RNA–Protein interactions for RNA: ENST00000476106.5

SOD1-204, Transcript of superoxide dismutase 1, humanhuman

TSL 5

Gene SOD1, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-204ENST00000476106 ERVV-1B6SEH8 477 aa17.59■□□□□ 0.41
SOD1-204ENST00000476106 SERPINB2P05120 415 aa17.59■□□□□ 0.41
SOD1-204ENST00000476106 TM4SF1P30408 202 aa17.59■□□□□ 0.41
SOD1-204ENST00000476106 CHMP4AQ9BY43 222 aa17.59■□□□□ 0.41
SOD1-204ENST00000476106 MYH3P11055 1940 aa17.59■□□□□ 0.41
SOD1-204ENST00000476106 CLEC4GQ6UXB4 293 aa17.58■□□□□ 0.4
SOD1-204ENST00000476106 GIGYF2Q6Y7W6 1299 aaKnown RBP17.58■□□□□ 0.4
SOD1-204ENST00000476106 RIC3Q7Z5B4 369 aa17.58■□□□□ 0.4
SOD1-204ENST00000476106 NBPF5PQ86XG9 351 aaPredicted RBP17.58■□□□□ 0.4
SOD1-204ENST00000476106 PLBD2Q8NHP8 589 aa17.58■□□□□ 0.4
SOD1-204ENST00000476106 UBN2Q6ZU65 1347 aa17.57■□□□□ 0.4
SOD1-204ENST00000476106 FKBP5Q13451 457 aaPredicted RBP17.57■□□□□ 0.4
SOD1-204ENST00000476106 ANKRD13DQ6ZTN6 518 aa17.57■□□□□ 0.4
SOD1-204ENST00000476106 TRMT2AQ8IZ69 625 aaKnown RBP17.57■□□□□ 0.4
SOD1-204ENST00000476106 CNBD1Q8NA66 436 aa17.57■□□□□ 0.4
SOD1-204ENST00000476106 ATP5J2-PTCD1G3V325 749 aa17.56■□□□□ 0.4
SOD1-204ENST00000476106 DDX58O95786 925 aaKnown RBP17.56■□□□□ 0.4
SOD1-204ENST00000476106 FLIIQ13045 1269 aa17.56■□□□□ 0.4
SOD1-204ENST00000476106 PXDNLA1KZ92 1463 aa17.56■□□□□ 0.4
SOD1-204ENST00000476106 TAF1P21675 1872 aa17.55■□□□□ 0.4
SOD1-204ENST00000476106 A0A0G2JLW4 131 aa17.55■□□□□ 0.4
SOD1-204ENST00000476106 MLLT1Q03111 559 aaPredicted RBP17.55■□□□□ 0.4
SOD1-204ENST00000476106 PRR5LQ6MZQ0 368 aa17.55■□□□□ 0.4
SOD1-204ENST00000476106 MYD88Q99836 296 aa17.55■□□□□ 0.4
SOD1-204ENST00000476106 SMC4Q9NTJ3 1288 aa17.55■□□□□ 0.4
SOD1-204ENST00000476106 MAP3K2Q9Y2U5 619 aa17.55■□□□□ 0.4
SOD1-204ENST00000476106 SPEF2Q9C093 1822 aa17.55■□□□□ 0.4
SOD1-204ENST00000476106 GTF2E1P29083 439 aaPredicted RBP17.54■□□□□ 0.4
SOD1-204ENST00000476106 ST5P78524 1137 aa17.54■□□□□ 0.4
SOD1-204ENST00000476106 HSP90AB3PQ58FF7 597 aa17.54■□□□□ 0.4
SOD1-204ENST00000476106 NUTM1Q86Y26 1132 aa17.54■□□□□ 0.4
SOD1-204ENST00000476106 SSH1Q8WYL5 1049 aa17.54■□□□□ 0.4
SOD1-204ENST00000476106 ARFGEF1Q9Y6D6 1849 aa17.54■□□□□ 0.4
SOD1-204ENST00000476106 ABCC12Q96J65 1359 aa17.53■□□□□ 0.4
SOD1-204ENST00000476106 PI4KAP2A4QPH2 592 aa17.53■□□□□ 0.4
SOD1-204ENST00000476106 PI4KAP1Q8N8J0 262 aa17.53■□□□□ 0.4
SOD1-204ENST00000476106 RNF181Q9P0P0 153 aa17.53■□□□□ 0.4
SOD1-204ENST00000476106 F6X3S4 739 aa17.52■□□□□ 0.4
SOD1-204ENST00000476106 FOXN1O15353 648 aa17.52■□□□□ 0.4
SOD1-204ENST00000476106 CHRNA5P30532 468 aa17.52■□□□□ 0.4
SOD1-204ENST00000476106 CTCFP49711 727 aaPredicted RBP17.52■□□□□ 0.4
SOD1-204ENST00000476106 TCIRG1Q13488 830 aa17.52■□□□□ 0.4
SOD1-204ENST00000476106 SUSD4Q5VX71 490 aa17.52■□□□□ 0.4
SOD1-204ENST00000476106 ZNF34Q8IZ26 560 aa17.52■□□□□ 0.4
SOD1-204ENST00000476106 RGL2O15211 777 aa17.51■□□□□ 0.39
SOD1-204ENST00000476106 VEGFAP15692 232 aaPredicted RBP17.51■□□□□ 0.39
SOD1-204ENST00000476106 RTL5Q5HYW3 569 aaPredicted RBP17.51■□□□□ 0.39
SOD1-204ENST00000476106 KSR2Q6VAB6 950 aa17.51■□□□□ 0.39
SOD1-204ENST00000476106 MRPL50Q8N5N7 158 aaKnown RBP17.51■□□□□ 0.39
SOD1-204ENST00000476106 AIDAQ96BJ3 306 aa17.51■□□□□ 0.39
SOD1-204ENST00000476106 NTSR2O95665 410 aa17.5■□□□□ 0.39
SOD1-204ENST00000476106 DPEP1P16444 411 aa17.5■□□□□ 0.39
SOD1-204ENST00000476106 ERFEQ4G0M1 354 aa17.5■□□□□ 0.39
SOD1-204ENST00000476106 PARP10Q53GL7 1025 aa17.5■□□□□ 0.39
SOD1-204ENST00000476106 PPP1R42Q7Z4L9 355 aa17.5■□□□□ 0.39
SOD1-204ENST00000476106 NLRP10Q86W26 655 aa17.5■□□□□ 0.39
SOD1-204ENST00000476106 ABHD8Q96I13 439 aa17.5■□□□□ 0.39
SOD1-204ENST00000476106 NYXQ9GZU5 481 aa17.5■□□□□ 0.39
SOD1-204ENST00000476106 IBTKQ9P2D0 1353 aaPredicted RBP17.5■□□□□ 0.39
SOD1-204ENST00000476106 SLX4Q8IY92 1834 aa17.49■□□□□ 0.39
SOD1-204ENST00000476106 NEXNQ0ZGT2 675 aa17.49■□□□□ 0.39
SOD1-204ENST00000476106 TPTE2Q6XPS3 522 aa17.49■□□□□ 0.39
SOD1-204ENST00000476106 DNAAF4Q8WXU2 420 aa17.49■□□□□ 0.39
SOD1-204ENST00000476106 METTL22Q9BUU2 404 aaPredicted RBP17.49■□□□□ 0.39
SOD1-204ENST00000476106 UTP14AQ9BVJ6 771 aaKnown RBP17.49■□□□□ 0.39
SOD1-204ENST00000476106 TRMT112Q9UI30 125 aaKnown RBP17.49■□□□□ 0.39
SOD1-204ENST00000476106 CCDC88AQ3V6T2 1871 aa17.49■□□□□ 0.39
SOD1-204ENST00000476106 CT47B1P0C2W7 299 aaPredicted RBP17.48■□□□□ 0.39
SOD1-204ENST00000476106 CWF19L2Q2TBE0 894 aaKnown RBP17.48■□□□□ 0.39
SOD1-204ENST00000476106 SLC4A10Q6U841 1118 aa17.48■□□□□ 0.39
SOD1-204ENST00000476106 C2CD5Q86YS7 1000 aa17.48■□□□□ 0.39
SOD1-204ENST00000476106 JARID2Q92833 1246 aaPredicted RBP17.48■□□□□ 0.39
SOD1-204ENST00000476106 ISCA1Q9BUE6 129 aa17.48■□□□□ 0.39
SOD1-204ENST00000476106 ZC3H4Q9UPT8 1303 aaKnown RBP17.47■□□□□ 0.39
SOD1-204ENST00000476106 RGS19P49795 217 aa17.47■□□□□ 0.39
SOD1-204ENST00000476106 RARSP54136 660 aaKnown RBP17.47■□□□□ 0.39
SOD1-204ENST00000476106 ALDH1L2Q3SY69 923 aa17.47■□□□□ 0.39
SOD1-204ENST00000476106 SYNE4Q8N205 404 aa17.47■□□□□ 0.39
SOD1-204ENST00000476106 CREBZFQ9NS37 354 aa17.47■□□□□ 0.39
SOD1-204ENST00000476106 PIM2Q9P1W9 311 aa17.47■□□□□ 0.39
SOD1-204ENST00000476106 MKRN1Q9UHC7 482 aaKnown RBP17.47■□□□□ 0.39
SOD1-204ENST00000476106 CWC25Q9NXE8 425 aaPredicted RBP17.46■□□□□ 0.39
SOD1-204ENST00000476106 BCAR3O75815 825 aa17.45■□□□□ 0.38
SOD1-204ENST00000476106 IGKV5-2P06315 115 aa17.45■□□□□ 0.38
SOD1-204ENST00000476106 HCLS1P14317 486 aaPredicted RBP17.45■□□□□ 0.38
SOD1-204ENST00000476106 PDE6BP35913 854 aa17.45■□□□□ 0.38
SOD1-204ENST00000476106 DALRD3Q5D0E6 543 aaKnown RBP17.45■□□□□ 0.38
SOD1-204ENST00000476106 FRAT1Q92837 279 aaPredicted RBP17.45■□□□□ 0.38
SOD1-204ENST00000476106 ZNF622Q969S3 477 aaKnown RBP eCLIP17.45■□□□□ 0.383e-13■□□□□ 10.8
SOD1-204ENST00000476106 FAM89AQ96GI7 184 aa17.45■□□□□ 0.38
SOD1-204ENST00000476106 BRIP1Q9BX63 1249 aa17.45■□□□□ 0.38
SOD1-204ENST00000476106 SH3TC1Q8TE82 1336 aa17.45■□□□□ 0.38
SOD1-204ENST00000476106 NEURL1BA8MQ27 555 aa17.44■□□□□ 0.38
SOD1-204ENST00000476106 H0YIN7 160 aa17.44■□□□□ 0.38
SOD1-204ENST00000476106 NOB1Q9ULX3 412 aaKnown RBP17.44■□□□□ 0.38
SOD1-204ENST00000476106 PTPRCP08575 1304 aa17.44■□□□□ 0.38
SOD1-204ENST00000476106 GLTPD2A6NH11 291 aa17.43■□□□□ 0.38
SOD1-204ENST00000476106 C3orf67Q6ZVT6 689 aa17.43■□□□□ 0.38
SOD1-204ENST00000476106 KIF16BQ96L93 1317 aa17.43■□□□□ 0.38
SOD1-204ENST00000476106 KCNA3P22001 575 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms