RNA–Protein interactions for RNA: ENST00000475214.5

PCCB-213, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 2

Gene PCCB, Length 1,295 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-213ENST00000475214 FHDC1Q9C0D6 1143 aaPredicted RBP12.61□□□□□ -0.39
PCCB-213ENST00000475214 BCL11AQ9H165 835 aa12.61□□□□□ -0.39
PCCB-213ENST00000475214 BICC1Q9H694 974 aaKnown RBP12.61□□□□□ -0.39
PCCB-213ENST00000475214 UPF2Q9HAU5 1272 aaKnown RBP12.61□□□□□ -0.39
PCCB-213ENST00000475214 TJP1Q07157 1748 aa12.61□□□□□ -0.39
PCCB-213ENST00000475214 COL15A1P39059 1388 aa12.6□□□□□ -0.39
PCCB-213ENST00000475214 LOC102724428A0A0B4J2F2 783 aa12.6□□□□□ -0.39
PCCB-213ENST00000475214 IL6STP40189 918 aaPredicted RBP12.6□□□□□ -0.39
PCCB-213ENST00000475214 SIK1P57059 783 aa12.6□□□□□ -0.39
PCCB-213ENST00000475214 OS9Q13438 667 aaPredicted RBP12.6□□□□□ -0.39
PCCB-213ENST00000475214 ERC1Q8IUD2 1116 aa12.6□□□□□ -0.39
PCCB-213ENST00000475214 C16orf71Q8IYS4 520 aaPredicted RBP12.6□□□□□ -0.39
PCCB-213ENST00000475214 KIF1BPQ96EK5 621 aa12.6□□□□□ -0.39
PCCB-213ENST00000475214 ARXQ96QS3 562 aa12.6□□□□□ -0.39
PCCB-213ENST00000475214 TFCP2L1Q9NZI6 479 aa12.6□□□□□ -0.39
PCCB-213ENST00000475214 NOP58Q9Y2X3 529 aaKnown RBP12.6□□□□□ -0.39
PCCB-213ENST00000475214 PALLDQ8WX93 1383 aa12.59□□□□□ -0.39
PCCB-213ENST00000475214 EIF5BO60841 1220 aaKnown RBP12.59□□□□□ -0.39
PCCB-213ENST00000475214 TCIRG1Q13488 830 aa12.59□□□□□ -0.39
PCCB-213ENST00000475214 HSP90AB3PQ58FF7 597 aa12.59□□□□□ -0.39
PCCB-213ENST00000475214 TTC22Q5TAA0 569 aa12.59□□□□□ -0.39
PCCB-213ENST00000475214 UBE3BQ7Z3V4 1068 aa12.59□□□□□ -0.39
PCCB-213ENST00000475214 RHPN1Q8TCX5 695 aa12.59□□□□□ -0.39
PCCB-213ENST00000475214 AKT1S1Q96B36 256 aa12.59□□□□□ -0.39
PCCB-213ENST00000475214 KAZALD1Q96I82 304 aa12.59□□□□□ -0.39
PCCB-213ENST00000475214 LRRC4BQ9NT99 713 aa12.59□□□□□ -0.39
PCCB-213ENST00000475214 ZBTB1Q9Y2K1 713 aa12.59□□□□□ -0.39
PCCB-213ENST00000475214 MAP3K15Q6ZN16 1313 aa12.59□□□□□ -0.39
PCCB-213ENST00000475214 H7C1W4 665 aa12.58□□□□□ -0.4
PCCB-213ENST00000475214 POLD1P28340 1107 aa12.58□□□□□ -0.4
PCCB-213ENST00000475214 ISCA1Q9BUE6 129 aa12.58□□□□□ -0.4
PCCB-213ENST00000475214 OSBPL3Q9H4L5 887 aa12.58□□□□□ -0.4
PCCB-213ENST00000475214 CCDC87Q9NVE4 849 aa12.58□□□□□ -0.4
PCCB-213ENST00000475214 CCNL1Q9UK58 526 aaPredicted RBP12.58□□□□□ -0.4
PCCB-213ENST00000475214 CICQ96RK0 1608 aaPredicted RBP12.58□□□□□ -0.4
PCCB-213ENST00000475214 TRIM28Q13263 835 aaKnown RBP12.57□□□□□ -0.4
PCCB-213ENST00000475214 G3BP1Q13283 466 aaKnown RBP eCLIP12.57□□□□□ -0.42e-6■■■□□ 15.1
PCCB-213ENST00000475214 ZNF827Q17R98 1081 aa12.57□□□□□ -0.4
PCCB-213ENST00000475214 GIGYF2Q6Y7W6 1299 aaKnown RBP12.57□□□□□ -0.4
PCCB-213ENST00000475214 FLAD1Q8NFF5 587 aa12.57□□□□□ -0.4
PCCB-213ENST00000475214 OTUD7AQ8TE49 926 aaPredicted RBP12.57□□□□□ -0.4
PCCB-213ENST00000475214 DDRGK1Q96HY6 314 aa12.57□□□□□ -0.4
PCCB-213ENST00000475214 CHD4Q14839 1912 aa12.56□□□□□ -0.4
PCCB-213ENST00000475214 ERVV-1B6SEH8 477 aa12.56□□□□□ -0.4
PCCB-213ENST00000475214 CDC45O75419 566 aa12.56□□□□□ -0.4
PCCB-213ENST00000475214 SEC24BO95487 1268 aa12.56□□□□□ -0.4
PCCB-213ENST00000475214 MX1P20591 662 aa12.56□□□□□ -0.4
PCCB-213ENST00000475214 CRKLP46109 303 aaKnown RBP12.56□□□□□ -0.4
PCCB-213ENST00000475214 PDE1AP54750 535 aa12.56□□□□□ -0.4
PCCB-213ENST00000475214 CASP7P55210 303 aa12.56□□□□□ -0.4
PCCB-213ENST00000475214 RABL6Q3YEC7 729 aaPredicted RBP12.56□□□□□ -0.4
PCCB-213ENST00000475214 DZIP3Q86Y13 1208 aaKnown RBP12.56□□□□□ -0.4
PCCB-213ENST00000475214 CLASRPQ8N2M8 674 aaKnown RBP12.56□□□□□ -0.4
PCCB-213ENST00000475214 JARID2Q92833 1246 aaPredicted RBP12.56□□□□□ -0.4
PCCB-213ENST00000475214 AOX1Q06278 1338 aa12.56□□□□□ -0.4
PCCB-213ENST00000475214 ZNF831Q5JPB2 1677 aa12.55□□□□□ -0.4
PCCB-213ENST00000475214 GSPT1P15170 499 aaKnown RBP12.55□□□□□ -0.4
PCCB-213ENST00000475214 EIF5P55010 431 aaKnown RBP12.55□□□□□ -0.4
PCCB-213ENST00000475214 ITPK1Q13572 414 aa12.55□□□□□ -0.4
PCCB-213ENST00000475214 EPHA10Q5JZY3 1008 aa12.55□□□□□ -0.4
PCCB-213ENST00000475214 INTS5Q6P9B9 1019 aaKnown RBP12.55□□□□□ -0.4
PCCB-213ENST00000475214 IPO9Q96P70 1041 aaKnown RBP12.55□□□□□ -0.4
PCCB-213ENST00000475214 IL1RAPL2Q9NP60 686 aa12.55□□□□□ -0.4
PCCB-213ENST00000475214 STAP2Q9UGK3 403 aa12.55□□□□□ -0.4
PCCB-213ENST00000475214 SALL3Q9BXA9 1300 aa12.55□□□□□ -0.4
PCCB-213ENST00000475214 PCCAP05165 728 aaPredicted RBP12.54□□□□□ -0.4
PCCB-213ENST00000475214 CASC1Q6TDU7 716 aa12.54□□□□□ -0.4
PCCB-213ENST00000475214 COPRSQ9NQ92 184 aa12.54□□□□□ -0.4
PCCB-213ENST00000475214 PA2G4Q9UQ80 394 aaKnown RBP12.54□□□□□ -0.4
PCCB-213ENST00000475214 LY75O60449 1722 aa12.54□□□□□ -0.4
PCCB-213ENST00000475214 QSER1Q2KHR3 1735 aa12.54□□□□□ -0.4
PCCB-213ENST00000475214 MSH5O43196 834 aa12.53□□□□□ -0.4
PCCB-213ENST00000475214 MFAP1P55081 439 aaKnown RBP12.53□□□□□ -0.4
PCCB-213ENST00000475214 FOXO4P98177 505 aa12.53□□□□□ -0.4
PCCB-213ENST00000475214 HLFQ16534 295 aa12.53□□□□□ -0.4
PCCB-213ENST00000475214 LMBR1LQ6UX01 489 aa12.53□□□□□ -0.4
PCCB-213ENST00000475214 ZBTB38Q8NAP3 1195 aaPredicted RBP12.53□□□□□ -0.4
PCCB-213ENST00000475214 GPATCH3Q96I76 525 aa12.53□□□□□ -0.4
PCCB-213ENST00000475214 TBC1D2BQ9UPU7 963 aa12.53□□□□□ -0.4
PCCB-213ENST00000475214 PNPLA7Q6ZV29 1317 aa12.53□□□□□ -0.4
PCCB-213ENST00000475214 COL24A1Q17RW2 1714 aa12.53□□□□□ -0.4
PCCB-213ENST00000475214 ANKRD36CQ5JPF3 1778 aa12.53□□□□□ -0.4
PCCB-213ENST00000475214 COL5A3P25940 1745 aaPredicted RBP12.52□□□□□ -0.41
PCCB-213ENST00000475214 IFIT2P09913 472 aaKnown RBP12.52□□□□□ -0.41
PCCB-213ENST00000475214 SDSP20132 328 aa12.52□□□□□ -0.41
PCCB-213ENST00000475214 RTL5Q5HYW3 569 aaPredicted RBP12.52□□□□□ -0.41
PCCB-213ENST00000475214 TBC1D9Q6ZT07 1266 aa12.52□□□□□ -0.41
PCCB-213ENST00000475214 NUTM1Q86Y26 1132 aa12.52□□□□□ -0.41
PCCB-213ENST00000475214 CHMP3Q9Y3E7 222 aa12.52□□□□□ -0.41
PCCB-213ENST00000475214 NUP98P52948 1817 aa12.52□□□□□ -0.41
PCCB-213ENST00000475214 ERC2O15083 957 aa12.51□□□□□ -0.41
PCCB-213ENST00000475214 RFX5P48382 616 aaPredicted RBP12.51□□□□□ -0.41
PCCB-213ENST00000475214 KCNQ4P56696 695 aa12.51□□□□□ -0.41
PCCB-213ENST00000475214 C1QTNF8P60827 252 aa12.51□□□□□ -0.41
PCCB-213ENST00000475214 NLRP10Q86W26 655 aa12.51□□□□□ -0.41
PCCB-213ENST00000475214 TBC1D32Q96NH3 1257 aa12.51□□□□□ -0.41
PCCB-213ENST00000475214 PLA2G12BQ9BX93 195 aa12.51□□□□□ -0.41
PCCB-213ENST00000475214 SIL1Q9H173 461 aa12.51□□□□□ -0.41
PCCB-213ENST00000475214 TTC41PQ6P2S7 1318 aa12.51□□□□□ -0.41
PCCB-213ENST00000475214 CDHR2Q9BYE9 1310 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms