RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 ADGRL1O94910 1474 aa5.84□□□□□ -1.47
NPHP3-206ENST00000474871 SART3Q15020 963 aaKnown RBP5.84□□□□□ -1.47
NPHP3-206ENST00000474871 ZNF483Q8TF39 744 aaPredicted RBP5.84□□□□□ -1.47
NPHP3-206ENST00000474871 LCMT1Q9UIC8 334 aa5.84□□□□□ -1.47
NPHP3-206ENST00000474871 BARX2Q9UMQ3 279 aaPredicted RBP5.84□□□□□ -1.47
NPHP3-206ENST00000474871 SLC30A1Q9Y6M5 507 aa5.84□□□□□ -1.47
NPHP3-206ENST00000474871 EIF2AK4Q9P2K8 1649 aaKnown RBP5.84□□□□□ -1.47
NPHP3-206ENST00000474871 RPS6KA3P51812 740 aa5.84□□□□□ -1.47
NPHP3-206ENST00000474871 SMUG1Q53HV7 270 aa5.84□□□□□ -1.47
NPHP3-206ENST00000474871 USP33Q8TEY7 942 aa5.84□□□□□ -1.47
NPHP3-206ENST00000474871 NLRP1Q9C000 1473 aa5.84□□□□□ -1.48
NPHP3-206ENST00000474871 KDRP35968 1356 aa5.84□□□□□ -1.48
NPHP3-206ENST00000474871 A0A0G2JS52 829 aa5.84□□□□□ -1.48
NPHP3-206ENST00000474871 CSB-PGBD3P0DP91 1061 aa5.84□□□□□ -1.48
NPHP3-206ENST00000474871 JAKMIP3Q5VZ66 844 aa5.84□□□□□ -1.48
NPHP3-206ENST00000474871 FAM117BQ6P1L5 589 aa5.84□□□□□ -1.48
NPHP3-206ENST00000474871 CTR9Q6PD62 1173 aa5.84□□□□□ -1.48
NPHP3-206ENST00000474871 PACS2Q86VP3 889 aa5.84□□□□□ -1.48
NPHP3-206ENST00000474871 SWAP70Q9UH65 585 aa5.84□□□□□ -1.48
NPHP3-206ENST00000474871 MAP3K4Q9Y6R4 1608 aa5.83□□□□□ -1.48
NPHP3-206ENST00000474871 RTN2O75298 545 aa5.83□□□□□ -1.48
NPHP3-206ENST00000474871 PRIM1P49642 420 aaKnown RBP5.83□□□□□ -1.48
NPHP3-206ENST00000474871 AKNAD1Q5T1N1 836 aa5.83□□□□□ -1.48
NPHP3-206ENST00000474871 SOGA3Q5TF21 947 aa5.83□□□□□ -1.48
NPHP3-206ENST00000474871 WDR78Q5VTH9 848 aa5.83□□□□□ -1.48
NPHP3-206ENST00000474871 ALDH8A1Q9H2A2 487 aaPredicted RBP5.83□□□□□ -1.48
NPHP3-206ENST00000474871 CHPF2Q9P2E5 772 aa5.83□□□□□ -1.48
NPHP3-206ENST00000474871 CARNS1A5YM72 827 aa5.83□□□□□ -1.48
NPHP3-206ENST00000474871 PDE6BP35913 854 aa5.83□□□□□ -1.48
NPHP3-206ENST00000474871 SH3TC2Q8TF17 1288 aa5.83□□□□□ -1.48
NPHP3-206ENST00000474871 BACH2Q9BYV9 841 aa5.83□□□□□ -1.48
NPHP3-206ENST00000474871 OSBPL5Q9H0X9 879 aaPredicted RBP5.83□□□□□ -1.48
NPHP3-206ENST00000474871 TMX4Q9H1E5 349 aaPredicted RBP5.83□□□□□ -1.48
NPHP3-206ENST00000474871 TMEM110-MUSTN1A8MSY1 372 aa5.83□□□□□ -1.48
NPHP3-206ENST00000474871 EIF3FO00303 357 aaPredicted RBP5.83□□□□□ -1.48
NPHP3-206ENST00000474871 PES1O00541 588 aaKnown RBP5.83□□□□□ -1.48
NPHP3-206ENST00000474871 TSPAN7P41732 249 aa5.83□□□□□ -1.48
NPHP3-206ENST00000474871 HSP90AB2PQ58FF8 381 aa5.83□□□□□ -1.48
NPHP3-206ENST00000474871 LDLRAD1Q5T700 205 aa5.83□□□□□ -1.48
NPHP3-206ENST00000474871 NAIF1Q69YI7 327 aaPredicted RBP5.83□□□□□ -1.48
NPHP3-206ENST00000474871 IQCEQ6IPM2 695 aa5.83□□□□□ -1.48
NPHP3-206ENST00000474871 LILRB2Q8N423 598 aa5.83□□□□□ -1.48
NPHP3-206ENST00000474871 C17orf50Q8WW18 174 aa5.83□□□□□ -1.48
NPHP3-206ENST00000474871 SPACA7Q96KW9 195 aa5.83□□□□□ -1.48
NPHP3-206ENST00000474871 KNSTRNQ9Y448 316 aa5.83□□□□□ -1.48
NPHP3-206ENST00000474871 KDM5CP41229 1560 aa5.82□□□□□ -1.48
NPHP3-206ENST00000474871 PYGBP11216 843 aa5.82□□□□□ -1.48
NPHP3-206ENST00000474871 TCF3P15923 654 aa5.82□□□□□ -1.48
NPHP3-206ENST00000474871 L3MBTL2Q969R5 705 aa5.82□□□□□ -1.48
NPHP3-206ENST00000474871 VEZTQ9HBM0 779 aa5.82□□□□□ -1.48
NPHP3-206ENST00000474871 CHST12Q9NRB3 414 aa5.82□□□□□ -1.48
NPHP3-206ENST00000474871 MECOMQ03112 1051 aa5.82□□□□□ -1.48
NPHP3-206ENST00000474871 CHAF1AQ13111 956 aaPredicted RBP5.82□□□□□ -1.48
NPHP3-206ENST00000474871 ANKRD13DQ6ZTN6 518 aa5.82□□□□□ -1.48
NPHP3-206ENST00000474871 KIAA1958Q8N8K9 716 aa5.82□□□□□ -1.48
NPHP3-206ENST00000474871 SLC16A10Q8TF71 515 aa5.82□□□□□ -1.48
NPHP3-206ENST00000474871 SLC7A5P2Q9GIP4 190 aa5.82□□□□□ -1.48
NPHP3-206ENST00000474871 SENP2Q9HC62 589 aa5.82□□□□□ -1.48
NPHP3-206ENST00000474871 KIDINS220Q9ULH0 1771 aa5.82□□□□□ -1.48
NPHP3-206ENST00000474871 POGZQ7Z3K3 1410 aa5.82□□□□□ -1.48
NPHP3-206ENST00000474871 RGS20O76081 388 aa5.82□□□□□ -1.48
NPHP3-206ENST00000474871 TMEM62Q0P6H9 643 aa5.82□□□□□ -1.48
NPHP3-206ENST00000474871 PSMD2Q13200 908 aa5.82□□□□□ -1.48
NPHP3-206ENST00000474871 GJC2Q5T442 439 aaPredicted RBP5.82□□□□□ -1.48
NPHP3-206ENST00000474871 PDXDC1Q6P996 788 aa5.82□□□□□ -1.48
NPHP3-206ENST00000474871 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.82□□□□□ -1.48
NPHP3-206ENST00000474871 ZSCAN30Q86W11 494 aa5.82□□□□□ -1.48
NPHP3-206ENST00000474871 MYLK4Q86YV6 388 aaPredicted RBP5.82□□□□□ -1.48
NPHP3-206ENST00000474871 CLIP3Q96DZ5 547 aa5.82□□□□□ -1.48
NPHP3-206ENST00000474871 VPS33BQ9H267 617 aa5.82□□□□□ -1.48
NPHP3-206ENST00000474871 IFT122Q9HBG6 1241 aa5.82□□□□□ -1.48
NPHP3-206ENST00000474871 RABL2AQ9UBK7 228 aaPredicted RBP5.82□□□□□ -1.48
NPHP3-206ENST00000474871 POLR1AO95602 1720 aaPredicted RBP5.82□□□□□ -1.48
NPHP3-206ENST00000474871 FMNL1O95466 1100 aaPredicted RBP5.82□□□□□ -1.48
NPHP3-206ENST00000474871 CENPOQ9BU64 300 aa5.82□□□□□ -1.48
NPHP3-206ENST00000474871 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.82□□□□□ -1.48
NPHP3-206ENST00000474871 TIMM22Q9Y584 194 aa5.82□□□□□ -1.48
NPHP3-206ENST00000474871 VWDEQ8N2E2 1590 aa5.81□□□□□ -1.48
NPHP3-206ENST00000474871 E9PCH4 1651 aa5.81□□□□□ -1.48
NPHP3-206ENST00000474871 ERICH4A6NGS2 130 aa5.81□□□□□ -1.48
NPHP3-206ENST00000474871 MYCLP1P12525 358 aaPredicted RBP5.81□□□□□ -1.48
NPHP3-206ENST00000474871 HOXC13P31276 330 aa5.81□□□□□ -1.48
NPHP3-206ENST00000474871 CASQ1P31415 396 aa5.81□□□□□ -1.48
NPHP3-206ENST00000474871 PDE4BQ07343 736 aa5.81□□□□□ -1.48
NPHP3-206ENST00000474871 ZNF518AQ6AHZ1 1483 aa5.81□□□□□ -1.48
NPHP3-206ENST00000474871 MROH1Q8NDA8 1641 aa5.81□□□□□ -1.48
NPHP3-206ENST00000474871 MYRIPQ8NFW9 859 aa5.81□□□□□ -1.48
NPHP3-206ENST00000474871 LILRB1Q8NHL6 650 aaPredicted RBP5.81□□□□□ -1.48
NPHP3-206ENST00000474871 TEKT1Q969V4 418 aa5.81□□□□□ -1.48
NPHP3-206ENST00000474871 ANTXR1Q9H6X2 564 aa5.81□□□□□ -1.48
NPHP3-206ENST00000474871 PRDM15P57071 1507 aaPredicted RBP5.81□□□□□ -1.48
NPHP3-206ENST00000474871 SCAPERQ9BY12 1400 aa5.81□□□□□ -1.48
NPHP3-206ENST00000474871 SOS1Q07889 1333 aaPredicted RBP5.81□□□□□ -1.48
NPHP3-206ENST00000474871 BICDL2A1A5D9 508 aa5.81□□□□□ -1.48
NPHP3-206ENST00000474871 XBP1P17861 261 aa5.81□□□□□ -1.48
NPHP3-206ENST00000474871 PPP2R5BQ15173 497 aa5.81□□□□□ -1.48
NPHP3-206ENST00000474871 HSP90B2PQ58FF3 399 aa5.81□□□□□ -1.48
NPHP3-206ENST00000474871 SREK1Q8WXA9 508 aaKnown RBP5.81□□□□□ -1.48
NPHP3-206ENST00000474871 IL17RAQ96F46 866 aa5.81□□□□□ -1.48
NPHP3-206ENST00000474871 SCINQ9Y6U3 715 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms