RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 MEX3CQ5U5Q3 659 aaKnown RBP22.12■■□□□ 1.13
VARS2-206ENST00000473916 RBM25P49756 843 aaKnown RBP22.11■■□□□ 1.13
VARS2-206ENST00000473916 G3BP1Q13283 466 aaKnown RBP eCLIP22.11■■□□□ 1.13
VARS2-206ENST00000473916 RILPL2Q969X0 211 aa22.11■■□□□ 1.13
VARS2-206ENST00000473916 TRIM6-TRIM34B2RNG4 842 aa22.11■■□□□ 1.13
VARS2-206ENST00000473916 PTPN12Q05209 780 aaKnown RBP22.11■■□□□ 1.13
VARS2-206ENST00000473916 AOX1Q06278 1338 aa22.1■■□□□ 1.13
VARS2-206ENST00000473916 GPTP24298 496 aa22.1■■□□□ 1.13
VARS2-206ENST00000473916 INTS5Q6P9B9 1019 aaKnown RBP22.1■■□□□ 1.13
VARS2-206ENST00000473916 ERC1Q8IUD2 1116 aa22.1■■□□□ 1.13
VARS2-206ENST00000473916 CLASRPQ8N2M8 674 aaKnown RBP22.1■■□□□ 1.13
VARS2-206ENST00000473916 TBC1D2BQ9UPU7 963 aa22.1■■□□□ 1.13
VARS2-206ENST00000473916 AACSQ86V21 672 aa22.09■■□□□ 1.13
VARS2-206ENST00000473916 TLR7Q9NYK1 1049 aaKnown RBP22.09■■□□□ 1.13
VARS2-206ENST00000473916 CHMP3Q9Y3E7 222 aa22.09■■□□□ 1.13
VARS2-206ENST00000473916 AFF2P51816 1311 aa22.09■■□□□ 1.13
VARS2-206ENST00000473916 RREB1Q92766 1687 aa22.09■■□□□ 1.13
VARS2-206ENST00000473916 CRKLP46109 303 aaKnown RBP22.09■■□□□ 1.13
VARS2-206ENST00000473916 GIGYF2Q6Y7W6 1299 aaKnown RBP22.09■■□□□ 1.13
VARS2-206ENST00000473916 SYNE4Q8N205 404 aa22.09■■□□□ 1.13
VARS2-206ENST00000473916 EAF2Q96CJ1 260 aaPredicted RBP22.09■■□□□ 1.13
VARS2-206ENST00000473916 CICQ96RK0 1608 aaPredicted RBP22.08■■□□□ 1.13
VARS2-206ENST00000473916 COL5A3P25940 1745 aaPredicted RBP22.08■■□□□ 1.13
VARS2-206ENST00000473916 KCNQ4P56696 695 aa22.08■■□□□ 1.13
VARS2-206ENST00000473916 KIF2CQ99661 725 aa22.08■■□□□ 1.13
VARS2-206ENST00000473916 COPRSQ9NQ92 184 aa22.08■■□□□ 1.13
VARS2-206ENST00000473916 DAXXQ9UER7 740 aaPredicted RBP22.08■■□□□ 1.13
VARS2-206ENST00000473916 FAM89AQ96GI7 184 aa22.07■■□□□ 1.12
VARS2-206ENST00000473916 IL6STP40189 918 aaPredicted RBP22.07■■□□□ 1.12
VARS2-206ENST00000473916 DZIP3Q86Y13 1208 aaKnown RBP22.07■■□□□ 1.12
VARS2-206ENST00000473916 TBC1D2Q9BYX2 928 aa22.07■■□□□ 1.12
VARS2-206ENST00000473916 CCDC8Q9H0W5 538 aaPredicted RBP22.07■■□□□ 1.12
VARS2-206ENST00000473916 USP42Q9H9J4 1324 aaKnown RBP22.07■■□□□ 1.12
VARS2-206ENST00000473916 BTAF1O14981 1849 aa22.06■■□□□ 1.12
VARS2-206ENST00000473916 CCDC87Q9NVE4 849 aa22.06■■□□□ 1.12
VARS2-206ENST00000473916 IFIT2P09913 472 aaKnown RBP22.06■■□□□ 1.12
VARS2-206ENST00000473916 ANP32EQ9BTT0 268 aa22.06■■□□□ 1.12
VARS2-206ENST00000473916 EIF5P55010 431 aaKnown RBP22.05■■□□□ 1.12
VARS2-206ENST00000473916 TRIM28Q13263 835 aaKnown RBP22.05■■□□□ 1.12
VARS2-206ENST00000473916 CASC1Q6TDU7 716 aa22.05■■□□□ 1.12
VARS2-206ENST00000473916 CHMLP26374 656 aa22.04■■□□□ 1.12
VARS2-206ENST00000473916 NLRP10Q86W26 655 aa22.04■■□□□ 1.12
VARS2-206ENST00000473916 GJD4Q96KN9 370 aaPredicted RBP22.04■■□□□ 1.12
VARS2-206ENST00000473916 USP26Q9BXU7 913 aa22.04■■□□□ 1.12
VARS2-206ENST00000473916 EP400Q96L91 3159 aa22.04■■□□□ 1.12
VARS2-206ENST00000473916 TFCP2Q12800 502 aa22.04■■□□□ 1.12
VARS2-206ENST00000473916 ZNF594Q96JF6 807 aaPredicted RBP22.04■■□□□ 1.12
VARS2-206ENST00000473916 CCDC85AQ96PX6 553 aaPredicted RBP22.04■■□□□ 1.12
VARS2-206ENST00000473916 IL25Q9H293 177 aa22.04■■□□□ 1.12
VARS2-206ENST00000473916 ECHDC1Q9NTX5 307 aa22.03■■□□□ 1.12
VARS2-206ENST00000473916 TTC41PQ6P2S7 1318 aa22.03■■□□□ 1.12
VARS2-206ENST00000473916 PCCAP05165 728 aaPredicted RBP22.02■■□□□ 1.12
VARS2-206ENST00000473916 UBN2Q6ZU65 1347 aa22.02■■□□□ 1.12
VARS2-206ENST00000473916 NHSQ6T4R5 1651 aa22.02■■□□□ 1.12
VARS2-206ENST00000473916 ZBTB38Q8NAP3 1195 aaPredicted RBP22.02■■□□□ 1.12
VARS2-206ENST00000473916 SMARCC1Q92922 1105 aaPredicted RBP22.02■■□□□ 1.12
VARS2-206ENST00000473916 ESYT1Q9BSJ8 1104 aa22.02■■□□□ 1.12
VARS2-206ENST00000473916 SBF2Q86WG5 1849 aa22.02■■□□□ 1.11
VARS2-206ENST00000473916 MYH3P11055 1940 aa22.01■■□□□ 1.11
VARS2-206ENST00000473916 ERC2O15083 957 aa22.01■■□□□ 1.11
VARS2-206ENST00000473916 BECN1Q14457 450 aa22.01■■□□□ 1.11
VARS2-206ENST00000473916 LINC00116Q8NCU8 138 aa22.01■■□□□ 1.11
VARS2-206ENST00000473916 GLRX3O76003 335 aaKnown RBP22.01■■□□□ 1.11
VARS2-206ENST00000473916 ATG9AQ7Z3C6 839 aa22.01■■□□□ 1.11
VARS2-206ENST00000473916 ATRNO75882 1429 aa22■■□□□ 1.11
VARS2-206ENST00000473916 ZNF831Q5JPB2 1677 aa22■■□□□ 1.11
VARS2-206ENST00000473916 ERVV-1B6SEH8 477 aa21.99■■□□□ 1.11
VARS2-206ENST00000473916 LRRC24Q50LG9 513 aa21.99■■□□□ 1.11
VARS2-206ENST00000473916 SMIM5Q71RC9 77 aa21.99■■□□□ 1.11
VARS2-206ENST00000473916 TNNI3KQ59H18 835 aa21.99■■□□□ 1.11
VARS2-206ENST00000473916 PUS3Q9BZE2 481 aaKnown RBP21.99■■□□□ 1.11
VARS2-206ENST00000473916 DBNLQ9UJU6 430 aaKnown RBP21.99■■□□□ 1.11
VARS2-206ENST00000473916 FPGT-TNNI3KV9GXZ4 949 aa21.99■■□□□ 1.11
VARS2-206ENST00000473916 HSP90AB3PQ58FF7 597 aa21.98■■□□□ 1.11
VARS2-206ENST00000473916 CAMTA2O94983 1202 aa21.97■■□□□ 1.11
VARS2-206ENST00000473916 CD2BP2O95400 341 aaKnown RBP21.97■■□□□ 1.11
VARS2-206ENST00000473916 ZNF34Q8IZ26 560 aa21.97■■□□□ 1.11
VARS2-206ENST00000473916 CNTROBQ8N137 903 aa21.97■■□□□ 1.11
VARS2-206ENST00000473916 GPATCH3Q96I76 525 aa21.97■■□□□ 1.11
VARS2-206ENST00000473916 REC8O95072 547 aa21.97■■□□□ 1.11
VARS2-206ENST00000473916 SPRYD3Q8NCJ5 442 aa21.97■■□□□ 1.11
VARS2-206ENST00000473916 TRMT112Q9UI30 125 aaKnown RBP21.97■■□□□ 1.11
VARS2-206ENST00000473916 BCORQ6W2J9 1755 aa21.96■■□□□ 1.11
VARS2-206ENST00000473916 PLA2G12BQ9BX93 195 aa21.96■■□□□ 1.11
VARS2-206ENST00000473916 FAM177BA6PVY3 158 aa21.96■■□□□ 1.11
VARS2-206ENST00000473916 SEPT12Q8IYM1 358 aa21.96■■□□□ 1.11
VARS2-206ENST00000473916 DBNDD2Q9BQY9 259 aa21.96■■□□□ 1.11
VARS2-206ENST00000473916 BOLA2Q9H3K6 86 aa21.96■■□□□ 1.11
VARS2-206ENST00000473916 CDHR2Q9BYE9 1310 aa21.95■■□□□ 1.1
VARS2-206ENST00000473916 SLKQ9H2G2 1235 aaPredicted RBP21.95■■□□□ 1.1
VARS2-206ENST00000473916 TRPC5Q9UL62 973 aaPredicted RBP21.95■■□□□ 1.1
VARS2-206ENST00000473916 NBR1Q14596 966 aa21.94■■□□□ 1.1
VARS2-206ENST00000473916 EYA2O00167 538 aa21.94■■□□□ 1.1
VARS2-206ENST00000473916 IRS4O14654 1257 aaPredicted RBP21.94■■□□□ 1.1
VARS2-206ENST00000473916 CSF1RP07333 972 aa21.94■■□□□ 1.1
VARS2-206ENST00000473916 SUSD4Q5VX71 490 aa21.94■■□□□ 1.1
VARS2-206ENST00000473916 ANO2Q9NQ90 1003 aa21.94■■□□□ 1.1
VARS2-206ENST00000473916 NDUFB9Q9Y6M9 179 aa21.94■■□□□ 1.1
VARS2-206ENST00000473916 CCDC57Q2TAC2 916 aa21.93■■□□□ 1.1
VARS2-206ENST00000473916 EDC3Q96F86 508 aaKnown RBP21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms