aa12.64□□□□□ -0.39
TCTN3-205ENST00000478245 H7C1D1 291 aa12.64□□□□□ -0.39
TCTN3-205ENST00000478245 U2SURPO15042 1029 aaKnown RBP12.64□□□□□ -0.39
TCTN3-205ENST00000478245 HIRAP54198 1017 aaPredicted RBP12.64□□□□□ -0.39
TCTN3-205ENST00000478245 TNIP1Q15025 636 aa12.64□□□□□ -0.39
TCTN3-205ENST00000478245 NBPF10Q6P3W6 841 aaKnown RBP12.64□□□□□ -0.39
TCTN3-205ENST00000478245 SUPT20HQ8NEM7 779 aa12.64□□□□□ -0.39
TCTN3-205ENST00000478245 TRPM4Q8TD43 1214 aa12.64□□□□□ -0.39
TCTN3-205ENST00000478245 KIF7Q2M1P5 1343 aa12.63□□□□□ -0.39
TCTN3-205ENST00000478245 FAM155AB1AL88 458 aaPredicted RBP12.63□□□□□ -0.39
TCTN3-205ENST00000478245 RAD17O75943 681 aa12.63□□□□□ -0.39
TCTN3-205ENST00000478245 SLC51AQ86UW1 340 aa12.63□□□□□ -0.39
TCTN3-205ENST00000478245 NGEFQ8N5V2 710 aa12.63□□□□□ -0.39
TCTN3-205ENST00000478245 GBA2Q9HCG7 927 aaPredicted RBP12.63□□□□□ -0.39
TCTN3-205ENST00000478245 CNOT7Q9UIV1 285 aaKnown RBP12.63□□□□□ -0.39
TCTN3-205ENST00000478245 HPS5Q9UPZ3 1129 aa12.63□□□□□ -0.39
TCTN3-205ENST00000478245 CEMIPQ8WUJ3 1361 aa12.63□□□□□ -0.39
TCTN3-205ENST00000478245 DLK2Q6UY11 383 aa12.62□□□□□ -0.39
TCTN3-205ENST00000478245 KRT26Q7Z3Y9 468 aa12.62□□□□□ -0.39
TCTN3-205ENST00000478245 HDAC9Q9UKV0 1011 aa12.62□□□□□ -0.39
TCTN3-205ENST00000478245 RIC1Q4ADV7 1423 aa12.62□□□□□ -0.39
TCTN3-205ENST00000478245 GPTP24298 496 aa12.61□□□□□ -0.39
TCTN3-205ENST00000478245 PKN2Q16513 984 aaKnown RBP12.61□□□□□ -0.39
TCTN3-205ENST00000478245 DPP8Q6V1X1 898 aaPredicted RBP12.61□□□□□ -0.39
TCTN3-205ENST00000478245 MICALL2Q8IY33 904 aa12.61□□□□□ -0.39
TCTN3-205ENST00000478245 CSRNP1Q96S65 589 aa12.61□□□□□ -0.39
TCTN3-205ENST00000478245 ATP6V0A2Q9Y487 856 aa12.61□□□□□ -0.39
TCTN3-205ENST00000478245 SHTN1A0MZ66 631 aa12.6□□□□□ -0.39
TCTN3-205ENST00000478245 EIF4G2P78344 907 aaKnown RBP eCLIP12.6□□□□□ -0.39
TCTN3-205ENST00000478245 AMER1Q5JTC6 1135 aaPredicted RBP12.6□□□□□ -0.39
TCTN3-205ENST00000478245 HABP4Q5JVS0 413 aaKnown RBP12.6□□□□□ -0.39
TCTN3-205ENST00000478245 KIF6Q6ZMV9 814 aa12.6□□□□□ -0.39
TCTN3-205ENST00000478245 RTF1Q92541 710 aaKnown RBP12.6□□□□□ -0.39
TCTN3-205ENST00000478245 DCPSQ96C86 337 aaKnown RBP12.6□□□□□ -0.39
TCTN3-205ENST00000478245 LAMB4A4D0S4 1761 aa12.59□□□□□ -0.39
TCTN3-205ENST00000478245 ERVV-1B6SEH8 477 aa12.59□□□□□ -0.39
TCTN3-205ENST00000478245 HSPA5P11021 654 aaKnown RBP12.59□□□□□ -0.39
TCTN3-205ENST00000478245 REM2Q8IYK8 340 aaPredicted RBP12.59□□□□□ -0.39
TCTN3-205ENST00000478245 MPNDQ8N594 471 aa12.59□□□□□ -0.39
TCTN3-205ENST00000478245 NLRP3Q96P20 1036 aa12.59□□□□□ -0.39
TCTN3-205ENST00000478245 RTFDC1Q9BY42 306 aaPredicted RBP12.59□□□□□ -0.39
TCTN3-205ENST00000478245 MAP3K15Q6ZN16 1313 aa12.59□□□□□ -0.39
TCTN3-205ENST00000478245 IBTKQ9P2D0 1353 aaPredicted RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms