RNA–Protein interactions for RNA: ENST00000476098.5

BEST3-204, Transcript of bestrophin 3, humanhuman

TSL 3 BASIC

Gene BEST3, Length 1,692 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-204ENST00000476098 NUP188Q5SRE5 1749 aa14.62□□□□□ -0.07
BEST3-204ENST00000476098 ARFGEF2Q9Y6D5 1785 aa14.62□□□□□ -0.07
BEST3-204ENST00000476098 GYS1P13807 737 aa14.61□□□□□ -0.07
BEST3-204ENST00000476098 TBC1D9BQ66K14 1250 aa14.61□□□□□ -0.07
BEST3-204ENST00000476098 B4GALNT3Q6L9W6 998 aa14.61□□□□□ -0.07
BEST3-204ENST00000476098 LRRFIP2Q9Y608 721 aaKnown RBP14.61□□□□□ -0.07
BEST3-204ENST00000476098 PARP10Q53GL7 1025 aa14.61□□□□□ -0.07
BEST3-204ENST00000476098 SUSD4Q5VX71 490 aa14.61□□□□□ -0.07
BEST3-204ENST00000476098 UBE3BQ7Z3V4 1068 aa14.61□□□□□ -0.07
BEST3-204ENST00000476098 KAZALD1Q96I82 304 aa14.61□□□□□ -0.07
BEST3-204ENST00000476098 CCDC136Q96JN2 1154 aa14.61□□□□□ -0.07
BEST3-204ENST00000476098 PCCAP05165 728 aaPredicted RBP14.6□□□□□ -0.07
BEST3-204ENST00000476098 CEP85Q6P2H3 762 aa14.6□□□□□ -0.07
BEST3-204ENST00000476098 SIRT2Q8IXJ6 389 aa14.6□□□□□ -0.07
BEST3-204ENST00000476098 ZBTB38Q8NAP3 1195 aaPredicted RBP14.6□□□□□ -0.07
BEST3-204ENST00000476098 SUCLG2Q96I99 432 aa14.6□□□□□ -0.07
BEST3-204ENST00000476098 RTL5Q5HYW3 569 aaPredicted RBP14.59□□□□□ -0.07
BEST3-204ENST00000476098 BICDL1Q6ZP65 573 aa14.59□□□□□ -0.07
BEST3-204ENST00000476098 FAM89AQ96GI7 184 aa14.59□□□□□ -0.07
BEST3-204ENST00000476098 TRMT112Q9UI30 125 aaKnown RBP14.59□□□□□ -0.07
BEST3-204ENST00000476098 HDAC5Q9UQL6 1122 aa14.59□□□□□ -0.07
BEST3-204ENST00000476098 UBR3Q6ZT12 1888 aa14.59□□□□□ -0.07
BEST3-204ENST00000476098 IGHDP01880 384 aa14.58□□□□□ -0.07
BEST3-204ENST00000476098 RPAP2Q8IXW5 612 aaPredicted RBP14.58□□□□□ -0.07
BEST3-204ENST00000476098 SYNE4Q8N205 404 aa14.58□□□□□ -0.07
BEST3-204ENST00000476098 ANKRD44Q8N8A2 993 aa14.58□□□□□ -0.07
BEST3-204ENST00000476098 SETDB2Q96T68 719 aa14.58□□□□□ -0.07
BEST3-204ENST00000476098 UTP14AQ9BVJ6 771 aaKnown RBP14.58□□□□□ -0.07
BEST3-204ENST00000476098 N4BP2Q86UW6 1770 aaPredicted RBP14.58□□□□□ -0.08
BEST3-204ENST00000476098 MSH5O43196 834 aa14.58□□□□□ -0.08
BEST3-204ENST00000476098 HDAC1Q13547 482 aaPredicted RBP14.58□□□□□ -0.08
BEST3-204ENST00000476098 NFIXQ14938 502 aa14.58□□□□□ -0.08
BEST3-204ENST00000476098 EPHA10Q5JZY3 1008 aa14.58□□□□□ -0.08
BEST3-204ENST00000476098 FAM177BA6PVY3 158 aa14.57□□□□□ -0.08
BEST3-204ENST00000476098 NTSR2O95665 410 aa14.57□□□□□ -0.08
BEST3-204ENST00000476098 TM4SF1P30408 202 aa14.57□□□□□ -0.08
BEST3-204ENST00000476098 ATP8B2P98198 1209 aa14.57□□□□□ -0.08
BEST3-204ENST00000476098 PPP1R42Q7Z4L9 355 aa14.57□□□□□ -0.08
BEST3-204ENST00000476098 BICC1Q9H694 974 aaKnown RBP14.57□□□□□ -0.08
BEST3-204ENST00000476098 RWDD1Q9H446 243 aaPredicted RBP14.56□□□□□ -0.08
BEST3-204ENST00000476098 CDHR2Q9BYE9 1310 aa14.56□□□□□ -0.08
BEST3-204ENST00000476098 SH3TC1Q8TE82 1336 aa14.55□□□□□ -0.08
BEST3-204ENST00000476098 PNMA6EA0A0J9YXQ4 647 aa14.55□□□□□ -0.08
BEST3-204ENST00000476098 FOXO4P98177 505 aa14.55□□□□□ -0.08
BEST3-204ENST00000476098 MTX1Q13505 466 aa14.55□□□□□ -0.08
BEST3-204ENST00000476098 RABL6Q3YEC7 729 aaPredicted RBP14.55□□□□□ -0.08
BEST3-204ENST00000476098 NLGN1Q8N2Q7 840 aa14.55□□□□□ -0.08
BEST3-204ENST00000476098 PLA2G12BQ9BX93 195 aa14.55□□□□□ -0.08
BEST3-204ENST00000476098 NUP98P52948 1817 aa14.55□□□□□ -0.08
BEST3-204ENST00000476098 BCORQ6W2J9 1755 aa14.55□□□□□ -0.08
BEST3-204ENST00000476098 SCN7AQ01118 1682 aa14.55□□□□□ -0.08
BEST3-204ENST00000476098 KDM2BQ8NHM5 1336 aa14.55□□□□□ -0.08
BEST3-204ENST00000476098 IRS4O14654 1257 aaPredicted RBP14.55□□□□□ -0.08
BEST3-204ENST00000476098 NUTM1Q86Y26 1132 aa14.55□□□□□ -0.08
BEST3-204ENST00000476098 PDGFDQ9GZP0 370 aaPredicted RBP14.55□□□□□ -0.08
BEST3-204ENST00000476098 C4AP0C0L4 1744 aa14.54□□□□□ -0.08
BEST3-204ENST00000476098 NBPF5PQ86XG9 351 aaPredicted RBP14.54□□□□□ -0.08
BEST3-204ENST00000476098 SSH3Q8TE77 659 aa14.54□□□□□ -0.08
BEST3-204ENST00000476098 NYXQ9GZU5 481 aa14.54□□□□□ -0.08
BEST3-204ENST00000476098 CARMIL3Q8ND23 1372 aa14.53□□□□□ -0.08
BEST3-204ENST00000476098 SRGAP3O43295 1099 aa14.53□□□□□ -0.08
BEST3-204ENST00000476098 HCLS1P14317 486 aaPredicted RBP14.53□□□□□ -0.08
BEST3-204ENST00000476098 POLA2Q14181 598 aa14.53□□□□□ -0.08
BEST3-204ENST00000476098 ERFEQ4G0M1 354 aa14.53□□□□□ -0.08
BEST3-204ENST00000476098 TPTE2Q6XPS3 522 aa14.53□□□□□ -0.08
BEST3-204ENST00000476098 POLRMTO00411 1230 aaKnown RBP14.52□□□□□ -0.08
BEST3-204ENST00000476098 HMMRO75330 724 aa14.52□□□□□ -0.08
BEST3-204ENST00000476098 CSF1RP07333 972 aa14.52□□□□□ -0.08
BEST3-204ENST00000476098 DDR1Q08345 913 aa14.52□□□□□ -0.08
BEST3-204ENST00000476098 SLC10A5Q5PT55 438 aa14.52□□□□□ -0.08
BEST3-204ENST00000476098 LMBR1LQ6UX01 489 aa14.52□□□□□ -0.08
BEST3-204ENST00000476098 CENPQQ7L2Z9 268 aaPredicted RBP14.52□□□□□ -0.08
BEST3-204ENST00000476098 PDE8AO60658 829 aa14.52□□□□□ -0.09
BEST3-204ENST00000476098 SERPINB2P05120 415 aa14.51□□□□□ -0.09
BEST3-204ENST00000476098 GTF2E1P29083 439 aaPredicted RBP14.51□□□□□ -0.09
BEST3-204ENST00000476098 MSL1Q68DK7 614 aa14.51□□□□□ -0.09
BEST3-204ENST00000476098 TTLL11Q8NHH1 800 aa14.51□□□□□ -0.09
BEST3-204ENST00000476098 DCTPP1Q9H773 170 aa14.51□□□□□ -0.09
BEST3-204ENST00000476098 ANKRD36CQ5JPF3 1778 aa14.51□□□□□ -0.09
BEST3-204ENST00000476098 HSP90B1P14625 803 aaKnown RBP14.5□□□□□ -0.09
BEST3-204ENST00000476098 CTSWP56202 376 aa14.5□□□□□ -0.09
BEST3-204ENST00000476098 PRR5LQ6MZQ0 368 aa14.5□□□□□ -0.09
BEST3-204ENST00000476098 SMC5Q8IY18 1101 aa14.5□□□□□ -0.09
BEST3-204ENST00000476098 AFDNP55196 1824 aaKnown RBP14.5□□□□□ -0.09
BEST3-204ENST00000476098 TUBGCP6Q96RT7 1819 aa14.5□□□□□ -0.09
BEST3-204ENST00000476098 MMP10P09238 476 aa14.49□□□□□ -0.09
BEST3-204ENST00000476098 RFX5P48382 616 aaPredicted RBP14.49□□□□□ -0.09
BEST3-204ENST00000476098 CCDC24Q8N4L8 307 aa14.49□□□□□ -0.09
BEST3-204ENST00000476098 CNBD1Q8NA66 436 aa14.49□□□□□ -0.09
BEST3-204ENST00000476098 SLC16A10Q8TF71 515 aa14.49□□□□□ -0.09
BEST3-204ENST00000476098 ABCC12Q96J65 1359 aa14.49□□□□□ -0.09
BEST3-204ENST00000476098 R3HDM1Q15032 1099 aaKnown RBP14.49□□□□□ -0.09
BEST3-204ENST00000476098 C3orf67Q6ZVT6 689 aa14.49□□□□□ -0.09
BEST3-204ENST00000476098 GCC1Q96CN9 775 aa14.49□□□□□ -0.09
BEST3-204ENST00000476098 PTPN12Q05209 780 aaKnown RBP14.48□□□□□ -0.09
BEST3-204ENST00000476098 FAM161AQ3B820 660 aa14.48□□□□□ -0.09
BEST3-204ENST00000476098 CCDC85AQ96PX6 553 aaPredicted RBP14.48□□□□□ -0.09
BEST3-204ENST00000476098 GREM2Q9H772 168 aa14.48□□□□□ -0.09
BEST3-204ENST00000476098 PA2G4Q9UQ80 394 aaKnown RBP14.48□□□□□ -0.09
BEST3-204ENST00000476098 NOP58Q9Y2X3 529 aaKnown RBP14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms