RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 NID2Q14112 1375 aa4.94□□□□□ -1.62
USP16-205ENST00000474835 DISP2A7MBM2 1401 aa4.94□□□□□ -1.62
USP16-205ENST00000474835 FYB1O15117 783 aa4.94□□□□□ -1.62
USP16-205ENST00000474835 TUBB4AP04350 444 aa4.94□□□□□ -1.62
USP16-205ENST00000474835 AARSP49588 968 aaKnown RBP eCLIP4.94□□□□□ -1.62
USP16-205ENST00000474835 MKRN4PQ13434 485 aaPredicted RBP4.94□□□□□ -1.62
USP16-205ENST00000474835 GRIPAP1Q4V328 841 aa4.94□□□□□ -1.62
USP16-205ENST00000474835 RUFY3Q7L099 469 aa4.94□□□□□ -1.62
USP16-205ENST00000474835 LRRC8AQ8IWT6 810 aa4.94□□□□□ -1.62
USP16-205ENST00000474835 KRT222Q8N1A0 295 aa4.94□□□□□ -1.62
USP16-205ENST00000474835 CACTINQ8WUQ7 758 aaKnown RBP4.94□□□□□ -1.62
USP16-205ENST00000474835 FUT8Q9BYC5 575 aa4.94□□□□□ -1.62
USP16-205ENST00000474835 ST7Q9NRC1 585 aa4.94□□□□□ -1.62
USP16-205ENST00000474835 EXOC6BQ9Y2D4 811 aa4.94□□□□□ -1.62
USP16-205ENST00000474835 PSDA5PKW4 1024 aaPredicted RBP4.94□□□□□ -1.62
USP16-205ENST00000474835 FNTAP49354 379 aa4.94□□□□□ -1.62
USP16-205ENST00000474835 USPL1Q5W0Q7 1092 aa4.94□□□□□ -1.62
USP16-205ENST00000474835 OTUD7AQ8TE49 926 aaPredicted RBP4.94□□□□□ -1.62
USP16-205ENST00000474835 SECISBP2LQ93073 1101 aaKnown RBP4.94□□□□□ -1.62
USP16-205ENST00000474835 ZFP91Q96JP5 570 aaPredicted RBP4.94□□□□□ -1.62
USP16-205ENST00000474835 HYPKQ9NX55 129 aa4.94□□□□□ -1.62
USP16-205ENST00000474835 CHL1O00533 1208 aa4.93□□□□□ -1.62
USP16-205ENST00000474835 RTN2O75298 545 aa4.93□□□□□ -1.62
USP16-205ENST00000474835 MTHFSP49914 203 aa4.93□□□□□ -1.62
USP16-205ENST00000474835 DDR1Q08345 913 aa4.93□□□□□ -1.62
USP16-205ENST00000474835 NCAPHQ15003 741 aa4.93□□□□□ -1.62
USP16-205ENST00000474835 MYH3P11055 1940 aa4.93□□□□□ -1.62
USP16-205ENST00000474835 A0A0U1RQG5 324 aaPredicted RBP4.93□□□□□ -1.62
USP16-205ENST00000474835 UTYO14607 1347 aa4.93□□□□□ -1.62
USP16-205ENST00000474835 PRPF40AO75400 957 aaKnown RBP4.93□□□□□ -1.62
USP16-205ENST00000474835 CHAF1AQ13111 956 aaPredicted RBP4.93□□□□□ -1.62
USP16-205ENST00000474835 RPAP2Q8IXW5 612 aaPredicted RBP4.93□□□□□ -1.62
USP16-205ENST00000474835 ELOA2Q8IYF1 753 aaPredicted RBP4.93□□□□□ -1.62
USP16-205ENST00000474835 TSPYL6Q8N831 410 aa4.93□□□□□ -1.62
USP16-205ENST00000474835 MSANTD4Q8NCY6 345 aa4.93□□□□□ -1.62
USP16-205ENST00000474835 DIAPH3Q9NSV4 1193 aa4.93□□□□□ -1.62
USP16-205ENST00000474835 MYH6P13533 1939 aa4.93□□□□□ -1.62
USP16-205ENST00000474835 NRAPQ86VF7 1730 aa4.93□□□□□ -1.62
USP16-205ENST00000474835 KCNV1Q6PIU1 500 aa4.93□□□□□ -1.62
USP16-205ENST00000474835 ZNF572Q7Z3I7 529 aaPredicted RBP4.93□□□□□ -1.62
USP16-205ENST00000474835 PACS2Q86VP3 889 aa4.93□□□□□ -1.62
USP16-205ENST00000474835 CCAR2Q8N163 923 aaKnown RBP4.93□□□□□ -1.62
USP16-205ENST00000474835 FBXO18Q8NFZ0 1043 aa4.93□□□□□ -1.62
USP16-205ENST00000474835 NCAPGQ9BPX3 1015 aa4.93□□□□□ -1.62
USP16-205ENST00000474835 CALCOCO1Q9P1Z2 691 aa4.93□□□□□ -1.62
USP16-205ENST00000474835 ORC3Q9UBD5 711 aaPredicted RBP4.93□□□□□ -1.62
USP16-205ENST00000474835 ZNF777Q9ULD5 760 aaPredicted RBP4.93□□□□□ -1.62
USP16-205ENST00000474835 PARP3Q9Y6F1 533 aa4.93□□□□□ -1.62
USP16-205ENST00000474835 KIF13AQ9H1H9 1805 aa4.93□□□□□ -1.62
USP16-205ENST00000474835 ZSCAN22P10073 491 aaPredicted RBP4.92□□□□□ -1.62
USP16-205ENST00000474835 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.92□□□□□ -1.62
USP16-205ENST00000474835 TSR2Q969E8 191 aaKnown RBP4.92□□□□□ -1.62
USP16-205ENST00000474835 ZSWIM6Q9HCJ5 1215 aa4.92□□□□□ -1.62
USP16-205ENST00000474835 MED4Q9NPJ6 270 aa4.92□□□□□ -1.62
USP16-205ENST00000474835 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.92□□□□□ -1.62
USP16-205ENST00000474835 TANC1Q9C0D5 1861 aa4.92□□□□□ -1.62
USP16-205ENST00000474835 FOCADQ5VW36 1801 aa4.92□□□□□ -1.62
USP16-205ENST00000474835 COL24A1Q17RW2 1714 aa4.92□□□□□ -1.62
USP16-205ENST00000474835 CLCN6P51797 869 aa4.92□□□□□ -1.62
USP16-205ENST00000474835 PDE1AP54750 535 aa4.92□□□□□ -1.62
USP16-205ENST00000474835 EVCP57679 992 aa4.92□□□□□ -1.62
USP16-205ENST00000474835 MTX1Q13505 466 aa4.92□□□□□ -1.62
USP16-205ENST00000474835 COL9A3Q14050 684 aaPredicted RBP4.92□□□□□ -1.62
USP16-205ENST00000474835 BMS1Q14692 1282 aaKnown RBP4.92□□□□□ -1.62
USP16-205ENST00000474835 ILDR1Q86SU0 546 aaPredicted RBP4.92□□□□□ -1.62
USP16-205ENST00000474835 CEP89Q96ST8 783 aa4.92□□□□□ -1.62
USP16-205ENST00000474835 KCNG1Q9UIX4 513 aa4.92□□□□□ -1.62
USP16-205ENST00000474835 CAVIN2O95810 425 aa4.92□□□□□ -1.62
USP16-205ENST00000474835 F13A1P00488 732 aa4.92□□□□□ -1.62
USP16-205ENST00000474835 CORO7P57737 925 aa4.92□□□□□ -1.62
USP16-205ENST00000474835 CT47A1Q5JQC4 288 aaPredicted RBP4.92□□□□□ -1.62
USP16-205ENST00000474835 CFAP70Q5T0N1 1121 aa4.92□□□□□ -1.62
USP16-205ENST00000474835 WLSQ5T9L3 541 aa4.92□□□□□ -1.62
USP16-205ENST00000474835 RNF20Q5VTR2 975 aa4.92□□□□□ -1.62
USP16-205ENST00000474835 TLDC1Q6P9B6 456 aa4.92□□□□□ -1.62
USP16-205ENST00000474835 FAM200AQ8TCP9 573 aa4.92□□□□□ -1.62
USP16-205ENST00000474835 STAG1Q8WVM7 1258 aa4.92□□□□□ -1.62
USP16-205ENST00000474835 EXOC4Q96A65 974 aa4.92□□□□□ -1.62
USP16-205ENST00000474835 FAM163AQ96GL9 167 aaPredicted RBP4.92□□□□□ -1.62
USP16-205ENST00000474835 CDK5RAP2Q96SN8 1893 aa4.92□□□□□ -1.62
USP16-205ENST00000474835 MAP3K9P80192 1104 aa4.91□□□□□ -1.62
USP16-205ENST00000474835 NECTIN1Q15223 517 aa4.91□□□□□ -1.62
USP16-205ENST00000474835 TICAM2Q86XR7 235 aa4.91□□□□□ -1.62
USP16-205ENST00000474835 CLSTN2Q9H4D0 955 aa4.91□□□□□ -1.62
USP16-205ENST00000474835 MBIPQ9NS73 344 aa4.91□□□□□ -1.62
USP16-205ENST00000474835 DONSONQ9NYP3 566 aa4.91□□□□□ -1.62
USP16-205ENST00000474835 NHSQ6T4R5 1651 aa4.91□□□□□ -1.62
USP16-205ENST00000474835 ZNF646O15015 1829 aaPredicted RBP4.91□□□□□ -1.62
USP16-205ENST00000474835 ABCA3Q99758 1704 aa4.91□□□□□ -1.62
USP16-205ENST00000474835 LARGE1O95461 756 aa4.91□□□□□ -1.62
USP16-205ENST00000474835 ATP2B1P20020 1258 aa4.91□□□□□ -1.62
USP16-205ENST00000474835 CTR9Q6PD62 1173 aa4.91□□□□□ -1.62
USP16-205ENST00000474835 APTXQ7Z2E3 356 aaKnown RBP4.91□□□□□ -1.62
USP16-205ENST00000474835 C16orf71Q8IYS4 520 aaPredicted RBP4.91□□□□□ -1.62
USP16-205ENST00000474835 SMARCC2Q8TAQ2 1214 aa4.91□□□□□ -1.62
USP16-205ENST00000474835 FAXDC2Q96IV6 333 aa4.91□□□□□ -1.62
USP16-205ENST00000474835 PGBD1Q96JS3 809 aa4.91□□□□□ -1.62
USP16-205ENST00000474835 SLX1AQ9BQ83 275 aa4.91□□□□□ -1.62
USP16-205ENST00000474835 TACO1Q9BSH4 297 aaKnown RBP4.91□□□□□ -1.62
USP16-205ENST00000474835 H3BQF6 201 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms