RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 DDX54Q8TDD1 881 aaKnown RBP19.31■□□□□ 0.68
VARS2-207ENST00000476162 RUFY2Q8WXA3 655 aa19.31■□□□□ 0.68
VARS2-207ENST00000476162 CARD10Q9BWT7 1032 aa19.31■□□□□ 0.68
VARS2-207ENST00000476162 GLI3P10071 1580 aa19.3■□□□□ 0.68
VARS2-207ENST00000476162 A0A087WZG4 1122 aa19.3■□□□□ 0.68
VARS2-207ENST00000476162 RASEFQ8IZ41 740 aa19.3■□□□□ 0.68
VARS2-207ENST00000476162 PARP4Q9UKK3 1724 aaKnown RBP19.3■□□□□ 0.68
VARS2-207ENST00000476162 KDM4FA0A1W2PPD8 638 aa19.29■□□□□ 0.68
VARS2-207ENST00000476162 TPM2P07951 284 aa19.29■□□□□ 0.68
VARS2-207ENST00000476162 RBM10P98175 930 aaKnown RBP19.29■□□□□ 0.68
VARS2-207ENST00000476162 NKX1-1Q15270 411 aaPredicted RBP19.29■□□□□ 0.68
VARS2-207ENST00000476162 COPRSQ9NQ92 184 aa19.29■□□□□ 0.68
VARS2-207ENST00000476162 RFX5P48382 616 aaPredicted RBP19.28■□□□□ 0.68
VARS2-207ENST00000476162 EVA1CP58658 441 aa19.28■□□□□ 0.68
VARS2-207ENST00000476162 INTS4Q96HW7 963 aaKnown RBP19.28■□□□□ 0.68
VARS2-207ENST00000476162 ERBB4Q15303 1308 aa19.28■□□□□ 0.68
VARS2-207ENST00000476162 PTH1RQ03431 593 aa19.28■□□□□ 0.68
VARS2-207ENST00000476162 PTPN12Q05209 780 aaKnown RBP19.28■□□□□ 0.68
VARS2-207ENST00000476162 RABL6Q3YEC7 729 aaPredicted RBP19.28■□□□□ 0.68
VARS2-207ENST00000476162 BOLA2Q9H3K6 86 aa19.28■□□□□ 0.68
VARS2-207ENST00000476162 DDX49Q9Y6V7 483 aaKnown RBP19.28■□□□□ 0.68
VARS2-207ENST00000476162 A1BGP04217 495 aa19.27■□□□□ 0.68
VARS2-207ENST00000476162 TTLL7Q6ZT98 887 aa19.27■□□□□ 0.68
VARS2-207ENST00000476162 ESPNB1AK53 854 aa19.27■□□□□ 0.67
VARS2-207ENST00000476162 CASP7P55210 303 aa19.27■□□□□ 0.67
VARS2-207ENST00000476162 KLHL40Q2TBA0 621 aa19.26■□□□□ 0.67
VARS2-207ENST00000476162 FOXD4L5Q5VV16 416 aaPredicted RBP19.26■□□□□ 0.67
VARS2-207ENST00000476162 FOXD4L4Q8WXT5 416 aaPredicted RBP19.26■□□□□ 0.67
VARS2-207ENST00000476162 ARFGEF2Q9Y6D5 1785 aa19.26■□□□□ 0.67
VARS2-207ENST00000476162 COL15A1P39059 1388 aa19.26■□□□□ 0.67
VARS2-207ENST00000476162 FAM227BQ96M60 508 aa19.25■□□□□ 0.67
VARS2-207ENST00000476162 LMBRD1Q9NUN5 540 aa19.25■□□□□ 0.67
VARS2-207ENST00000476162 LAMB4A4D0S4 1761 aa19.25■□□□□ 0.67
VARS2-207ENST00000476162 MRE11P49959 708 aa19.25■□□□□ 0.67
VARS2-207ENST00000476162 TTC14Q96N46 770 aa19.25■□□□□ 0.67
VARS2-207ENST00000476162 AFDNP55196 1824 aaKnown RBP19.24■□□□□ 0.67
VARS2-207ENST00000476162 TFCP2Q12800 502 aa19.24■□□□□ 0.67
VARS2-207ENST00000476162 GAS2L3Q86XJ1 694 aa19.24■□□□□ 0.67
VARS2-207ENST00000476162 CHAMP1Q96JM3 812 aa19.24■□□□□ 0.67
VARS2-207ENST00000476162 HIP1O00291 1037 aa19.24■□□□□ 0.67
VARS2-207ENST00000476162 NMIQ13287 307 aaPredicted RBP19.24■□□□□ 0.67
VARS2-207ENST00000476162 GRPEL1Q9HAV7 217 aa19.24■□□□□ 0.67
VARS2-207ENST00000476162 KCPQ6ZWJ8 1503 aa19.24■□□□□ 0.67
VARS2-207ENST00000476162 TNNI3KQ59H18 835 aa19.23■□□□□ 0.67
VARS2-207ENST00000476162 PRPF40BQ6NWY9 871 aaKnown RBP19.23■□□□□ 0.67
VARS2-207ENST00000476162 LMBR1LQ6UX01 489 aa19.23■□□□□ 0.67
VARS2-207ENST00000476162 ISY1Q9ULR0 285 aaKnown RBP19.23■□□□□ 0.67
VARS2-207ENST00000476162 FPGT-TNNI3KV9GXZ4 949 aa19.23■□□□□ 0.67
VARS2-207ENST00000476162 H7C1W4 665 aa19.23■□□□□ 0.67
VARS2-207ENST00000476162 BRD1O95696 1058 aa19.23■□□□□ 0.67
VARS2-207ENST00000476162 CPA1P15085 419 aa19.23■□□□□ 0.67
VARS2-207ENST00000476162 CASTP20810 708 aaKnown RBP19.23■□□□□ 0.67
VARS2-207ENST00000476162 AK2P54819 239 aa19.23■□□□□ 0.67
VARS2-207ENST00000476162 FSD1Q9BTV5 496 aa19.23■□□□□ 0.67
VARS2-207ENST00000476162 DBNLQ9UJU6 430 aaKnown RBP19.23■□□□□ 0.67
VARS2-207ENST00000476162 CCDC171Q6TFL3 1326 aa19.22■□□□□ 0.67
VARS2-207ENST00000476162 PRPF40AO75400 957 aaKnown RBP19.22■□□□□ 0.67
VARS2-207ENST00000476162 LARP6Q9BRS8 491 aaKnown RBP19.22■□□□□ 0.67
VARS2-207ENST00000476162 ZBTB3Q9H5J0 574 aa19.22■□□□□ 0.67
VARS2-207ENST00000476162 ABCA3Q99758 1704 aa19.22■□□□□ 0.67
VARS2-207ENST00000476162 FOXO4P98177 505 aa19.21■□□□□ 0.67
VARS2-207ENST00000476162 NECTIN1Q15223 517 aa19.21■□□□□ 0.67
VARS2-207ENST00000476162 ADCK5Q3MIX3 580 aa19.21■□□□□ 0.67
VARS2-207ENST00000476162 CWC25Q9NXE8 425 aaPredicted RBP19.21■□□□□ 0.67
VARS2-207ENST00000476162 UBR2Q8IWV8 1755 aa19.21■□□□□ 0.67
VARS2-207ENST00000476162 RUFY3Q7L099 469 aa19.21■□□□□ 0.67
VARS2-207ENST00000476162 EDC3Q96F86 508 aaKnown RBP19.21■□□□□ 0.67
VARS2-207ENST00000476162 A0A0D9SFI3 127 aa19.2■□□□□ 0.66
VARS2-207ENST00000476162 NCLP19338 710 aaKnown RBP19.2■□□□□ 0.66
VARS2-207ENST00000476162 KCNB2Q92953 911 aa19.2■□□□□ 0.66
VARS2-207ENST00000476162 LIMCH1Q9UPQ0 1083 aa19.2■□□□□ 0.66
VARS2-207ENST00000476162 CHMP3Q9Y3E7 222 aa19.2■□□□□ 0.66
VARS2-207ENST00000476162 ATP5JP18859 108 aa19.2■□□□□ 0.66
VARS2-207ENST00000476162 JAKMIP1Q96N16 626 aaKnown RBP19.2■□□□□ 0.66
VARS2-207ENST00000476162 RBM8AQ9Y5S9 174 aaKnown RBP19.2■□□□□ 0.66
VARS2-207ENST00000476162 TNS2Q63HR2 1409 aa19.19■□□□□ 0.66
VARS2-207ENST00000476162 MAP4K1Q92918 833 aa19.19■□□□□ 0.66
VARS2-207ENST00000476162 SHANK3Q9BYB0 1731 aa19.19■□□□□ 0.66
VARS2-207ENST00000476162 SNRKQ9NRH2 765 aa19.19■□□□□ 0.66
VARS2-207ENST00000476162 TMOD3Q9NYL9 352 aa19.19■□□□□ 0.66
VARS2-207ENST00000476162 A0A0U1RQG5 324 aaPredicted RBP19.19■□□□□ 0.66
VARS2-207ENST00000476162 KCNJ4P48050 445 aa19.19■□□□□ 0.66
VARS2-207ENST00000476162 CREB3L3Q68CJ9 461 aa19.18■□□□□ 0.66
VARS2-207ENST00000476162 DBNDD2Q9BQY9 259 aa19.18■□□□□ 0.66
VARS2-207ENST00000476162 ZSWIM6Q9HCJ5 1215 aa19.18■□□□□ 0.66
VARS2-207ENST00000476162 PAPPAQ13219 1627 aa19.18■□□□□ 0.66
VARS2-207ENST00000476162 ZKSCAN1P17029 563 aaPredicted RBP19.17■□□□□ 0.66
VARS2-207ENST00000476162 CAVIN1Q6NZI2 390 aaKnown RBP19.17■□□□□ 0.66
VARS2-207ENST00000476162 CCDC191Q8NCU4 936 aa19.17■□□□□ 0.66
VARS2-207ENST00000476162 TM6SF1Q9BZW5 370 aa19.17■□□□□ 0.66
VARS2-207ENST00000476162 BTG4Q9NY30 223 aa19.17■□□□□ 0.66
VARS2-207ENST00000476162 NDUFB9Q9Y6M9 179 aa19.17■□□□□ 0.66
VARS2-207ENST00000476162 VPS53Q5VIR6 699 aa19.17■□□□□ 0.66
VARS2-207ENST00000476162 GPT2Q8TD30 523 aa19.17■□□□□ 0.66
VARS2-207ENST00000476162 PDRG1Q9NUG6 133 aa19.17■□□□□ 0.66
VARS2-207ENST00000476162 CYP46A1Q9Y6A2 500 aa19.16■□□□□ 0.66
VARS2-207ENST00000476162 ZNF589Q86UQ0 364 aaPredicted RBP19.16■□□□□ 0.66
VARS2-207ENST00000476162 ASAP1Q9ULH1 1129 aa19.16■□□□□ 0.66
VARS2-207ENST00000476162 ZNF330Q9Y3S2 320 aaPredicted RBP19.16■□□□□ 0.66
VARS2-207ENST00000476162 MED23Q9ULK4 1368 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms