RNA–Protein interactions for RNA: ENST00000475996.1

HLA-F-224, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 1,505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-224ENST00000475996 RGL2O15211 777 aa16.14■□□□□ 0.17
HLA-F-224ENST00000475996 TRIM28Q13263 835 aaKnown RBP16.14■□□□□ 0.17
HLA-F-224ENST00000475996 RTL5Q5HYW3 569 aaPredicted RBP16.14■□□□□ 0.17
HLA-F-224ENST00000475996 C9orf78Q9NZ63 289 aaPredicted RBP16.14■□□□□ 0.17
HLA-F-224ENST00000475996 ZBTB7BO15156 539 aaPredicted RBP16.13■□□□□ 0.17
HLA-F-224ENST00000475996 NFIXQ14938 502 aa16.13■□□□□ 0.17
HLA-F-224ENST00000475996 PARP10Q53GL7 1025 aa16.13■□□□□ 0.17
HLA-F-224ENST00000475996 SUSD4Q5VX71 490 aa16.13■□□□□ 0.17
HLA-F-224ENST00000475996 SETDB2Q96T68 719 aa16.13■□□□□ 0.17
HLA-F-224ENST00000475996 USP44Q9H0E7 712 aa16.13■□□□□ 0.17
HLA-F-224ENST00000475996 GRM8O00222 908 aa16.12■□□□□ 0.17
HLA-F-224ENST00000475996 NBPF7P0C2Y1 421 aaPredicted RBP16.11■□□□□ 0.17
HLA-F-224ENST00000475996 C1orf115Q9H7X2 142 aa16.11■□□□□ 0.17
HLA-F-224ENST00000475996 TRMT112Q9UI30 125 aaKnown RBP16.11■□□□□ 0.17
HLA-F-224ENST00000475996 COL24A1Q17RW2 1714 aa16.1■□□□□ 0.17
HLA-F-224ENST00000475996 NTSR2O95665 410 aa16.1■□□□□ 0.17
HLA-F-224ENST00000475996 UBTFL1P0CB47 393 aaPredicted RBP16.1■□□□□ 0.17
HLA-F-224ENST00000475996 TM4SF1P30408 202 aa16.1■□□□□ 0.17
HLA-F-224ENST00000475996 UBE3BQ7Z3V4 1068 aa16.1■□□□□ 0.17
HLA-F-224ENST00000475996 PPP1R42Q7Z4L9 355 aa16.1■□□□□ 0.17
HLA-F-224ENST00000475996 SYNE4Q8N205 404 aa16.1■□□□□ 0.17
HLA-F-224ENST00000475996 NLGN1Q8N2Q7 840 aa16.1■□□□□ 0.17
HLA-F-224ENST00000475996 FAM89AQ96GI7 184 aa16.1■□□□□ 0.17
HLA-F-224ENST00000475996 UTP14AQ9BVJ6 771 aaKnown RBP16.1■□□□□ 0.17
HLA-F-224ENST00000475996 CASZ1Q86V15 1759 aa16.1■□□□□ 0.17
HLA-F-224ENST00000475996 CARMIL3Q8ND23 1372 aa16.09■□□□□ 0.17
HLA-F-224ENST00000475996 ZBTB7AO95365 584 aa16.09■□□□□ 0.17
HLA-F-224ENST00000475996 GNAI3P08754 354 aa16.09■□□□□ 0.17
HLA-F-224ENST00000475996 DDR1Q08345 913 aa16.09■□□□□ 0.17
HLA-F-224ENST00000475996 NBPF5PQ86XG9 351 aaPredicted RBP16.09■□□□□ 0.17
HLA-F-224ENST00000475996 NUTM1Q86Y26 1132 aa16.09■□□□□ 0.17
HLA-F-224ENST00000475996 ZBTB38Q8NAP3 1195 aaPredicted RBP16.09■□□□□ 0.17
HLA-F-224ENST00000475996 ZBTB40Q9NUA8 1239 aa16.09■□□□□ 0.17
HLA-F-224ENST00000475996 H7C1W4 665 aa16.09■□□□□ 0.17
HLA-F-224ENST00000475996 POLRMTO00411 1230 aaKnown RBP16.09■□□□□ 0.17
HLA-F-224ENST00000475996 SOCS7O14512 581 aa16.09■□□□□ 0.17
HLA-F-224ENST00000475996 PCCAP05165 728 aaPredicted RBP16.09■□□□□ 0.17
HLA-F-224ENST00000475996 MMP10P09238 476 aa16.09■□□□□ 0.17
HLA-F-224ENST00000475996 CASP7P55210 303 aa16.09■□□□□ 0.17
HLA-F-224ENST00000475996 CCDC24Q8N4L8 307 aa16.09■□□□□ 0.17
HLA-F-224ENST00000475996 SUCLG2Q96I99 432 aa16.09■□□□□ 0.17
HLA-F-224ENST00000475996 UTYO14607 1347 aa16.08■□□□□ 0.17
HLA-F-224ENST00000475996 IBTKQ9P2D0 1353 aaPredicted RBP16.08■□□□□ 0.16
HLA-F-224ENST00000475996 NPHP1O15259 732 aa16.08■□□□□ 0.16
HLA-F-224ENST00000475996 SLC16A10Q8TF71 515 aa16.08■□□□□ 0.16
HLA-F-224ENST00000475996 CHMP4BQ9H444 224 aaKnown RBP16.08■□□□□ 0.16
HLA-F-224ENST00000475996 LRRFIP2Q9Y608 721 aaKnown RBP16.08■□□□□ 0.16
HLA-F-224ENST00000475996 GNAI2P04899 355 aa16.07■□□□□ 0.16
HLA-F-224ENST00000475996 SERPINB2P05120 415 aa16.07■□□□□ 0.16
HLA-F-224ENST00000475996 GTF2E1P29083 439 aaPredicted RBP16.07■□□□□ 0.16
HLA-F-224ENST00000475996 ERFEQ4G0M1 354 aa16.07■□□□□ 0.16
HLA-F-224ENST00000475996 NYXQ9GZU5 481 aa16.07■□□□□ 0.16
HLA-F-224ENST00000475996 SH3TC1Q8TE82 1336 aa16.07■□□□□ 0.16
HLA-F-224ENST00000475996 IRS4O14654 1257 aaPredicted RBP16.06■□□□□ 0.16
HLA-F-224ENST00000475996 HCLS1P14317 486 aaPredicted RBP16.06■□□□□ 0.16
HLA-F-224ENST00000475996 ATF5Q9Y2D1 282 aaPredicted RBP16.06■□□□□ 0.16
HLA-F-224ENST00000475996 PARP3Q9Y6F1 533 aa16.06■□□□□ 0.16
HLA-F-224ENST00000475996 ABCC12Q96J65 1359 aa16.06■□□□□ 0.16
HLA-F-224ENST00000475996 EPHA10Q5JZY3 1008 aa16.05■□□□□ 0.16
HLA-F-224ENST00000475996 TPTE2Q6XPS3 522 aa16.05■□□□□ 0.16
HLA-F-224ENST00000475996 PPP4R3CPQ6ZMV5 832 aa16.05■□□□□ 0.16
HLA-F-224ENST00000475996 CNBD1Q8NA66 436 aa16.05■□□□□ 0.16
HLA-F-224ENST00000475996 KAZALD1Q96I82 304 aa16.05■□□□□ 0.16
HLA-F-224ENST00000475996 CDHR2Q9BYE9 1310 aa16.05■□□□□ 0.16
HLA-F-224ENST00000475996 PRR5LQ6MZQ0 368 aa16.04■□□□□ 0.16
HLA-F-224ENST00000475996 BICC1Q9H694 974 aaKnown RBP16.04■□□□□ 0.16
HLA-F-224ENST00000475996 DDX60Q8IY21 1712 aaKnown RBP16.04■□□□□ 0.16
HLA-F-224ENST00000475996 MTFR1LQ9H019 292 aa16.04■□□□□ 0.16
HLA-F-224ENST00000475996 PCDHB15Q9Y5E8 787 aa16.04■□□□□ 0.16
HLA-F-224ENST00000475996 MYH3P11055 1940 aa16.03■□□□□ 0.16
HLA-F-224ENST00000475996 GTF3C3Q9Y5Q9 886 aa16.03■□□□□ 0.16
HLA-F-224ENST00000475996 NRXN2Q9P2S2 1712 aa16.02■□□□□ 0.16
HLA-F-224ENST00000475996 LAMB2P55268 1798 aa16.02■□□□□ 0.16
HLA-F-224ENST00000475996 PDE8AO60658 829 aa16.02■□□□□ 0.15
HLA-F-224ENST00000475996 ST5P78524 1137 aa16.02■□□□□ 0.15
HLA-F-224ENST00000475996 FOXO4P98177 505 aa16.02■□□□□ 0.15
HLA-F-224ENST00000475996 AAMPQ13685 434 aa16.02■□□□□ 0.15
HLA-F-224ENST00000475996 CEP85Q6P2H3 762 aa16.02■□□□□ 0.15
HLA-F-224ENST00000475996 ANKRD44Q8N8A2 993 aa16.02■□□□□ 0.15
HLA-F-224ENST00000475996 CCDC85AQ96PX6 553 aaPredicted RBP16.02■□□□□ 0.15
HLA-F-224ENST00000475996 PLA2G12BQ9BX93 195 aa16.02■□□□□ 0.15
HLA-F-224ENST00000475996 HDAC5Q9UQL6 1122 aa16.02■□□□□ 0.15
HLA-F-224ENST00000475996 LMBR1LQ6UX01 489 aa16.01■□□□□ 0.15
HLA-F-224ENST00000475996 C3orf67Q6ZVT6 689 aa16.01■□□□□ 0.15
HLA-F-224ENST00000475996 CHMP3Q9Y3E7 222 aa16.01■□□□□ 0.15
HLA-F-224ENST00000475996 CTSWP56202 376 aa16■□□□□ 0.15
HLA-F-224ENST00000475996 SLC10A5Q5PT55 438 aa16■□□□□ 0.15
HLA-F-224ENST00000475996 TNRC6CQ9HCJ0 1690 aaKnown RBP16■□□□□ 0.15
HLA-F-224ENST00000475996 PNMA6EA0A0J9YXQ4 647 aa15.99■□□□□ 0.15
HLA-F-224ENST00000475996 POLD1P28340 1107 aa15.99■□□□□ 0.15
HLA-F-224ENST00000475996 ERICH6BQ5W0A0 696 aa15.99■□□□□ 0.15
HLA-F-224ENST00000475996 ANKRD31Q8N7Z5 1873 aa15.99■□□□□ 0.15
HLA-F-224ENST00000475996 HSP90B1P14625 803 aaKnown RBP15.99■□□□□ 0.15
HLA-F-224ENST00000475996 ATP8B2P98198 1209 aa15.99■□□□□ 0.15
HLA-F-224ENST00000475996 RABL6Q3YEC7 729 aaPredicted RBP15.99■□□□□ 0.15
HLA-F-224ENST00000475996 SIRT2Q8IXJ6 389 aa15.99■□□□□ 0.15
HLA-F-224ENST00000475996 NLRP3Q96P20 1036 aa15.99■□□□□ 0.15
HLA-F-224ENST00000475996 SRGAP3O43295 1099 aa15.98■□□□□ 0.15
HLA-F-224ENST00000475996 FAM161AQ3B820 660 aa15.98■□□□□ 0.15
HLA-F-224ENST00000475996 RPAP2Q8IXW5 612 aaPredicted RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms