RNA–Protein interactions for RNA: ENST00000475716.5

SNX5-208, Transcript of sorting nexin 5, humanhuman

TSL 3

Gene SNX5, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-208ENST00000475716 ZNF652Q9Y2D9 606 aa13.48□□□□□ -0.25
SNX5-208ENST00000475716 ARFGEF2Q9Y6D5 1785 aa13.48□□□□□ -0.25
SNX5-208ENST00000475716 SNED1Q8TER0 1413 aa13.47□□□□□ -0.25
SNX5-208ENST00000475716 U2SURPO15042 1029 aaKnown RBP13.47□□□□□ -0.25
SNX5-208ENST00000475716 GTF2E1P29083 439 aaPredicted RBP13.47□□□□□ -0.25
SNX5-208ENST00000475716 EIF4G2P78344 907 aaKnown RBP eCLIP13.47□□□□□ -0.25
SNX5-208ENST00000475716 NUTM1Q86Y26 1132 aa13.47□□□□□ -0.25
SNX5-208ENST00000475716 PHACTR3Q96KR7 559 aa13.47□□□□□ -0.25
SNX5-208ENST00000475716 GLIS2Q9BZE0 524 aaPredicted RBP13.47□□□□□ -0.25
SNX5-208ENST00000475716 CASP8AP2Q9UKL3 1982 aa13.46□□□□□ -0.25
SNX5-208ENST00000475716 DLK2Q6UY11 383 aa13.46□□□□□ -0.25
SNX5-208ENST00000475716 GAS2L2Q8NHY3 880 aa13.46□□□□□ -0.25
SNX5-208ENST00000475716 CA12O43570 354 aa13.45□□□□□ -0.26
SNX5-208ENST00000475716 SNRPA1P09661 255 aaKnown RBP13.45□□□□□ -0.26
SNX5-208ENST00000475716 BRPF1P55201 1214 aaPredicted RBP13.45□□□□□ -0.26
SNX5-208ENST00000475716 CRY2Q49AN0 593 aa13.45□□□□□ -0.26
SNX5-208ENST00000475716 CC2D1BQ5T0F9 858 aaKnown RBP13.45□□□□□ -0.26
SNX5-208ENST00000475716 ZNF408Q9H9D4 720 aa13.45□□□□□ -0.26
SNX5-208ENST00000475716 ADARB2Q9NS39 739 aaKnown RBP13.45□□□□□ -0.26
SNX5-208ENST00000475716 THSD7BQ9C0I4 1608 aa13.44□□□□□ -0.26
SNX5-208ENST00000475716 HIRAP54198 1017 aaPredicted RBP13.44□□□□□ -0.26
SNX5-208ENST00000475716 SOX10P56693 466 aa13.44□□□□□ -0.26
SNX5-208ENST00000475716 CNGB1Q14028 1251 aaPredicted RBP13.44□□□□□ -0.26
SNX5-208ENST00000475716 CC2D2BQ6DHV5 1058 aa13.44□□□□□ -0.26
SNX5-208ENST00000475716 NGEFQ8N5V2 710 aa13.44□□□□□ -0.26
SNX5-208ENST00000475716 GPRC5DQ9NZD1 345 aa13.44□□□□□ -0.26
SNX5-208ENST00000475716 TIMELESSQ9UNS1 1208 aa13.44□□□□□ -0.26
SNX5-208ENST00000475716 CEMIPQ8WUJ3 1361 aa13.44□□□□□ -0.26
SNX5-208ENST00000475716 ABCC12Q96J65 1359 aa13.44□□□□□ -0.26
SNX5-208ENST00000475716 HOXA10P31260 410 aaPredicted RBP13.43□□□□□ -0.26
SNX5-208ENST00000475716 CXCL9Q07325 125 aa13.43□□□□□ -0.26
SNX5-208ENST00000475716 C3orf67Q6ZVT6 689 aa13.43□□□□□ -0.26
SNX5-208ENST00000475716 NIM1KQ8IY84 436 aa13.43□□□□□ -0.26
SNX5-208ENST00000475716 PGAP2Q9UHJ9 254 aa13.43□□□□□ -0.26
SNX5-208ENST00000475716 PPIP5K2O43314 1243 aa13.42□□□□□ -0.26
SNX5-208ENST00000475716 GMPSP49915 693 aaPredicted RBP13.42□□□□□ -0.26
SNX5-208ENST00000475716 AOC3Q16853 763 aa13.42□□□□□ -0.26
SNX5-208ENST00000475716 MCM10Q7L590 875 aa13.42□□□□□ -0.26
SNX5-208ENST00000475716 RPGRQ92834 1020 aaKnown RBP13.42□□□□□ -0.26
SNX5-208ENST00000475716 HHIPL1Q96JK4 782 aa13.42□□□□□ -0.26
SNX5-208ENST00000475716 PDE4DIPQ5VU43 2346 aa13.42□□□□□ -0.26
SNX5-208ENST00000475716 BCORQ6W2J9 1755 aa13.41□□□□□ -0.26
SNX5-208ENST00000475716 SHTN1A0MZ66 631 aa13.41□□□□□ -0.26
SNX5-208ENST00000475716 PER1O15534 1290 aaPredicted RBP13.41□□□□□ -0.26
SNX5-208ENST00000475716 DCTN1Q14203 1278 aa13.41□□□□□ -0.26
SNX5-208ENST00000475716 SUSD4Q5VX71 490 aa13.41□□□□□ -0.26
SNX5-208ENST00000475716 USP48Q86UV5 1035 aa13.41□□□□□ -0.26
SNX5-208ENST00000475716 MIS18AQ9NYP9 233 aa13.41□□□□□ -0.26
SNX5-208ENST00000475716 NPC1L1Q9UHC9 1359 aa13.41□□□□□ -0.26
SNX5-208ENST00000475716 PPEF1O14829 653 aaPredicted RBP13.4□□□□□ -0.26
SNX5-208ENST00000475716 RGL2O15211 777 aa13.4□□□□□ -0.26
SNX5-208ENST00000475716 GPTP24298 496 aa13.4□□□□□ -0.26
SNX5-208ENST00000475716 TTLL7Q6ZT98 887 aa13.4□□□□□ -0.26
SNX5-208ENST00000475716 RBM17Q96I25 401 aaKnown RBP13.4□□□□□ -0.26
SNX5-208ENST00000475716 CRAMP1Q96RY5 1269 aa13.4□□□□□ -0.26
SNX5-208ENST00000475716 NYXQ9GZU5 481 aa13.4□□□□□ -0.26
SNX5-208ENST00000475716 RAD17O75943 681 aa13.39□□□□□ -0.27
SNX5-208ENST00000475716 PRKAR2BP31323 418 aa13.39□□□□□ -0.27
SNX5-208ENST00000475716 HUNKP57058 714 aa13.39□□□□□ -0.27
SNX5-208ENST00000475716 GRIPAP1Q4V328 841 aa13.39□□□□□ -0.27
SNX5-208ENST00000475716 TRPM4Q8TD43 1214 aa13.39□□□□□ -0.27
SNX5-208ENST00000475716 ZNRF3Q9ULT6 936 aa13.39□□□□□ -0.27
SNX5-208ENST00000475716 SIPA1L3O60292 1781 aaPredicted RBP13.39□□□□□ -0.27
SNX5-208ENST00000475716 TRPM7Q96QT4 1865 aa13.39□□□□□ -0.27
SNX5-208ENST00000475716 NOGQ13253 232 aa13.38□□□□□ -0.27
SNX5-208ENST00000475716 CDC37L1Q7L3B6 337 aa13.38□□□□□ -0.27
SNX5-208ENST00000475716 RSPH6AQ9H0K4 717 aa13.38□□□□□ -0.27
SNX5-208ENST00000475716 CNOT7Q9UIV1 285 aaKnown RBP13.38□□□□□ -0.27
SNX5-208ENST00000475716 RRP7AQ9Y3A4 280 aaKnown RBP13.38□□□□□ -0.27
SNX5-208ENST00000475716 UBN2Q6ZU65 1347 aa13.38□□□□□ -0.27
SNX5-208ENST00000475716 FAM155AB1AL88 458 aaPredicted RBP13.37□□□□□ -0.27
SNX5-208ENST00000475716 ERVV-1B6SEH8 477 aa13.37□□□□□ -0.27
SNX5-208ENST00000475716 TRPA1O75762 1119 aa13.37□□□□□ -0.27
SNX5-208ENST00000475716 KIF23Q02241 960 aaPredicted RBP13.37□□□□□ -0.27
SNX5-208ENST00000475716 ZC3H15Q8WU90 426 aaKnown RBP13.37□□□□□ -0.27
SNX5-208ENST00000475716 BCL2L13Q9BXK5 485 aa13.37□□□□□ -0.27
SNX5-208ENST00000475716 RNF186Q9NXI6 227 aa13.37□□□□□ -0.27
SNX5-208ENST00000475716 ATP6V0A2Q9Y487 856 aa13.37□□□□□ -0.27
SNX5-208ENST00000475716 KIF7Q2M1P5 1343 aa13.37□□□□□ -0.27
SNX5-208ENST00000475716 COL3A1P02461 1466 aaPredicted RBP13.36□□□□□ -0.27
SNX5-208ENST00000475716 ZBTB3Q9H5J0 574 aa13.36□□□□□ -0.27
SNX5-208ENST00000475716 MAP3K15Q6ZN16 1313 aa13.36□□□□□ -0.27
SNX5-208ENST00000475716 NTSR2O95665 410 aa13.35□□□□□ -0.27
SNX5-208ENST00000475716 PRPF38BQ5VTL8 546 aaKnown RBP13.35□□□□□ -0.27
SNX5-208ENST00000475716 RGMBQ6NW40 437 aa13.35□□□□□ -0.27
SNX5-208ENST00000475716 SAMD7Q7Z3H4 446 aa13.35□□□□□ -0.27
SNX5-208ENST00000475716 ZNF34Q8IZ26 560 aa13.35□□□□□ -0.27
SNX5-208ENST00000475716 RTF1Q92541 710 aaKnown RBP13.35□□□□□ -0.27
SNX5-208ENST00000475716 RTFDC1Q9BY42 306 aaPredicted RBP13.35□□□□□ -0.27
SNX5-208ENST00000475716 VPS33BQ9H267 617 aa13.35□□□□□ -0.27
SNX5-208ENST00000475716 ZBTB12Q9Y330 459 aaPredicted RBP13.35□□□□□ -0.27
SNX5-208ENST00000475716 YDJCA8MPS7 323 aa13.34□□□□□ -0.27
SNX5-208ENST00000475716 MYL6BP14649 208 aa13.34□□□□□ -0.27
SNX5-208ENST00000475716 TAF7Q15545 349 aaPredicted RBP13.34□□□□□ -0.27
SNX5-208ENST00000475716 H7C1D1 291 aa13.33□□□□□ -0.28
SNX5-208ENST00000475716 EGFRP00533 1210 aa13.33□□□□□ -0.28
SNX5-208ENST00000475716 ZNF157P51786 506 aaPredicted RBP13.33□□□□□ -0.28
SNX5-208ENST00000475716 TNIP1Q15025 636 aa13.33□□□□□ -0.28
SNX5-208ENST00000475716 DPP8Q6V1X1 898 aaPredicted RBP13.33□□□□□ -0.28
SNX5-208ENST00000475716 MICALL2Q8IY33 904 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms