RNA–Protein interactions for RNA: ENST00000476932.5

LIMS2-214, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-214ENST00000476932 LAMB4A4D0S4 1761 aa25.32■■□□□ 1.64
LIMS2-214ENST00000476932 GCKRQ14397 625 aa25.32■■□□□ 1.64
LIMS2-214ENST00000476932 SYT1P21579 422 aa25.31■■□□□ 1.64
LIMS2-214ENST00000476932 NMIQ13287 307 aaPredicted RBP25.31■■□□□ 1.64
LIMS2-214ENST00000476932 KLHDC4Q8TBB5 520 aa25.31■■□□□ 1.64
LIMS2-214ENST00000476932 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.31■■□□□ 1.64
LIMS2-214ENST00000476932 TATP17735 454 aaPredicted RBP25.3■■□□□ 1.64
LIMS2-214ENST00000476932 ST3GAL1Q11201 340 aa25.3■■□□□ 1.64
LIMS2-214ENST00000476932 METTL22Q9BUU2 404 aaPredicted RBP25.3■■□□□ 1.64
LIMS2-214ENST00000476932 SIL1Q9H173 461 aa25.3■■□□□ 1.64
LIMS2-214ENST00000476932 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.3■■□□□ 1.64
LIMS2-214ENST00000476932 STX6O43752 255 aa25.3■■□□□ 1.64
LIMS2-214ENST00000476932 COPS6Q7L5N1 327 aa25.3■■□□□ 1.64
LIMS2-214ENST00000476932 DDX17Q92841 729 aaKnown RBP25.3■■□□□ 1.64
LIMS2-214ENST00000476932 NAP1L5Q96NT1 182 aaPredicted RBP25.29■■□□□ 1.64
LIMS2-214ENST00000476932 PDRG1Q9NUG6 133 aa25.29■■□□□ 1.64
LIMS2-214ENST00000476932 RBM8AQ9Y5S9 174 aaKnown RBP25.29■■□□□ 1.64
LIMS2-214ENST00000476932 PARP4Q9UKK3 1724 aaKnown RBP25.29■■□□□ 1.64
LIMS2-214ENST00000476932 MED23Q9ULK4 1368 aa25.29■■□□□ 1.64
LIMS2-214ENST00000476932 MAP4K1Q92918 833 aa25.29■■□□□ 1.64
LIMS2-214ENST00000476932 MYD88Q99836 296 aa25.29■■□□□ 1.64
LIMS2-214ENST00000476932 NEXNQ0ZGT2 675 aa25.28■■□□□ 1.64
LIMS2-214ENST00000476932 HS1BP3Q53T59 392 aa25.28■■□□□ 1.64
LIMS2-214ENST00000476932 SMC3Q9UQE7 1217 aa25.28■■□□□ 1.64
LIMS2-214ENST00000476932 CNPY2Q9Y2B0 182 aa25.28■■□□□ 1.64
LIMS2-214ENST00000476932 A0A0D9SFI3 127 aa25.28■■□□□ 1.64
LIMS2-214ENST00000476932 CREB3L3Q68CJ9 461 aa25.28■■□□□ 1.64
LIMS2-214ENST00000476932 CYP46A1Q9Y6A2 500 aa25.28■■□□□ 1.64
LIMS2-214ENST00000476932 PLEKHG2Q9H7P9 1386 aa25.27■■□□□ 1.64
LIMS2-214ENST00000476932 JCADQ9P266 1359 aa25.27■■□□□ 1.64
LIMS2-214ENST00000476932 HIP1O00291 1037 aa25.27■■□□□ 1.64
LIMS2-214ENST00000476932 COL9A3Q14050 684 aaPredicted RBP25.27■■□□□ 1.64
LIMS2-214ENST00000476932 CCDC83Q8IWF9 413 aa25.27■■□□□ 1.64
LIMS2-214ENST00000476932 SYAP1Q96A49 352 aaPredicted RBP25.27■■□□□ 1.64
LIMS2-214ENST00000476932 F13A1P00488 732 aa25.26■■□□□ 1.63
LIMS2-214ENST00000476932 IFNL2Q8IZJ0 200 aa25.26■■□□□ 1.63
LIMS2-214ENST00000476932 USP16Q9Y5T5 823 aa25.26■■□□□ 1.63
LIMS2-214ENST00000476932 CYP27B1O15528 508 aa25.26■■□□□ 1.63
LIMS2-214ENST00000476932 BOLA2Q9H3K6 86 aa25.26■■□□□ 1.63
LIMS2-214ENST00000476932 RFX5P48382 616 aaPredicted RBP25.25■■□□□ 1.63
LIMS2-214ENST00000476932 DDX54Q8TDD1 881 aaKnown RBP25.25■■□□□ 1.63
LIMS2-214ENST00000476932 ZSCAN31Q96LW9 406 aaPredicted RBP25.25■■□□□ 1.63
LIMS2-214ENST00000476932 TSPY26PQ9H489 355 aa25.25■■□□□ 1.63
LIMS2-214ENST00000476932 SH2B1Q9NRF2 756 aaPredicted RBP25.25■■□□□ 1.63
LIMS2-214ENST00000476932 DCCP43146 1447 aa25.24■■□□□ 1.63
LIMS2-214ENST00000476932 SLC27A2O14975 620 aa25.24■■□□□ 1.63
LIMS2-214ENST00000476932 GJB2P29033 226 aa25.24■■□□□ 1.63
LIMS2-214ENST00000476932 PIP4K2AP48426 406 aaPredicted RBP25.24■■□□□ 1.63
LIMS2-214ENST00000476932 ME3Q16798 604 aa25.24■■□□□ 1.63
LIMS2-214ENST00000476932 DTNBO60941 627 aa25.24■■□□□ 1.63
LIMS2-214ENST00000476932 ANKRD13DQ6ZTN6 518 aa25.24■■□□□ 1.63
LIMS2-214ENST00000476932 RNF214Q8ND24 703 aa25.24■■□□□ 1.63
LIMS2-214ENST00000476932 COPRSQ9NQ92 184 aa25.24■■□□□ 1.63
LIMS2-214ENST00000476932 EIF2AK3Q9NZJ5 1116 aaKnown RBP25.24■■□□□ 1.63
LIMS2-214ENST00000476932 COL15A1P39059 1388 aa25.24■■□□□ 1.63
LIMS2-214ENST00000476932 SNRPA1P09661 255 aaKnown RBP25.23■■□□□ 1.63
LIMS2-214ENST00000476932 ZKSCAN1P17029 563 aaPredicted RBP25.23■■□□□ 1.63
LIMS2-214ENST00000476932 CABLES1Q8TDN4 633 aa25.23■■□□□ 1.63
LIMS2-214ENST00000476932 DCAF5Q96JK2 942 aa25.23■■□□□ 1.63
LIMS2-214ENST00000476932 FSD1Q9BTV5 496 aa25.23■■□□□ 1.63
LIMS2-214ENST00000476932 MTMR6Q9Y217 621 aa25.23■■□□□ 1.63
LIMS2-214ENST00000476932 TMEM94Q12767 1356 aa25.23■■□□□ 1.63
LIMS2-214ENST00000476932 TNS3Q68CZ2 1445 aa25.23■■□□□ 1.63
LIMS2-214ENST00000476932 RABL6Q3YEC7 729 aaPredicted RBP25.21■■□□□ 1.63
LIMS2-214ENST00000476932 JARID2Q92833 1246 aaPredicted RBP25.21■■□□□ 1.63
LIMS2-214ENST00000476932 TPCN1Q9ULQ1 816 aa25.21■■□□□ 1.63
LIMS2-214ENST00000476932 NOL7Q9UMY1 257 aaKnown RBP25.21■■□□□ 1.63
LIMS2-214ENST00000476932 TAF6LQ9Y6J9 622 aa25.21■■□□□ 1.63
LIMS2-214ENST00000476932 PHF14O94880 888 aa25.21■■□□□ 1.63
LIMS2-214ENST00000476932 PTPN12Q05209 780 aaKnown RBP25.21■■□□□ 1.63
LIMS2-214ENST00000476932 ZNF589Q86UQ0 364 aaPredicted RBP25.21■■□□□ 1.63
LIMS2-214ENST00000476932 NUP188Q5SRE5 1749 aa25.21■■□□□ 1.63
LIMS2-214ENST00000476932 ATF3P18847 181 aa25.2■■□□□ 1.63
LIMS2-214ENST00000476932 CHRNA2Q15822 529 aa25.2■■□□□ 1.63
LIMS2-214ENST00000476932 DBNLQ9UJU6 430 aaKnown RBP25.2■■□□□ 1.63
LIMS2-214ENST00000476932 CSB-PGBD3P0DP91 1061 aa25.2■■□□□ 1.62
LIMS2-214ENST00000476932 TTC5Q8N0Z6 440 aa25.2■■□□□ 1.62
LIMS2-214ENST00000476932 EDC3Q96F86 508 aaKnown RBP25.2■■□□□ 1.62
LIMS2-214ENST00000476932 TJP1Q07157 1748 aa25.19■■□□□ 1.62
LIMS2-214ENST00000476932 UBR2Q8IWV8 1755 aa25.19■■□□□ 1.62
LIMS2-214ENST00000476932 MSNP26038 577 aaKnown RBP25.19■■□□□ 1.62
LIMS2-214ENST00000476932 KCNJ4P48050 445 aa25.19■■□□□ 1.62
LIMS2-214ENST00000476932 UBE2HP62256 183 aa25.19■■□□□ 1.62
LIMS2-214ENST00000476932 NECAB1Q8N987 351 aa25.19■■□□□ 1.62
LIMS2-214ENST00000476932 FMNL2Q96PY5 1086 aa25.19■■□□□ 1.62
LIMS2-214ENST00000476932 TNNI3KQ59H18 835 aa25.18■■□□□ 1.62
LIMS2-214ENST00000476932 CCDC183Q5T5S1 534 aa25.18■■□□□ 1.62
LIMS2-214ENST00000476932 UBE3BQ7Z3V4 1068 aa25.18■■□□□ 1.62
LIMS2-214ENST00000476932 DNAJC5Q9H3Z4 198 aa25.18■■□□□ 1.62
LIMS2-214ENST00000476932 FPGT-TNNI3KV9GXZ4 949 aa25.18■■□□□ 1.62
LIMS2-214ENST00000476932 CASP7P55210 303 aa25.17■■□□□ 1.62
LIMS2-214ENST00000476932 ATP6V1DQ9Y5K8 247 aa25.17■■□□□ 1.62
LIMS2-214ENST00000476932 FIBPO43427 364 aa25.17■■□□□ 1.62
LIMS2-214ENST00000476932 ATP5JP18859 108 aa25.17■■□□□ 1.62
LIMS2-214ENST00000476932 TFCP2Q12800 502 aa25.17■■□□□ 1.62
LIMS2-214ENST00000476932 PSMA5P28066 241 aa25.16■■□□□ 1.62
LIMS2-214ENST00000476932 DNM1Q05193 864 aaKnown RBP25.16■■□□□ 1.62
LIMS2-214ENST00000476932 CPDO75976 1380 aa25.16■■□□□ 1.62
LIMS2-214ENST00000476932 TAF5LO75529 589 aa25.15■■□□□ 1.62
LIMS2-214ENST00000476932 ALDH8A1Q9H2A2 487 aaPredicted RBP25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms