RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 CNTNAP4Q9C0A0 1308 aa15.1■□□□□ 0.01
PRPF39-203ENST00000477626 CSF1RP07333 972 aa15.1■□□□□ 0.01
PRPF39-203ENST00000477626 CCDC191Q8NCU4 936 aa15.1■□□□□ 0.01
PRPF39-203ENST00000477626 TCIRG1Q13488 830 aa15.09■□□□□ 0.01
PRPF39-203ENST00000477626 HLFQ16534 295 aa15.09■□□□□ 0.01
PRPF39-203ENST00000477626 ANKRD31Q8N7Z5 1873 aa15.09■□□□□ 0.01
PRPF39-203ENST00000477626 HMMRO75330 724 aa15.09■□□□□ 0.01
PRPF39-203ENST00000477626 AMIGO3Q86WK7 504 aa15.09■□□□□ 0.01
PRPF39-203ENST00000477626 LINC00116Q8NCU8 138 aa15.09■□□□□ 0.01
PRPF39-203ENST00000477626 CAMTA2O94983 1202 aa15.08■□□□□ 0.01
PRPF39-203ENST00000477626 GIGYF2Q6Y7W6 1299 aaKnown RBP15.08■□□□□ 0.01
PRPF39-203ENST00000477626 TBC1D9Q6ZT07 1266 aa15.08■□□□□ 0.01
PRPF39-203ENST00000477626 NGLY1Q96IV0 654 aa15.08■□□□□ 0.01
PRPF39-203ENST00000477626 LRRCC1Q9C099 1032 aa15.08■□□□□ 0.01
PRPF39-203ENST00000477626 ZNF609O15014 1411 aa15.08■□□□□ 0
PRPF39-203ENST00000477626 AIMP1Q12904 312 aaKnown RBP15.08■□□□□ 0
PRPF39-203ENST00000477626 ATG9AQ7Z3C6 839 aa15.08■□□□□ 0
PRPF39-203ENST00000477626 LAMA4Q16363 1823 aa15.08■□□□□ 0
PRPF39-203ENST00000477626 LOC102724428A0A0B4J2F2 783 aa15.08■□□□□ 0
PRPF39-203ENST00000477626 SIK1P57059 783 aa15.08■□□□□ 0
PRPF39-203ENST00000477626 RHPN1Q8TCX5 695 aa15.08■□□□□ 0
PRPF39-203ENST00000477626 SNRKQ9NRH2 765 aa15.07■□□□□ 0
PRPF39-203ENST00000477626 SRGAP3O43295 1099 aa15.07■□□□□ 0
PRPF39-203ENST00000477626 RIC3Q7Z5B4 369 aa15.07■□□□□ 0
PRPF39-203ENST00000477626 SDSP20132 328 aa15.06■□□□□ 0
PRPF39-203ENST00000477626 IPO9Q96P70 1041 aaKnown RBP15.06■□□□□ 0
PRPF39-203ENST00000477626 FBXO41Q8TF61 875 aa15.06■□□□□ 0
PRPF39-203ENST00000477626 RTL9Q8NET4 1388 aa15.06■□□□□ 0
PRPF39-203ENST00000477626 CRKLP46109 303 aaKnown RBP15.05■□□□□ 0
PRPF39-203ENST00000477626 NLRP10Q86W26 655 aa15.05■□□□□ 0
PRPF39-203ENST00000477626 PCCAP05165 728 aaPredicted RBP15.05■□□□□ -0
PRPF39-203ENST00000477626 IL25Q9H293 177 aa15.05■□□□□ -0
PRPF39-203ENST00000477626 BCL2L12Q9HB09 334 aa15.04■□□□□ -0
PRPF39-203ENST00000477626 PA2G4Q9UQ80 394 aaKnown RBP15.04■□□□□ -0
PRPF39-203ENST00000477626 ATP5J2-PTCD1G3V325 749 aa15.04■□□□□ -0
PRPF39-203ENST00000477626 STARD3NLO95772 234 aa15.04■□□□□ -0
PRPF39-203ENST00000477626 RC3H1Q5TC82 1133 aaKnown RBP15.04■□□□□ -0
PRPF39-203ENST00000477626 MX1P20591 662 aa15.03■□□□□ -0
PRPF39-203ENST00000477626 ZBTB38Q8NAP3 1195 aaPredicted RBP15.03■□□□□ -0
PRPF39-203ENST00000477626 KIF1BPQ96EK5 621 aa15.03■□□□□ -0
PRPF39-203ENST00000477626 CWC25Q9NXE8 425 aaPredicted RBP15.03■□□□□ -0
PRPF39-203ENST00000477626 MEX3CQ5U5Q3 659 aaKnown RBP15.03■□□□□ -0
PRPF39-203ENST00000477626 ACSBG1Q96GR2 724 aa15.03■□□□□ -0
PRPF39-203ENST00000477626 VGLL2Q8N8G2 317 aa15.03■□□□□ -0
PRPF39-203ENST00000477626 CCDC87Q9NVE4 849 aa15.03■□□□□ -0
PRPF39-203ENST00000477626 TTC41PQ6P2S7 1318 aa15.02■□□□□ -0
PRPF39-203ENST00000477626 COL11A2P13942 1736 aaPredicted RBP15.02□□□□□ -0.01
PRPF39-203ENST00000477626 UBE3BQ7Z3V4 1068 aa15.01□□□□□ -0.01
PRPF39-203ENST00000477626 EAF2Q96CJ1 260 aaPredicted RBP15.01□□□□□ -0.01
PRPF39-203ENST00000477626 CIAO1O76071 339 aa15.01□□□□□ -0.01
PRPF39-203ENST00000477626 DDIT3P35638 169 aa15.01□□□□□ -0.01
PRPF39-203ENST00000477626 C9orf78Q9NZ63 289 aaPredicted RBP15.01□□□□□ -0.01
PRPF39-203ENST00000477626 TRPC5Q9UL62 973 aaPredicted RBP15.01□□□□□ -0.01
PRPF39-203ENST00000477626 KAT6BQ8WYB5 2073 aa15.01□□□□□ -0.01
PRPF39-203ENST00000477626 A0A087WZG4 1122 aa15.01□□□□□ -0.01
PRPF39-203ENST00000477626 ZBTB3Q9H5J0 574 aa15.01□□□□□ -0.01
PRPF39-203ENST00000477626 RGS17Q9UGC6 210 aaPredicted RBP15.01□□□□□ -0.01
PRPF39-203ENST00000477626 NEXNQ0ZGT2 675 aa15□□□□□ -0.01
PRPF39-203ENST00000477626 KLHDC4Q8TBB5 520 aa15□□□□□ -0.01
PRPF39-203ENST00000477626 TLR7Q9NYK1 1049 aaKnown RBP15□□□□□ -0.01
PRPF39-203ENST00000477626 DLEC1Q9Y238 1755 aa15□□□□□ -0.01
PRPF39-203ENST00000477626 SMARCC1Q92922 1105 aaPredicted RBP15□□□□□ -0.01
PRPF39-203ENST00000477626 NTSR2O95665 410 aa15□□□□□ -0.01
PRPF39-203ENST00000477626 TSHZ3Q63HK5 1081 aa15□□□□□ -0.01
PRPF39-203ENST00000477626 SYNE4Q8N205 404 aa14.99□□□□□ -0.01
PRPF39-203ENST00000477626 JARID2Q92833 1246 aaPredicted RBP14.99□□□□□ -0.01
PRPF39-203ENST00000477626 GPR108Q9NPR9 543 aa14.99□□□□□ -0.01
PRPF39-203ENST00000477626 MAST2Q6P0Q8 1798 aa14.99□□□□□ -0.01
PRPF39-203ENST00000477626 RFX7Q2KHR2 1363 aa14.99□□□□□ -0.01
PRPF39-203ENST00000477626 SURF6O75683 361 aaKnown RBP14.99□□□□□ -0.01
PRPF39-203ENST00000477626 AK7Q96M32 723 aa14.99□□□□□ -0.01
PRPF39-203ENST00000477626 USP26Q9BXU7 913 aa14.99□□□□□ -0.01
PRPF39-203ENST00000477626 LRRC4BQ9NT99 713 aa14.99□□□□□ -0.01
PRPF39-203ENST00000477626 CCDC9Q9Y3X0 531 aaKnown RBP14.99□□□□□ -0.01
PRPF39-203ENST00000477626 MYH13Q9UKX3 1938 aa14.98□□□□□ -0.01
PRPF39-203ENST00000477626 CDC45O75419 566 aa14.98□□□□□ -0.01
PRPF39-203ENST00000477626 HDAC5Q9UQL6 1122 aa14.98□□□□□ -0.01
PRPF39-203ENST00000477626 ATP6V1AP38606 617 aa14.97□□□□□ -0.01
PRPF39-203ENST00000477626 SEPT12Q8IYM1 358 aa14.97□□□□□ -0.01
PRPF39-203ENST00000477626 RBM42Q9BTD8 480 aaKnown RBP14.97□□□□□ -0.01
PRPF39-203ENST00000477626 BCL11BQ9C0K0 894 aaPredicted RBP14.97□□□□□ -0.01
PRPF39-203ENST00000477626 HSP90AB4PQ58FF6 505 aa14.97□□□□□ -0.01
PRPF39-203ENST00000477626 ANTXR1Q9H6X2 564 aa14.97□□□□□ -0.01
PRPF39-203ENST00000477626 FBXO3Q9UK99 471 aa14.97□□□□□ -0.01
PRPF39-203ENST00000477626 KIF13BQ9NQT8 1826 aa14.97□□□□□ -0.01
PRPF39-203ENST00000477626 CHMLP26374 656 aa14.97□□□□□ -0.01
PRPF39-203ENST00000477626 TTLL11Q8NHH1 800 aa14.97□□□□□ -0.01
PRPF39-203ENST00000477626 IL1RAPL2Q9NP60 686 aa14.97□□□□□ -0.01
PRPF39-203ENST00000477626 ABCC12Q96J65 1359 aa14.97□□□□□ -0.01
PRPF39-203ENST00000477626 KCNB2Q92953 911 aa14.96□□□□□ -0.01
PRPF39-203ENST00000477626 DBNLQ9UJU6 430 aaKnown RBP14.96□□□□□ -0.01
PRPF39-203ENST00000477626 CACNA1SQ13698 1873 aa14.96□□□□□ -0.01
PRPF39-203ENST00000477626 ERC1Q8IUD2 1116 aa14.96□□□□□ -0.01
PRPF39-203ENST00000477626 RIPOR2Q9Y4F9 1068 aa14.96□□□□□ -0.01
PRPF39-203ENST00000477626 EPB41L2O43491 1005 aaKnown RBP14.96□□□□□ -0.02
PRPF39-203ENST00000477626 PROM2Q8N271 834 aa14.96□□□□□ -0.02
PRPF39-203ENST00000477626 MED23Q9ULK4 1368 aa14.96□□□□□ -0.02
PRPF39-203ENST00000477626 ZBTB22O15209 634 aa14.95□□□□□ -0.02
PRPF39-203ENST00000477626 SUSD4Q5VX71 490 aa14.95□□□□□ -0.02
PRPF39-203ENST00000477626 LMBR1LQ6UX01 489 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms