RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 HUNKP57058 714 aa10.04□□□□□ -0.8
SPTLC1-205ENST00000477888 MAPK8IP2Q13387 824 aaPredicted RBP10.04□□□□□ -0.8
SPTLC1-205ENST00000477888 MTHFSDQ2M296 383 aaKnown RBP10.04□□□□□ -0.8
SPTLC1-205ENST00000477888 ZNF790Q6PG37 636 aa10.04□□□□□ -0.8
SPTLC1-205ENST00000477888 CDC37L1Q7L3B6 337 aa10.04□□□□□ -0.8
SPTLC1-205ENST00000477888 DZIP3Q86Y13 1208 aaKnown RBP10.04□□□□□ -0.8
SPTLC1-205ENST00000477888 LARGE2Q8N3Y3 721 aa10.04□□□□□ -0.8
SPTLC1-205ENST00000477888 ZNF408Q9H9D4 720 aa10.04□□□□□ -0.8
SPTLC1-205ENST00000477888 HPS5Q9UPZ3 1129 aa10.04□□□□□ -0.8
SPTLC1-205ENST00000477888 KIF23Q02241 960 aaPredicted RBP10.03□□□□□ -0.8
SPTLC1-205ENST00000477888 CRY2Q49AN0 593 aa10.03□□□□□ -0.8
SPTLC1-205ENST00000477888 GRIPAP1Q4V328 841 aa10.03□□□□□ -0.8
SPTLC1-205ENST00000477888 RGMBQ6NW40 437 aa10.03□□□□□ -0.8
SPTLC1-205ENST00000477888 NPM2Q86SE8 214 aaKnown RBP10.03□□□□□ -0.8
SPTLC1-205ENST00000477888 FXR1P51114 621 aaKnown RBP eCLIP10.02□□□□□ -0.81
SPTLC1-205ENST00000477888 CXCL9Q07325 125 aa10.02□□□□□ -0.81
SPTLC1-205ENST00000477888 DLK2Q6UY11 383 aa10.02□□□□□ -0.81
SPTLC1-205ENST00000477888 RGL2O15211 777 aa10.01□□□□□ -0.81
SPTLC1-205ENST00000477888 HOXA10P31260 410 aaPredicted RBP10.01□□□□□ -0.81
SPTLC1-205ENST00000477888 GMPSP49915 693 aaPredicted RBP10.01□□□□□ -0.81
SPTLC1-205ENST00000477888 PKN2Q16513 984 aaKnown RBP10.01□□□□□ -0.81
SPTLC1-205ENST00000477888 NIM1KQ8IY84 436 aa10.01□□□□□ -0.81
SPTLC1-205ENST00000477888 CCDC102AQ96A19 550 aa10.01□□□□□ -0.81
SPTLC1-205ENST00000477888 CSRNP1Q96S65 589 aa10.01□□□□□ -0.81
SPTLC1-205ENST00000477888 NIP7Q9Y221 180 aaKnown RBP eCLIP10.01□□□□□ -0.81
SPTLC1-205ENST00000477888 MKI67P46013 3256 aaKnown RBP10.01□□□□□ -0.81
SPTLC1-205ENST00000477888 SCN11AQ9UI33 1791 aa10.01□□□□□ -0.81
SPTLC1-205ENST00000477888 ARFGEF2Q9Y6D5 1785 aa10.01□□□□□ -0.81
SPTLC1-205ENST00000477888 USP48Q86UV5 1035 aa10□□□□□ -0.81
SPTLC1-205ENST00000477888 SLC51AQ86UW1 340 aa10□□□□□ -0.81
SPTLC1-205ENST00000477888 IL17REQ8NFR9 667 aa10□□□□□ -0.81
SPTLC1-205ENST00000477888 FMNL2Q96PY5 1086 aa10□□□□□ -0.81
SPTLC1-205ENST00000477888 VPS33BQ9H267 617 aa10□□□□□ -0.81
SPTLC1-205ENST00000477888 ZNRF3Q9ULT6 936 aa10□□□□□ -0.81
SPTLC1-205ENST00000477888 ZNF652Q9Y2D9 606 aa10□□□□□ -0.81
SPTLC1-205ENST00000477888 USP16Q9Y5T5 823 aa10□□□□□ -0.81
SPTLC1-205ENST00000477888 CACNA1SQ13698 1873 aa10□□□□□ -0.81
SPTLC1-205ENST00000477888 NPC1L1Q9UHC9 1359 aa10□□□□□ -0.81
SPTLC1-205ENST00000477888 SCN7AQ01118 1682 aa9.99□□□□□ -0.81
SPTLC1-205ENST00000477888 FAM177BA6PVY3 158 aa9.99□□□□□ -0.81
SPTLC1-205ENST00000477888 HMOX1P09601 288 aa9.99□□□□□ -0.81
SPTLC1-205ENST00000477888 PIP4K2AP48426 406 aaPredicted RBP9.99□□□□□ -0.81
SPTLC1-205ENST00000477888 TRPM4Q8TD43 1214 aa9.99□□□□□ -0.81
SPTLC1-205ENST00000477888 PPIP5K2O43314 1243 aa9.98□□□□□ -0.81
SPTLC1-205ENST00000477888 KCNQ3O43525 872 aa9.98□□□□□ -0.81
SPTLC1-205ENST00000477888 ATXN8OSP0DMR3 200 aa9.98□□□□□ -0.81
SPTLC1-205ENST00000477888 ZNF157P51786 506 aaPredicted RBP9.98□□□□□ -0.81
SPTLC1-205ENST00000477888 AOC3Q16853 763 aa9.98□□□□□ -0.81
SPTLC1-205ENST00000477888 GBA2Q9HCG7 927 aaPredicted RBP9.98□□□□□ -0.81
SPTLC1-205ENST00000477888 KIF7Q2M1P5 1343 aa9.98□□□□□ -0.81
SPTLC1-205ENST00000477888 CDHR2Q9BYE9 1310 aa9.98□□□□□ -0.81
SPTLC1-205ENST00000477888 SHTN1A0MZ66 631 aa9.97□□□□□ -0.81
SPTLC1-205ENST00000477888 PRAMEF22A3QJZ6 481 aa9.97□□□□□ -0.81
SPTLC1-205ENST00000477888 SLC10A3P09131 477 aa9.97□□□□□ -0.81
SPTLC1-205ENST00000477888 GTF2E1P29083 439 aaPredicted RBP9.97□□□□□ -0.81
SPTLC1-205ENST00000477888 TEFQ10587 303 aa9.97□□□□□ -0.81
SPTLC1-205ENST00000477888 HLFQ16534 295 aa9.97□□□□□ -0.81
SPTLC1-205ENST00000477888 MORC1Q86VD1 984 aa9.97□□□□□ -0.81
SPTLC1-205ENST00000477888 REM2Q8IYK8 340 aaPredicted RBP9.97□□□□□ -0.81
SPTLC1-205ENST00000477888 C2orf69Q8N8R5 385 aa9.97□□□□□ -0.81
SPTLC1-205ENST00000477888 CRAMP1Q96RY5 1269 aa9.97□□□□□ -0.81
SPTLC1-205ENST00000477888 PANK3Q9H999 370 aa9.97□□□□□ -0.81
SPTLC1-205ENST00000477888 CNOT7Q9UIV1 285 aaKnown RBP9.97□□□□□ -0.81
SPTLC1-205ENST00000477888 TRPM7Q96QT4 1865 aa9.97□□□□□ -0.81
SPTLC1-205ENST00000477888 BCORQ6W2J9 1755 aa9.96□□□□□ -0.81
SPTLC1-205ENST00000477888 NBPF26B4DH59 902 aa9.96□□□□□ -0.82
SPTLC1-205ENST00000477888 NBPF10Q6P3W6 841 aaKnown RBP9.96□□□□□ -0.82
SPTLC1-205ENST00000477888 NUTM1Q86Y26 1132 aa9.96□□□□□ -0.82
SPTLC1-205ENST00000477888 ZNF296Q8WUU4 475 aaPredicted RBP9.96□□□□□ -0.82
SPTLC1-205ENST00000477888 RPGRQ92834 1020 aaKnown RBP9.96□□□□□ -0.82
SPTLC1-205ENST00000477888 BCL2L13Q9BXK5 485 aa9.96□□□□□ -0.82
SPTLC1-205ENST00000477888 RTFDC1Q9BY42 306 aaPredicted RBP9.96□□□□□ -0.82
SPTLC1-205ENST00000477888 ABCC12Q96J65 1359 aa9.96□□□□□ -0.82
SPTLC1-205ENST00000477888 UBR2Q8IWV8 1755 aa9.96□□□□□ -0.82
SPTLC1-205ENST00000477888 H7C1D1 291 aa9.95□□□□□ -0.82
SPTLC1-205ENST00000477888 TCERG1O14776 1098 aaKnown RBP9.95□□□□□ -0.82
SPTLC1-205ENST00000477888 PPEF1O14829 653 aaPredicted RBP9.95□□□□□ -0.82
SPTLC1-205ENST00000477888 RAD17O75943 681 aa9.95□□□□□ -0.82
SPTLC1-205ENST00000477888 TNIP1Q15025 636 aa9.95□□□□□ -0.82
SPTLC1-205ENST00000477888 FBXO46Q6PJ61 603 aaPredicted RBP9.95□□□□□ -0.82
SPTLC1-205ENST00000477888 KRT26Q7Z3Y9 468 aa9.95□□□□□ -0.82
SPTLC1-205ENST00000477888 GNAT3A8MTJ3 354 aa9.94□□□□□ -0.82
SPTLC1-205ENST00000477888 DLL1O00548 723 aa9.94□□□□□ -0.82
SPTLC1-205ENST00000477888 SNRPA1P09661 255 aaKnown RBP9.94□□□□□ -0.82
SPTLC1-205ENST00000477888 KIAA2012Q0VF49 1180 aa9.94□□□□□ -0.82
SPTLC1-205ENST00000477888 SAMD7Q7Z3H4 446 aa9.94□□□□□ -0.82
SPTLC1-205ENST00000477888 MICALL2Q8IY33 904 aa9.94□□□□□ -0.82
SPTLC1-205ENST00000477888 RBM17Q96I25 401 aaKnown RBP9.94□□□□□ -0.82
SPTLC1-205ENST00000477888 NYXQ9GZU5 481 aa9.94□□□□□ -0.82
SPTLC1-205ENST00000477888 HDAC9Q9UKV0 1011 aa9.94□□□□□ -0.82
SPTLC1-205ENST00000477888 ATP6V0A2Q9Y487 856 aa9.94□□□□□ -0.82
SPTLC1-205ENST00000477888 RIC1Q4ADV7 1423 aa9.93□□□□□ -0.82
SPTLC1-205ENST00000477888 CEMIPQ8WUJ3 1361 aa9.93□□□□□ -0.82
SPTLC1-205ENST00000477888 A0A0C4DFX4 3053 aa9.93□□□□□ -0.82
SPTLC1-205ENST00000477888 BTBD11A6QL63 1104 aa9.93□□□□□ -0.82
SPTLC1-205ENST00000477888 YDJCA8MPS7 323 aa9.93□□□□□ -0.82
SPTLC1-205ENST00000477888 TBC1D8O95759 1140 aa9.93□□□□□ -0.82
SPTLC1-205ENST00000477888 EGFRP00533 1210 aa9.93□□□□□ -0.82
SPTLC1-205ENST00000477888 NOM1Q5C9Z4 860 aaKnown RBP9.93□□□□□ -0.82
SPTLC1-205ENST00000477888 C3orf67Q6ZVT6 689 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms