RNA–Protein interactions for RNA: ENST00000475875.1

CSNK2B-207, Transcript of casein kinase 2 beta, humanhuman

TSL 1 (best)

Gene CSNK2B, Length 590 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2B-207ENST00000475875 NIP7Q9Y221 180 aaKnown RBP eCLIP19.65■□□□□ 0.74
CSNK2B-207ENST00000475875 HMOX1P09601 288 aa19.64■□□□□ 0.73
CSNK2B-207ENST00000475875 NIM1KQ8IY84 436 aa19.64■□□□□ 0.73
CSNK2B-207ENST00000475875 VPS33BQ9H267 617 aa19.64■□□□□ 0.73
CSNK2B-207ENST00000475875 CDHR2Q9BYE9 1310 aa19.64■□□□□ 0.73
CSNK2B-207ENST00000475875 GLIS2Q9BZE0 524 aaPredicted RBP19.63■□□□□ 0.73
CSNK2B-207ENST00000475875 CDC37L1Q7L3B6 337 aa19.62■□□□□ 0.73
CSNK2B-207ENST00000475875 IL17REQ8NFR9 667 aa19.62■□□□□ 0.73
CSNK2B-207ENST00000475875 POLR3GLQ9BT43 218 aa19.62■□□□□ 0.73
CSNK2B-207ENST00000475875 KIF7Q2M1P5 1343 aa19.61■□□□□ 0.73
CSNK2B-207ENST00000475875 GTF2E1P29083 439 aaPredicted RBP19.61■□□□□ 0.73
CSNK2B-207ENST00000475875 HOXA10P31260 410 aaPredicted RBP19.61■□□□□ 0.73
CSNK2B-207ENST00000475875 NBPF15Q8N660 670 aa19.61■□□□□ 0.73
CSNK2B-207ENST00000475875 GNAT3A8MTJ3 354 aa19.6■□□□□ 0.73
CSNK2B-207ENST00000475875 CTU1Q7Z7A3 348 aaKnown RBP19.6■□□□□ 0.73
CSNK2B-207ENST00000475875 GAS2L2Q8NHY3 880 aa19.6■□□□□ 0.73
CSNK2B-207ENST00000475875 ZIC5Q96T25 663 aa19.6■□□□□ 0.73
CSNK2B-207ENST00000475875 NYXQ9GZU5 481 aa19.6■□□□□ 0.73
CSNK2B-207ENST00000475875 SIPA1L3O60292 1781 aaPredicted RBP19.6■□□□□ 0.73
CSNK2B-207ENST00000475875 RIC1Q4ADV7 1423 aa19.59■□□□□ 0.73
CSNK2B-207ENST00000475875 NPC1L1Q9UHC9 1359 aa19.59■□□□□ 0.73
CSNK2B-207ENST00000475875 HUNKP57058 714 aa19.59■□□□□ 0.73
CSNK2B-207ENST00000475875 CCDC102AQ96A19 550 aa19.59■□□□□ 0.73
CSNK2B-207ENST00000475875 ZNF408Q9H9D4 720 aa19.59■□□□□ 0.73
CSNK2B-207ENST00000475875 TRIM26Q12899 539 aaPredicted RBP19.58■□□□□ 0.72
CSNK2B-207ENST00000475875 USP16Q9Y5T5 823 aa19.58■□□□□ 0.72
CSNK2B-207ENST00000475875 CEMIPQ8WUJ3 1361 aa19.57■□□□□ 0.72
CSNK2B-207ENST00000475875 PPIP5K2O43314 1243 aa19.57■□□□□ 0.72
CSNK2B-207ENST00000475875 RPGRQ92834 1020 aaKnown RBP19.57■□□□□ 0.72
CSNK2B-207ENST00000475875 CRAMP1Q96RY5 1269 aa19.57■□□□□ 0.72
CSNK2B-207ENST00000475875 ZNRF3Q9ULT6 936 aa19.57■□□□□ 0.72
CSNK2B-207ENST00000475875 FAM177BA6PVY3 158 aa19.56■□□□□ 0.72
CSNK2B-207ENST00000475875 BTBD11A6QL63 1104 aa19.56■□□□□ 0.72
CSNK2B-207ENST00000475875 FAM155AB1AL88 458 aaPredicted RBP19.56■□□□□ 0.72
CSNK2B-207ENST00000475875 GMPSP49915 693 aaPredicted RBP19.56■□□□□ 0.72
CSNK2B-207ENST00000475875 CXCL9Q07325 125 aa19.56■□□□□ 0.72
CSNK2B-207ENST00000475875 PKN2Q16513 984 aaKnown RBP19.56■□□□□ 0.72
CSNK2B-207ENST00000475875 RGMBQ6NW40 437 aa19.56■□□□□ 0.72
CSNK2B-207ENST00000475875 RNF186Q9NXI6 227 aa19.56■□□□□ 0.72
CSNK2B-207ENST00000475875 ABCC12Q96J65 1359 aa19.56■□□□□ 0.72
CSNK2B-207ENST00000475875 DIAPH1O60610 1272 aaKnown RBP19.55■□□□□ 0.72
CSNK2B-207ENST00000475875 SNRPA1P09661 255 aaKnown RBP19.55■□□□□ 0.72
CSNK2B-207ENST00000475875 PIP4K2AP48426 406 aaPredicted RBP19.55■□□□□ 0.72
CSNK2B-207ENST00000475875 KNSTRNQ9Y448 316 aa19.55■□□□□ 0.72
CSNK2B-207ENST00000475875 IBTKQ9P2D0 1353 aaPredicted RBP19.55■□□□□ 0.72
CSNK2B-207ENST00000475875 PPEF1O14829 653 aaPredicted RBP19.54■□□□□ 0.72
CSNK2B-207ENST00000475875 HIRAP54198 1017 aaPredicted RBP19.54■□□□□ 0.72
CSNK2B-207ENST00000475875 REM2Q8IYK8 340 aaPredicted RBP19.54■□□□□ 0.72
CSNK2B-207ENST00000475875 SUPT20HQ8NEM7 779 aa19.54■□□□□ 0.72
CSNK2B-207ENST00000475875 RBM17Q96I25 401 aaKnown RBP19.54■□□□□ 0.72
CSNK2B-207ENST00000475875 TMX4Q9H1E5 349 aaPredicted RBP19.54■□□□□ 0.72
CSNK2B-207ENST00000475875 TRPA1O75762 1119 aa19.53■□□□□ 0.72
CSNK2B-207ENST00000475875 KIF23Q02241 960 aaPredicted RBP19.53■□□□□ 0.72
CSNK2B-207ENST00000475875 AOC3Q16853 763 aa19.53■□□□□ 0.72
CSNK2B-207ENST00000475875 HPS5Q9UPZ3 1129 aa19.53■□□□□ 0.72
CSNK2B-207ENST00000475875 KCNQ3O43525 872 aa19.52■□□□□ 0.72
CSNK2B-207ENST00000475875 TNIP1Q15025 636 aa19.52■□□□□ 0.72
CSNK2B-207ENST00000475875 RTFDC1Q9BY42 306 aaPredicted RBP19.52■□□□□ 0.72
CSNK2B-207ENST00000475875 NBPF26B4DH59 902 aa19.51■□□□□ 0.71
CSNK2B-207ENST00000475875 HLFQ16534 295 aa19.51■□□□□ 0.71
CSNK2B-207ENST00000475875 NBPF10Q6P3W6 841 aaKnown RBP19.51■□□□□ 0.71
CSNK2B-207ENST00000475875 C2orf69Q8N8R5 385 aa19.51■□□□□ 0.71
CSNK2B-207ENST00000475875 BCL2L13Q9BXK5 485 aa19.51■□□□□ 0.71
CSNK2B-207ENST00000475875 GBA2Q9HCG7 927 aaPredicted RBP19.51■□□□□ 0.71
CSNK2B-207ENST00000475875 ERVV-1B6SEH8 477 aa19.5■□□□□ 0.71
CSNK2B-207ENST00000475875 HABP4Q5JVS0 413 aaKnown RBP19.5■□□□□ 0.71
CSNK2B-207ENST00000475875 USP48Q86UV5 1035 aa19.5■□□□□ 0.71
CSNK2B-207ENST00000475875 NUTM1Q86Y26 1132 aa19.5■□□□□ 0.71
CSNK2B-207ENST00000475875 TRPM4Q8TD43 1214 aa19.5■□□□□ 0.71
CSNK2B-207ENST00000475875 ATP6V0A2Q9Y487 856 aa19.5■□□□□ 0.71
CSNK2B-207ENST00000475875 H7C1D1 291 aa19.49■□□□□ 0.71
CSNK2B-207ENST00000475875 ZNF157P51786 506 aaPredicted RBP19.49■□□□□ 0.71
CSNK2B-207ENST00000475875 AMER1Q5JTC6 1135 aaPredicted RBP19.49■□□□□ 0.71
CSNK2B-207ENST00000475875 PRAMEF22A3QJZ6 481 aa19.48■□□□□ 0.71
CSNK2B-207ENST00000475875 SLC10A3P09131 477 aa19.48■□□□□ 0.71
CSNK2B-207ENST00000475875 CNOT7Q9UIV1 285 aaKnown RBP19.48■□□□□ 0.71
CSNK2B-207ENST00000475875 TIMELESSQ9UNS1 1208 aa19.48■□□□□ 0.71
CSNK2B-207ENST00000475875 AKAP11Q9UKA4 1901 aa19.47■□□□□ 0.71
CSNK2B-207ENST00000475875 KIAA2012Q0VF49 1180 aa19.47■□□□□ 0.71
CSNK2B-207ENST00000475875 DPF2Q92785 391 aa19.47■□□□□ 0.71
CSNK2B-207ENST00000475875 CSRNP1Q96S65 589 aa19.47■□□□□ 0.71
CSNK2B-207ENST00000475875 KRT26Q7Z3Y9 468 aa19.46■□□□□ 0.71
CSNK2B-207ENST00000475875 TCERG1O14776 1098 aaKnown RBP19.44■□□□□ 0.7
CSNK2B-207ENST00000475875 RAD17O75943 681 aa19.44■□□□□ 0.7
CSNK2B-207ENST00000475875 MICALL2Q8IY33 904 aa19.44■□□□□ 0.7
CSNK2B-207ENST00000475875 MAP3K15Q6ZN16 1313 aa19.44■□□□□ 0.7
CSNK2B-207ENST00000475875 NOM1Q5C9Z4 860 aaKnown RBP19.43■□□□□ 0.7
CSNK2B-207ENST00000475875 DPP8Q6V1X1 898 aaPredicted RBP19.43■□□□□ 0.7
CSNK2B-207ENST00000475875 SLC51AQ86UW1 340 aa19.43■□□□□ 0.7
CSNK2B-207ENST00000475875 NLRP3Q96P20 1036 aa19.43■□□□□ 0.7
CSNK2B-207ENST00000475875 HDAC9Q9UKV0 1011 aa19.43■□□□□ 0.7
CSNK2B-207ENST00000475875 BBOX1O75936 387 aa19.42■□□□□ 0.7
CSNK2B-207ENST00000475875 DCPSQ96C86 337 aaKnown RBP19.42■□□□□ 0.7
CSNK2B-207ENST00000475875 UBN2Q6ZU65 1347 aa19.42■□□□□ 0.7
CSNK2B-207ENST00000475875 MKI67P46013 3256 aaKnown RBP19.42■□□□□ 0.7
CSNK2B-207ENST00000475875 NTSR2O95665 410 aa19.41■□□□□ 0.7
CSNK2B-207ENST00000475875 EIF4G2P78344 907 aaKnown RBP eCLIP19.41■□□□□ 0.7
CSNK2B-207ENST00000475875 SUSD4Q5VX71 490 aa19.41■□□□□ 0.7
CSNK2B-207ENST00000475875 FBXO46Q6PJ61 603 aaPredicted RBP19.41■□□□□ 0.7
CSNK2B-207ENST00000475875 KIF6Q6ZMV9 814 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms